|
|
Homology
BLAST of mRNA_Ecto-sp13_S_contig5612.15946.1 vs. uniprot
Match: A0A6H5JGI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGI3_9PHAE) HSP 1 Score: 677 bits (1748), Expect = 4.640e-210 Identity = 629/1024 (61.43%), Postives = 649/1024 (63.38%), Query Frame = 1
Query: 448 DLTVVPSGLMRLPPPLSLEKAKELQRRSSSXXXADGSSGLLGFADEGXXXXXXXXSGVVPAVESSRMPTAIDGPTAAAAMAAGWKCSGKHGAAFAVVVAXXXXXXXXXXXXXXXXXXXXXXXRRPHSIDWTGAPQVVPATTALPDVDVTPLCTPLNAVRCGAGATAVEMPWPPTAAAGRLSRENHRQVG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PSPARLERLQIARQPLERRPSPEQGDSQKEGGSAESSDXXXXXXXXPEEGSLEEADCRDYLRGGCFPPKRGGAAVNTVAEGTERANATEGTEEEKAAAVAGVSXXXXXXXXXXXXXXQLEHAGHGQRQEWQRRPPP--VGVGGEELELLDAREVLGAEGFDVENSPVSLAGRLAVQQLSARSLARRKNSLSGPGGLAGWAXXXXXXXXTPGNAFRLHSAGVSSRRRGSGDGRVDDEDGFSTAREATNGGGQS-KFFCLDRGSSWRSVAESIGSCGGGGRGIAAAVVAAYDGSVADSDADSSTAGVATGGGRTQRARFY------TAEDDAEKKLIAEQIEALRSGGDDTAAQLLPVRAAXXXXXXXXXXXVATAARGLTSVADSKIASFVTTLSGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGENDGEXXXXXXXXXAKAXXXXXXXXXGGGLASDFFAEAVLEEFTVDHGEGAAEAAATPATPAXXXXXXXXXXXAAPDPLPRRKDKRRSSWEAFTFSKGVFQLASPGNAAAAGGVNLGSGALTGTGVPVXPPPGICLVDQAKELQARRKYEVSLSEKALAKEKTRSGSGEQHGRAVPEAAS 2961
DLTVVPSGLMRLPPPLSLEKAKELQRRSSS ADGSSGLLGFADEG S VVPAVESSRMPTAIDGPTAAAAMAAGWKCSGK GAAFAVV XXXXXXXXXXXXXXXXX RRPHSIDWTGAPQVVPATTALPDVDVTPLCTPLNAVRCGAGATA EMPWP AA RL RE+HRQVG +P RL LQ ARQPLERRP+PEQ +S+KEGGSAE XXXXXXX PEEGS +EA+ RDY RG CFPP+RG VNTV GTERANAT+GTEE++AAA XXXXXXXXXXXXXX VGVGGEELELLDAREVLGAEGFDVENSPVSLAGRLAVQQLSARSLARRK+SLSG GGLAGWA XXXXXXXTPGNAFRL+SAGVSSRRR SGDGRVDDEDGFSTAREATNGGG+S KFFCLDRGSSWRS+AES+GSCG TAED AEKKLIAEQIEALR GDDTAAQLLPVRAA XXXXXXX RG TS SK ASFVTTL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXX E+ GE XXXXXXXX XXXXXXX G GLASDFFAEAVLEEFTVD GEGAAEA XXXXXXXXXXX LPRRKDKRRSSWEAFTFSKGVFQLASPG+ VNLG GALTG+GVPV PPPGICLVDQAKELQARRKYEVSLSEKALAKEK+RS SGEQHGRAVPEAAS
Sbjct: 447 DLTVVPSGLMRLPPPLSLEKAKELQRRSSSSALADGSSGLLGFADEGRSVNNGNNSSVVPAVESSRMPTAIDGPTAAAAMAAGWKCSGKQGAAFAVVXXXXXXXXXXXXXXXXXXX------RRPHSIDWTGAPQVVPATTALPDVDVTPLCTPLNAVRCGAGATAAEMPWPSAAATRRLPREDHRQVGRRGQVGTVVAEXXXXXXXXXXXXXSGSGEDREVSTSXXXXXAEDGRAPGEEGRDVLEAPPYSQRQQQEVGVKDAVFSAAAEVSASLSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVIIKLPDEPIAAGAAPVRLRSLQNARQPLERRPAPEQENSKKEGGSAEXXXXXXXXXXAPEEGSHDEANSRDYRRGRCFPPERG-VVVNTVTAGTERANATDGTEEKEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGVGGEELELLDAREVLGAEGFDVENSPVSLAGRLAVQQLSARSLARRKDSLSGTGGLAGWAAXXXXXXXTPGNAFRLNSAGVSSRRRISGDGRVDDEDGFSTAREATNGGGRSSKFFCLDRGSSWRSIAESVGSCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAEDGAEKKLIAEQIEALRRVGDDTAAQLLPVRAAAPSPXXXXXXXXXX--RGPTSATGSKNASFVTTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDRGSXXXXXXXXXXXDFCGSGDEEE------EDAGEDXXXXXXXXXXXXXXXXXXPSGVGLASDFFAEAVLEEFTVDDGEGAAEAXXXXXXXXXXXXXXXXXXXXXXXXLPRRKDKRRSSWEAFTFSKGVFQLASPGS------VNLGGGALTGSGVPVPPPPGICLVDQAKELQARRKYEVSLSEKALAKEKSRSDSGEQHGRAVPEAAS 1449
BLAST of mRNA_Ecto-sp13_S_contig5612.15946.1 vs. uniprot
Match: D8LJC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC8_ECTSI) HSP 1 Score: 646 bits (1667), Expect = 3.140e-202 Identity = 843/1136 (74.21%), Postives = 865/1136 (76.14%), Query Frame = 1
Query: 13 RFPGLGDRPGGGGRPGPGDPACVFLFGRRGGLGQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLTVVPSGLMRLPPPLSLEKAKELQRRSSSXXXADGSSGLLGFADEGXXXXXXXXSGVVPAVESSRMPTAIDGPTAAAAMAAGWKCSGKHGAAFAVVVAXXXXXXXXXXXXXXXXXXXXXXX--------RRPHSIDWTGAPQVVPATTALPDVDVTPLCTPLNAVRCGAGATAVEMPWPPTAAAGRLSRENHRQ---VGPSPARLERLQIARQPLERRPSPEQGDSQKEGGSAESSDXXXXXXXXPEEGSLEEADCRDYLRGGCFPPKRGG-AAVNTVAEGTERANATEGTEEEKAAAVAGVSXXXXXXXXXXXXXXQLEHAGHGQRQEWQRRPPP------VGVGGEELELLDAREVLGAEGFDVENSPVSLAGRLAVQQLSARSLARRKNSLSGPGGLAGWAXXXXXXXX-TPGNA-FRLHSAGVSSRRRGSGDGRVDDEDGFSTAREATNGGGQS-KFFCLDRGSSWRSVAESIGSCGGGGRGIAAAVVAAYDGSVADSDADSSTAGVATGGGRTQRARFYTAEDDAEKKLIAEQIEALRSGGDDTAAQLLPVRAAXXXXXXXXXXXVATAARGLTSVADSKIASFVTTLSGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGENDGEXXXXXXXXXAKAXXXXXXXXXGGGLASDFFAEAVLEEFTVDHGEGAAEAAATPATPAXXXXXXXXXXXAA-PDPLPRRKDKRRSSWEAFTFSKGVFQLASPGNAAAAGGVNLGSGALTGTGVPVXPPPGICLVDQAKELQARRKYEVSLSEKALAKEKTRSGSGEQHGRAVPEAASSSMEHKNSGQA----------REEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIARPRGTVDDPSKVTTAASPQALAPAPFAPLGKKQKA 3324
RFPG GDRP GGG PGP DPA VFLFGRRGGLGQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LTVVPSGLMRLPPPLSLEKAKELQRRSSS ADG SGLLGFADEG XXXXXXS V+PAVESS MPTAIDGPTAAAAMAAGWKCSGKHGAAFAVVVAXXXXXXXXXXXXXXXXXXXXXXX RRPHSIDWT APQVVPATTALPDVDVTPLCTPLNAVRCGAGA AVEMPWPP AA GRL RENHRQ G +P RL+RLQ RQPLERRP+PEQ DS+K XXXXXXXX EEGS E DY RGGCFPP+RGG AAV+T A+GT RANATE TEE XXXXXXXXXXXXXX VGVGGEELELLDAREVLGAEGFDVENSPVSLAGRLAVQQLSARSLARRKNSLSG G LAGWA XXXXXX TP A FRL+SAGVSSRRR SGDGRVDDEDGFSTARE TNGGG+S KFFCL+RGSSWRSVAES+GSC G XXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXX XXXXXXXXXG GLASDFFAEAVLEEFTVD GEGA XXXXXX A P+PLP RK+KRRSS EAFTFSKGVFQLASP NA+ AG VNLGSGALTGTGV V PPPGICLVDQAKELQARRKYEVSLSEKALAKEK+RSGSGEQHGR VPE +SSSME K++GQA XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIARPRGTVDDPS+ + SPQ+LAPAPFAPLGKKQKA
Sbjct: 128 RFPGFGDRPSGGGWPGPSDPAAVFLFGRRGGLGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LTVVPSGLMRLPPPLSLEKAKELQRRSSSSALADGGSGLLGFADEGGSXXXXXXSSVLPAVESSGMPTAIDGPTAAAAMAAGWKCSGKHGAAFAVVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPHSIDWTEAPQVVPATTALPDVDVTPLCTPLNAVRCGAGAAAVEMPWPPAAAVGRLPRENHRQPAAAGAAPVRLQRLQNVRQPLERRPAPEQEDSEKXXXXXXXXXXXXXXXXXXEEGSHE-----DYRRGGCFPPERGGEAAVSTGAKGTVRANATEDTEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGVGGEELELLDAREVLGAEGFDVENSPVSLAGRLAVQQLSARSLARRKNSLSGSGSLAGWASGXXXXXXXTPRKAAFRLNSAGVSSRRRVSGDGRVDDEDGFSTAREGTNGGGRSSKFFCLERGSSWRSVAESVGSCAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGLASDFFAEAVLEEFTVDDGEGAXXXXXXXXXXXXXXXXXSAKTRAVTPEPLPWRKNKRRSSLEAFTFSKGVFQLASPANASTAGSVNLGSGALTGTGVAVPPPPGICLVDQAKELQARRKYEVSLSEKALAKEKSRSGSGEQHGRVVPEVSSSSMEQKSTGQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIARPRGTVDDPSQAQSPQSPQSLAPAPFAPLGKKQKA 1254
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 3662 |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Cds size | 3660 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681463778.7005734-CDS-Ecto-sp13_S_contig5612:176..312 | 1681463778.7005734-CDS-Ecto-sp13_S_contig5612:176..312 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig5612 177..312 + |
| 1681463778.711893-CDS-Ecto-sp13_S_contig5612:763..1642 | 1681463778.711893-CDS-Ecto-sp13_S_contig5612:763..1642 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig5612 764..1642 + |
| 1681463778.7218194-CDS-Ecto-sp13_S_contig5612:2188..3825 | 1681463778.7218194-CDS-Ecto-sp13_S_contig5612:2188..3825 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig5612 2189..3825 + |
| 1681463778.7316668-CDS-Ecto-sp13_S_contig5612:4303..4473 | 1681463778.7316668-CDS-Ecto-sp13_S_contig5612:4303..4473 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig5612 4304..4473 + |
| 1681463778.7427564-CDS-Ecto-sp13_S_contig5612:5303..5573 | 1681463778.7427564-CDS-Ecto-sp13_S_contig5612:5303..5573 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig5612 5304..5573 + |
| 1681463778.7529566-CDS-Ecto-sp13_S_contig5612:6119..6294 | 1681463778.7529566-CDS-Ecto-sp13_S_contig5612:6119..6294 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig5612 6120..6294 + |
| 1681463778.7657096-CDS-Ecto-sp13_S_contig5612:6363..6756 | 1681463778.7657096-CDS-Ecto-sp13_S_contig5612:6363..6756 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig5612 6364..6756 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5612.15946.1 >prot_Ecto-sp13_S_contig5612.15946.1 ID=prot_Ecto-sp13_S_contig5612.15946.1|Name=mRNA_Ecto-sp13_S_contig5612.15946.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1220bp
RRRCRFPGLGDRPGGGGRPGPGDPACVFLFGRRGGLGQQHQQQRNHTTAA
PFVPPPPPPAAAVAAAGFSGGSTPAAAGGDGKRSPTGGGAAWIGPMLRRH
LRRGNRSGGSGGGVVVRAAAERAADAADAVVEPAAAAAAAAAAASSVEED
LTVVPSGLMRLPPPLSLEKAKELQRRSSSSASADGSSGLLGFADEGGSGN
NGNNSGVVPAVESSRMPTAIDGPTAAAAMAAGWKCSGKHGAAFAVVVAPG
EEEDEDHHQRDHRPQQQQQHHRRPHSIDWTGAPQVVPATTALPDVDVTPL
CTPLNAVRCGAGATAVEMPWPPTAAAGRLSRENHRQVGPSPARLERLQIA
RQPLERRPSPEQGDSQKEGGSAESSDSPSPPPPAPEEGSLEEADCRDYLR
GGCFPPKRGGAAVNTVAEGTERANATEGTEEEKAAAVAGVSSTLEAREEE
EEEEDQLEHAGHGQRQEWQRRPPPVGVGGEELELLDAREVLGAEGFDVEN
SPVSLAGRLAVQQLSARSLARRKNSLSGPGGLAGWAGGGGGGGGTPGNAF
RLHSAGVSSRRRGSGDGRVDDEDGFSTAREATNGGGQSKFFCLDRGSSWR
SVAESIGSCGGGGRGIAAAVVAAYDGSVADSDADSSTAGVATGGGRTQRA
RFYTAEDDAEKKLIAEQIEALRSGGDDTAAQLLPVRAAAASPSPASSSSV
ATAARGLTSVADSKIASFVTTLSGGTGAAARSSSTSAAAASSNGGDGHGR
GDARGGGVSRRRGGGGGGVGGSSGGGDDRGGGGSGDGRGGGGDDFCGSRD
EEEEDVGENDGEEEEDEEEEKAKAAPAAPSAPSGGGLASDFFAEAVLEEF
TVDHGEGAAEAAATPATPAAAGGGSAKAKAAAPDPLPRRKDKRRSSWEAF
TFSKGVFQLASPGNAAAAGGVNLGSGALTGTGVPVPPPPGICLVDQAKEL
QARRKYEVSLSEKALAKEKTRSGSGEQHGRAVPEAASSSMEHKNSGQARE
EVQEEEEEEEEEERNNAGGQEEPDSSSERSSDKISNGGVPSRAAGTTAAT
VAAALRRRRLAAAAAASSSTTIARPRGTVDDPSKVTTAASPQALAPAPFA
PLGKKQKATAASDASRTGAAVVAAGGGRGKLLRPPPVHCGGEEEGANAAS
DGRQQAGPSSSSSSSSSSSLKQQQQQQQQQVLPPRLLGPAARRRSVVSVS
PNTSSGGSEVGDDSFHSAAS back to topmRNA from alignment at Ecto-sp13_S_contig5612:177..6758+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig5612.15946.1 ID=mRNA_Ecto-sp13_S_contig5612.15946.1|Name=mRNA_Ecto-sp13_S_contig5612.15946.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6582bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5612:177..6758+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGCCGCCGCTGCCGCTTCCCAGGCCTCGGGGACCGGCCCGGCGGGGGAGG
ACGGCCCGGTCCAGGCGACCCCGCTTGTGTCTTCCTCTTCGGCAGGAGGG
GGGGGCTGGGGCAACAACATCAGCAACAACGCAACCGTGAGCAGCAGCGG
GGGAGACAGGAGGGGGCGGCGGCTTCGCAAGTGCCGGTCGCACGGCGTCA
CCGGGGCGTGCGACGTGACCGGTGGCGGGGTTTCCGTCGCGAAGGAGGAA
CAGCAGCAGCAGCAGCAGCAGCAGCACGGTGGAACGGCAACGGCCGGCAG
CTCACGCACCAGCAGCAGCAGCAGCAGCAACCGCATCAGCAACAACCGGC
GGCCGAGGAGCAGGAGCAACAGCGACAACAATGCGAAGTGGGGCGGCGGC
GGCGGCGGCGGCTTGCCGGGCGGTCTCAATGAGGCGTTCAGCTCCCGTCC
CCGCTTGGCGAAGGCCTTCCTGCCTGGAGCCGTCGGCTGGCCCGTGACGT
TCTCGCTTGGCCGCAAGGGAACGATGGCCCCTCCCCCCGACGATGCTGTC
TTAACCCCGCCGCCCCCCGGTTTGGCCTTCGCCGCAGACACCACCGCCGC
CCCGTTCGTCCCTCCGCCGCCGCCGCCTGCGGCGGCGGTGGCGGCGGCGG
GTTTCAGCGGCGGCAGCACTCCGGCAGCAGCGGGGGGCGATGGAAAGAGG
AGCCCGACTGGCGGCGGTGCAGCGTGGATCGGGCCCATGCTTCGACGCCA
CCTTAGGCGCGGGAACCGATCGGGAGGATCGGGAGGCGGCGTTGTTGTGC
GCGCGGCGGCGGAGAGGGCGGCTGATGCCGCCGATGCTGTCGTCGAACCC
GCGGCTGCGGCTGCGGCTGCGGCTGCGGCTGCCTCTAGCGTTGAGGAGGA
CCTCACAGTGGTGCCGTCGGGTCTGATGAGGCTCCCGCCCCCGCTCTCCC
TCGAGAAGGCCAAGGAGTTGCAGCGGCGTTCTTCCTCCTCCGCTTCGGCG
GATGGCAGCAGCGGGTTGCTCGGTTTCGCCGACGAGGGGGGATCTGGTAA
CAACGGCAACAACAGCGGTGTCGTCCCCGCTGTGGAATCGTCGAGGATGC
CGACGGCGATCGATGGCCCCACGGCTGCGGCGGCGATGGCAGCCGGTTGG
AAGTGCTCGGGCAAGCACGGTGCGGCCTTTGCCGTGGTCGTGGCTCCAGG
AGAAGAAGAGGACGAGGACCACCACCAGCGCGACCACCGGCCGCAGCAGC
AGCAGCAGCATCACAGACGGCCGCATTCTATCGACTGGACTGGGGCCCCG
CAGGTGGTACCCGCCACTACCGCCCTCCCGGATGTCGACGTGACCCCTTT
GTGCACGCCGCTCAACGCCGTGCGGTGCGGGGCTGGGGCGACGGCGGTGG
AGATGCCGTGGCCACCGACGGCGGCGGCCGGGAGGCTTTCACGGGAGAAT
CACCGTCAGGTGGGCCGTCGGGGGGAGGTGGGGACCGTAGTGGCCGAAGA
AGGGGAGGAGGCCGGGACCGAGGAAGAAAGCGGGAGCGGAGAGGACCGTG
AAATATCGACATCAGAGGAAGAGGAGGAGGCAGGGGACGGGCGTCCATCG
GGAGAGGAAGGGCGAGACGTGCTCGTGGCACCGCCTTGCTCGCAACGGCA
GCAACAGGAAATAGGGGAAAAGGACGCGGTGTTCTCCGGCACCGCTGAAG
TGTCGTCGTCTCTGTCTGACGACGACGACGATGATAGCGAAGGGGAAGAA
GACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTTCGCTTCTGCGAACGT
CAAACCGTCAATTGTCAGCGCTGCGGCTGCTGCCGCTGCTAGCGACGACG
CCGCTGCCACTGTCGTCGGCGATTCTACGCACCAAGTGGAAAGCCGATCA
GCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGCG
TTCTTCTTTTTCTTCCGCTGACGTCATCATTACCATCCCCGATGATCCGG
CTGCGAGGGGAGCTTCTCCGGCACGACTGGAACGACTACAGATTGCGCGG
CAGCCGCTGGAACGGCGACCGTCCCCCGAACAAGGAGACTCCCAGAAGGA
AGGGGGGTCCGCGGAATCCAGCGATTCGCCGTCGCCCCCTCCCCCTGCGC
CGGAGGAAGGCTCCCTCGAGGAGGCCGACTGCCGGGACTACCTCAGAGGA
GGTTGTTTTCCGCCGAAGAGAGGAGGAGCAGCCGTCAACACCGTGGCCGA
AGGCACCGAGCGGGCCAATGCAACCGAGGGCACGGAGGAGGAGAAGGCGG
CGGCGGTGGCGGGGGTTAGCAGCACCCTAGAGGCGCGGGAGGAGGAGGAG
GAGGAGGAGGACCAGCTGGAGCACGCCGGGCACGGGCAGCGACAAGAATG
GCAGCGACGACCGCCGCCCGTCGGGGTCGGGGGGGAGGAGCTCGAGCTCC
TGGACGCCAGGGAGGTGCTGGGCGCGGAGGGCTTCGACGTCGAGAACAGC
CCCGTCTCCCTCGCGGGGCGTCTGGCGGTCCAGCAGCTGTCGGCGAGGAG
CCTGGCACGGAGAAAGAATTCTCTCTCGGGGCCGGGAGGGCTCGCGGGAT
GGGCCGGCGGCGGCGGCGGGGGGGGGGGCACGCCGGGGAACGCGTTCCGC
TTACACTCAGCCGGAGTATCCAGTCGTCGGAGGGGTAGTGGGGACGGGAG
GGTAGACGACGAGGACGGGTTCTCGACAGCAAGGGAAGCCACTAACGGCG
GTGGGCAGAGTAAGTTTTTTTGCCTCGATCGGGGGTCTTCCTGGCGTTCG
GTCGCCGAGAGCATCGGTTCGTGTGGCGGAGGCGGTCGCGGCATCGCTGC
CGCGGTAGTCGCCGCTTACGACGGGAGCGTCGCTGATAGCGATGCGGATA
GCTCTACTGCTGGTGTTGCCACCGGAGGCGGTAGGACCCAGCGGGCGAGG
TTTTACACCGCCGAGGACGACGCGGAGAAGAAGCTCATCGCCGAACAGAT
CGAGGCCCTCCGCAGTGGTGGCGACGATACCGCGGCGCAACTGCTGCCGG
TTCGCGCCGCCGCCGCCTCCCCATCGCCTGCCTCCTCCTCTTCCGTAGCA
ACAGCCGCAAGAGGACTCACTTCGGTGGCCGATTCCAAAATCGCCTCCTT
TGTGACGACCCTGTCGGGCGGAACGGGAGCGGCGGCGAGATCGTCGTCGA
CGTCTGCTGCTGCTGCTTCTAGCAACGGTGGTGACGGGCATGGCCGTGGT
GACGCTCGCGGTGGCGGTGTGAGCCGCCGAAGGGGCGGCGGTGGCGGCGG
CGTCGGCGGCAGCAGTGGCGGGGGTGATGATCGGGGGGGCGGGGGCAGTG
GCGACGGTCGTGGTGGTGGAGGGGATGATTTTTGCGGATCAAGGGATGAG
GAAGAAGAGGACGTCGGTGAAAACGATGGCGAGGAGGAGGAGGACGAGGA
GGAAGAGAAAGCGAAGGCGGCGCCTGCGGCGCCTTCGGCGCCGTCGGGGG
GAGGGCTTGCGTCGGACTTCTTTGCTGAGGCGGTGCTGGAAGAGTTCACG
GTTGATCATGGGGAGGGCGCGGCTGAGGCAGCGGCGACGCCGGCGACACC
GGCGGCTGCTGGGGGTGGTTCTGCCAAGGCAAAAGCCGCAGCTCCTGATG
TGAGCAACGAGCGCCTCAATATTTGGTAGTTCCTGCATGGATTGTGGAAC
CTCTTGAATAGCTGTGGTCCGTCCAATAGTGGTGGACCCTCTGTATATAG
TCTTTGTGCTGGCGGTCCGTCTTTGGTTGTAGCCTTCTGTACTGATGGTG
CGGCCGGCGGCTTGTTAGTCTGACTGAAGAGCTGTCCAGTCTTTTTTCTC
ATTCTGTTTGACCCCGGCTTGTGCAACAATAAAAACTGCGTTGCCCCTAA
TGCCCCGCTCTCACAGCCCCCCCCCCCCCCCTGGTCTCGCATGACACAAC
GATGCCCCCCTCAACCGACCTCACCCGCCCCGCTCTTACAGCATTCCCCC
CGTTTTCACACGATACCGAGGTGGCTTGCAAACCCCACCCCACCTCACTC
ACCTCGCCCTTACAACCCCCCCCCTCCCCCCTCCCGTTTTGGCACGATAC
TACGCCCCCCTCCCCCCACTCCCACAGCCCCTCCCGAGAAGGAAAGACAA
GAGGAGGTCCTCCTGGGAAGCCTTCACTTTCTCCAAGGGCGTCTTCCAGC
TGGCTAGCCCCGGCAACGCCGCCGCCGCCGGCGGCGTCAACCTCGGTAGT
GGCGCTTTGACAGGAACTGGCGTGCCCGTCCCGCCTCCTCCCGGAATGTG
AGAGGAGAGGTCGAGAATGGTTGTGTGGTGTGTGGGGAGAGTGAGAGGTT
GAGGAGGTGACAGTGGTCGTGGTGGGGTCGTTGGGGTGTGGGTAACGGGA
GAGGGGGCTCGAGAAGGTTGTGTTGGTGTGTTACTCATTGTAGTGTGGAG
AATGGGGGATGTTGAGCAAGCAAGAGCGGTTGAAGTCGGGTTAGTGGGGT
GTGGTGAAATGGGAGAGACGAAGGAAGTAAAAGCGGTAGTAGGGGGGTTG
TTGGGGTGTGGTGAGGACGCAACAGGGGTTGACGTCGGGTTAGTGGGGTA
ACTCAAGAAGCACAAGCATCACCGTAGGTGACGTAAGATAGCACACCCCG
GTCGGACTCATTTCCAAAGCGCGAACAGAAACGAGTGGCGGTGCCGAAAG
TTCAAGGCGTCGTGGGTTTTTAGGGGTGTGGGGAACCGGAGAGGTTGAGG
CAGCAGTCGGGTTGTGTGGTGTGGGGAATGGGAGAGATCGAGAAGAAAGT
AGTGGTCGTCTATGGGGTGGCGTGTTGTTGATGTGGGGTGCGAAGCTGAC
TGTAACGACACATCGCGTGTACAGTACTGTAGCCGTGTAAAGGTATATAG
ATGCATTCCGAAGGGCTGTTTCCCATCCATACGGATGATGGCGGAAGTGG
GAACAAGGCGCAGAAGTAGACCGACATGTTTGGGTCCACTGCGTCTTCTT
GTTGGCCAGTTCTATTTCTTTTCTTGCTAACCACTTCACAAGCCTCGAGT
CGCTGATCTTTGGAAGTCTGACGCTGCTGCTGATGCTGCTGCTCAATCGT
GAAACCACGTTCGCCGTCAACAAACAGTTGTTTGGTCGACCAGGCTAAGG
AGCTGCAGGCCAGGAGGAAGTACGAGGTCAGCCTTAGCGAGAAGGCGCTC
GCGAAGGAGAAGACCCGGAGCGGCAGCGGGGAGCAGCACGGCCGAGCAGT
TCCCGAGGCAGCATCGTCAAGCATGGAGCACAAGAACAGCGGTCAGGCGA
GAGAAGAGGTCCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCGTAAC
AACGCCGGGGGGCAGGAAGAGCCGGACAGTTCTTCGGAACGGTCTTCGTT
AGGTGCCGGTCCGGGACAAGAAGAAGGACGACCTTCTTCTTCGCCTTCTG
CTGCCGCTGCTGCTGCTTCTGCTGATGTGCAGACCTCTCTTGCACAGCAG
CAGGAGCAGTTGCACCAGCAACAGCGTCAGGAACAGCAACAAAAGACGGC
TGTGCAGACCTCTCTTCGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAAGCGGCGGAGGCGGCAACCTCGCCGCCGATGCTGACGTTCTTGGGC
CCGGACTTTTCGTCGGCATCGGCTGCAGCAGCTGCCGCGGCCACCACCAA
CCCGGCGTCGTTCTCCTTCTCCGCCACGTCCTCGGCTTCCTCCGGCTCCC
GTTCTTCCGTCGGTAGCGGCGGCGGGGGCTCCGCGTTTGCGGTTACTGCC
GCGACCCCCCCCGCGCTCGTCGCGCCTCGGCATGGGTCCGGGTATGCCGT
CCCCGTGAAAAACGCTTGTCCTTCGCATGCGGCGGCGGCGGCGGCGGCGG
CGGCGGCCTCTTCTTCGACGGTTGCCCTCGACGGCGGCAAGAGCGATAAG
ATCAGCAACGGCGGCGTCCCGTCCAGAGCAGCAGGGACGACGGCGGCGAC
CGTAGCGGCGGCGCTGCGGCGACGGCGGCTGGCCGCGGCCGCGGCGGCCT
CCTCGTCGACTACGATCGCCAGGCCAAGGGGCACGGTAGACGATCCCTCG
AAGGTGACCACCGCCGCGGTGATGACGAGCGAGGCTCCATCCCGTCCGCG
TGCCCCCCCGTCGCCGCCGCCGCCGCCGCAGGCGCAGTCGCCGCAGGCGC
TGGCCCCGGCGCCGTTCGCCCCGCTCGGCAAGAAGCAGAAGGCGACGGCC
GCCTCCGACGCGTCGAGGACGGGTGCTGCTGTCGTGGCGGCAGGGGGAGG
AAGAGGGAAGCTGCTGCGGCCGCCGCCGGTTCATTGTGGCGGCGAAGAGG
AAGGAGCGAATGCTGCTTCGGACGGGAGGCAGCAGGCCGGTCCGTCGTCG
TCTTCTTCTTCTTCTTCTTCTTCTTCCCTCAAGCAGCAGCAGCAGCAGCA
GCAGCAGCAAGTTCTTCCCCCGCGGCTGCTAGGGCCGGCGGCACGGCGGC
GAAGCGTCGTCTCCGTTAGCCCGAACACGAGCAGCGGCGGAAGCGAGGTC
GGGGACGACTCCTTCCACAGCGCGGCGAGCAA back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig5612:177..6758+ >mRNA_Ecto-sp13_S_contig5612.15946.1 ID=mRNA_Ecto-sp13_S_contig5612.15946.1|Name=mRNA_Ecto-sp13_S_contig5612.15946.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3660bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5612:177..6758+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGCCGCCGCTGCCGCTTCCCAGGCCTCGGGGACCGGCCCGGCGGGGGAGG
ACGGCCCGGTCCAGGCGACCCCGCTTGTGTCTTCCTCTTCGGCAGGAGGG
GGGGGCTGGGGCAACAACATCAGCAACAACGCAACCACACCACCGCCGCC
CCGTTCGTCCCTCCGCCGCCGCCGCCTGCGGCGGCGGTGGCGGCGGCGGG
TTTCAGCGGCGGCAGCACTCCGGCAGCAGCGGGGGGCGATGGAAAGAGGA
GCCCGACTGGCGGCGGTGCAGCGTGGATCGGGCCCATGCTTCGACGCCAC
CTTAGGCGCGGGAACCGATCGGGAGGATCGGGAGGCGGCGTTGTTGTGCG
CGCGGCGGCGGAGAGGGCGGCTGATGCCGCCGATGCTGTCGTCGAACCCG
CGGCTGCGGCTGCGGCTGCGGCTGCGGCTGCCTCTAGCGTTGAGGAGGAC
CTCACAGTGGTGCCGTCGGGTCTGATGAGGCTCCCGCCCCCGCTCTCCCT
CGAGAAGGCCAAGGAGTTGCAGCGGCGTTCTTCCTCCTCCGCTTCGGCGG
ATGGCAGCAGCGGGTTGCTCGGTTTCGCCGACGAGGGGGGATCTGGTAAC
AACGGCAACAACAGCGGTGTCGTCCCCGCTGTGGAATCGTCGAGGATGCC
GACGGCGATCGATGGCCCCACGGCTGCGGCGGCGATGGCAGCCGGTTGGA
AGTGCTCGGGCAAGCACGGTGCGGCCTTTGCCGTGGTCGTGGCTCCAGGA
GAAGAAGAGGACGAGGACCACCACCAGCGCGACCACCGGCCGCAGCAGCA
GCAGCAGCATCACAGACGGCCGCATTCTATCGACTGGACTGGGGCCCCGC
AGGTGGTACCCGCCACTACCGCCCTCCCGGATGTCGACGTGACCCCTTTG
TGCACGCCGCTCAACGCCGTGCGGTGCGGGGCTGGGGCGACGGCGGTGGA
GATGCCGTGGCCACCGACGGCGGCGGCCGGGAGGCTTTCACGGGAGAATC
ACCGTCAGGTGGGCCCTTCTCCGGCACGACTGGAACGACTACAGATTGCG
CGGCAGCCGCTGGAACGGCGACCGTCCCCCGAACAAGGAGACTCCCAGAA
GGAAGGGGGGTCCGCGGAATCCAGCGATTCGCCGTCGCCCCCTCCCCCTG
CGCCGGAGGAAGGCTCCCTCGAGGAGGCCGACTGCCGGGACTACCTCAGA
GGAGGTTGTTTTCCGCCGAAGAGAGGAGGAGCAGCCGTCAACACCGTGGC
CGAAGGCACCGAGCGGGCCAATGCAACCGAGGGCACGGAGGAGGAGAAGG
CGGCGGCGGTGGCGGGGGTTAGCAGCACCCTAGAGGCGCGGGAGGAGGAG
GAGGAGGAGGAGGACCAGCTGGAGCACGCCGGGCACGGGCAGCGACAAGA
ATGGCAGCGACGACCGCCGCCCGTCGGGGTCGGGGGGGAGGAGCTCGAGC
TCCTGGACGCCAGGGAGGTGCTGGGCGCGGAGGGCTTCGACGTCGAGAAC
AGCCCCGTCTCCCTCGCGGGGCGTCTGGCGGTCCAGCAGCTGTCGGCGAG
GAGCCTGGCACGGAGAAAGAATTCTCTCTCGGGGCCGGGAGGGCTCGCGG
GATGGGCCGGCGGCGGCGGCGGGGGGGGGGGCACGCCGGGGAACGCGTTC
CGCTTACACTCAGCCGGAGTATCCAGTCGTCGGAGGGGTAGTGGGGACGG
GAGGGTAGACGACGAGGACGGGTTCTCGACAGCAAGGGAAGCCACTAACG
GCGGTGGGCAGAGTAAGTTTTTTTGCCTCGATCGGGGGTCTTCCTGGCGT
TCGGTCGCCGAGAGCATCGGTTCGTGTGGCGGAGGCGGTCGCGGCATCGC
TGCCGCGGTAGTCGCCGCTTACGACGGGAGCGTCGCTGATAGCGATGCGG
ATAGCTCTACTGCTGGTGTTGCCACCGGAGGCGGTAGGACCCAGCGGGCG
AGGTTTTACACCGCCGAGGACGACGCGGAGAAGAAGCTCATCGCCGAACA
GATCGAGGCCCTCCGCAGTGGTGGCGACGATACCGCGGCGCAACTGCTGC
CGGTTCGCGCCGCCGCCGCCTCCCCATCGCCTGCCTCCTCCTCTTCCGTA
GCAACAGCCGCAAGAGGACTCACTTCGGTGGCCGATTCCAAAATCGCCTC
CTTTGTGACGACCCTGTCGGGCGGAACGGGAGCGGCGGCGAGATCGTCGT
CGACGTCTGCTGCTGCTGCTTCTAGCAACGGTGGTGACGGGCATGGCCGT
GGTGACGCTCGCGGTGGCGGTGTGAGCCGCCGAAGGGGCGGCGGTGGCGG
CGGCGTCGGCGGCAGCAGTGGCGGGGGTGATGATCGGGGGGGCGGGGGCA
GTGGCGACGGTCGTGGTGGTGGAGGGGATGATTTTTGCGGATCAAGGGAT
GAGGAAGAAGAGGACGTCGGTGAAAACGATGGCGAGGAGGAGGAGGACGA
GGAGGAAGAGAAAGCGAAGGCGGCGCCTGCGGCGCCTTCGGCGCCGTCGG
GGGGAGGGCTTGCGTCGGACTTCTTTGCTGAGGCGGTGCTGGAAGAGTTC
ACGGTTGATCATGGGGAGGGCGCGGCTGAGGCAGCGGCGACGCCGGCGAC
ACCGGCGGCTGCTGGGGGTGGTTCTGCCAAGGCAAAAGCCGCAGCTCCTG
ATCCCCTCCCGAGAAGGAAAGACAAGAGGAGGTCCTCCTGGGAAGCCTTC
ACTTTCTCCAAGGGCGTCTTCCAGCTGGCTAGCCCCGGCAACGCCGCCGC
CGCCGGCGGCGTCAACCTCGGTAGTGGCGCTTTGACAGGAACTGGCGTGC
CCGTCCCGCCTCCTCCCGGAATTTGTTTGGTCGACCAGGCTAAGGAGCTG
CAGGCCAGGAGGAAGTACGAGGTCAGCCTTAGCGAGAAGGCGCTCGCGAA
GGAGAAGACCCGGAGCGGCAGCGGGGAGCAGCACGGCCGAGCAGTTCCCG
AGGCAGCATCGTCAAGCATGGAGCACAAGAACAGCGGTCAGGCGAGAGAA
GAGGTCCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCGTAACAACGC
CGGGGGGCAGGAAGAGCCGGACAGTTCTTCGGAACGGTCTTCCGATAAGA
TCAGCAACGGCGGCGTCCCGTCCAGAGCAGCAGGGACGACGGCGGCGACC
GTAGCGGCGGCGCTGCGGCGACGGCGGCTGGCCGCGGCCGCGGCGGCCTC
CTCGTCGACTACGATCGCCAGGCCAAGGGGCACGGTAGACGATCCCTCGA
AGGTGACCACCGCCGCGTCGCCGCAGGCGCTGGCCCCGGCGCCGTTCGCC
CCGCTCGGCAAGAAGCAGAAGGCGACGGCCGCCTCCGACGCGTCGAGGAC
GGGTGCTGCTGTCGTGGCGGCAGGGGGAGGAAGAGGGAAGCTGCTGCGGC
CGCCGCCGGTTCATTGTGGCGGCGAAGAGGAAGGAGCGAATGCTGCTTCG
GACGGGAGGCAGCAGGCCGGTCCGTCGTCGTCTTCTTCTTCTTCTTCTTC
TTCTTCCCTCAAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGTTCTTCCCC
CGCGGCTGCTAGGGCCGGCGGCACGGCGGCGAAGCGTCGTCTCCGTTAGC
CCGAACACGAGCAGCGGCGGAAGCGAGGTCGGGGACGACTCCTTCCACAG
CGCGGCGAGC back to top
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