prot_Ecto-sp13_S_contig5605.15937.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5605.15937.1
Unique Nameprot_Ecto-sp13_S_contig5605.15937.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length163
Homology
BLAST of mRNA_Ecto-sp13_S_contig5605.15937.1 vs. uniprot
Match: D8LQK6_ECTSI (Transcriptional regulator, AraC family with Parallel beta-helix repeat n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQK6_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 8.520e-29
Identity = 73/154 (47.40%), Postives = 89/154 (57.79%), Query Frame = 0
Query:   10 PGEGVEYVIFVQNTGTITMSGLQVSDGLLGESLDCDESPAGGYLAPKSSITCTGTYQINQGDIDLGHVSNTAIVNAVEPDGTAVEEPGGSLLSLPRRPEISLAVETCTFTGSDANRAEVGQGVAYTFTMKNTGSTTLIGLDVNSGFLDQALVGV 163
            PG+ V Y I + N G++T+  +   D     +  C E   G  L P     C G   + Q ++D   V  T  + A +     VE+   S + LP    + L VETC+FTGSDANRAEVGQGVAYTFTMKNTGSTTL GLDVNS FLDQAL  V
Sbjct:   16 PGDAVVYTITITNDGSLTLHDV-TPDSPQALAWAC-ELAEGAALVPGVETKCVGRLVLTQNNLDEAQVVTTVTITATDSANELVEDDLSSTVELPTSSSL-LVVETCSFTGSDANRAEVGQGVAYTFTMKNTGSTTLTGLDVNSVFLDQALDNV 166          
BLAST of mRNA_Ecto-sp13_S_contig5605.15937.1 vs. uniprot
Match: UPI001CC142F1 (DUF11 domain-containing protein n=1 Tax=Nocardioides rotundus TaxID=1774216 RepID=UPI001CC142F1)

HSP 1 Score: 100 bits (250), Expect = 1.140e-21
Identity = 59/153 (38.56%), Postives = 83/153 (54.25%), Query Frame = 0
Query:    1 DNDGDGDCDPGEGVEYVIFVQNTGTITMSGLQVSDGLLGESLDCDESPAGGYLAPKSSITCTGTYQINQGDIDLGHVSNTAIVNAVEPDGTAVEEPGG-SLLSLPRRPEISLAVETCTFTGSDANRAEVGQGVAYTFTMKNTGSTTLIGLDVN 152
            D DGD   D GE ++Y   V NTG +T++G+ V D  +G ++ C   P    + P +S+ CT TY + Q DID G V+N A      P G  V  PG  S L +  R  + LA +         N A+VG+ V YTFT+ NTG+TTL G+ ++
Sbjct: 1339 DQDGDDLADVGETIDYTFTVTNTGNVTLTGIAVDDPKVG-AVTCPTGP----VTPGASVECTATYTVTQDDIDAGSVTNVATATGTTPGGGDVTSPGDDSTLPVDDRGALRLAKDAVLADEDSDNLADVGETVNYTFTVTNTGATTLTGVSID 1486          
BLAST of mRNA_Ecto-sp13_S_contig5605.15937.1 vs. uniprot
Match: UPI0018DDCFEE (DUF11 domain-containing protein n=1 Tax=Chelativorans sp. J32 TaxID=935840 RepID=UPI0018DDCFEE)

HSP 1 Score: 100 bits (250), Expect = 1.140e-21
Identity = 62/164 (37.80%), Postives = 90/164 (54.88%), Query Frame = 0
Query:    1 DNDGDGDCDPGEGVEYVIFVQNTGTITMSGLQVSDGLLGESLDCDESPAGGYLAPKSSITCTGTYQINQGDIDLGHVSNTAIVNAVEPDGTAVEEPGGSLLSLPRRPEISLAVETCTFTGSDANRA-EVGQGVAYTFTMKNTGSTTLIGLDVNSGFLDQALVGV 163
            DNDGDG  D GE + Y   V+NTGT+TM+G+ V+D LL  + +   +P    LAP    T T TY   Q DID G V NTA      PDG  +E P  +++  P +      V+T T    D +   ++G+ ++Y+F ++NTG+ T+ G+ VN   L  A + V
Sbjct: 1761 DNDGDGLLDLGETITYSFRVENTGTVTMTGVTVNDPLLANA-NISVTPGPQTLAPGGVATFTATYTPTQADIDAGRVENTATGVGTPPDGPPIESPPDTVVVPPDQTPGLTIVKTGTLNDLDGDGLLDLGETISYSFRVENTGTVTMTGVTVNDPLLANANIAV 1923          
BLAST of mRNA_Ecto-sp13_S_contig5605.15937.1 vs. uniprot
Match: UPI001295408B (choice-of-anchor D domain-containing protein n=1 Tax=Rhizobium meliloti TaxID=382 RepID=UPI001295408B)

HSP 1 Score: 99.4 bits (246), Expect = 3.560e-21
Identity = 61/165 (36.97%), Postives = 92/165 (55.76%), Query Frame = 0
Query:    1 DNDGDGDCDPGEGVEYVIFVQNTGTITMSGLQVSDGLLGESLDCDESPAGGYLAPKSSITCTGTYQINQGDIDLGHVSNTAIVNAVEPDGTAVEEPGGSLLSLP-RRPEISLAVETCTFTGSDANRA-EVGQGVAYTFTMKNTGSTTLIGLDVNSGFLDQALVGV 163
            D+DGDG  DPGE + +   VQNTGT+TM+G+ V+D +L  +     +P    LAP  + T T TY   Q +ID G V NTA      P G   E P  +++  P + P +S+ V+T T   SD +   ++G+ ++Y+F ++NTG  T+  + VN   L  A + V
Sbjct:  548 DSDGDGLLDPGETINFSFRVQNTGTLTMTGVTVNDPML-TNAGISVTPGPQTLAPGGTATFTATYAPTQAEIDAGEVENTATATGTPPSGPPTESPPDTVIVPPDQAPRLSI-VKTGTLNDSDGDGLIDLGETISYSFRVQNTGPVTMTNVTVNDPLLTNAGISV 710          
BLAST of mRNA_Ecto-sp13_S_contig5605.15937.1 vs. uniprot
Match: UPI00041C684E (DUF11 domain-containing protein n=6 Tax=Rhizobium meliloti TaxID=382 RepID=UPI00041C684E)

HSP 1 Score: 99.4 bits (246), Expect = 3.980e-21
Identity = 61/165 (36.97%), Postives = 92/165 (55.76%), Query Frame = 0
Query:    1 DNDGDGDCDPGEGVEYVIFVQNTGTITMSGLQVSDGLLGESLDCDESPAGGYLAPKSSITCTGTYQINQGDIDLGHVSNTAIVNAVEPDGTAVEEPGGSLLSLP-RRPEISLAVETCTFTGSDANRA-EVGQGVAYTFTMKNTGSTTLIGLDVNSGFLDQALVGV 163
            D+DGDG  DPGE + +   VQNTGT+TM+G+ V+D +L  +     +P    LAP  + T T TY   Q +ID G V NTA      P G   E P  +++  P + P +S+ V+T T   SD +   ++G+ ++Y+F ++NTG  T+  + VN   L  A + V
Sbjct: 1507 DSDGDGLLDPGETINFSFRVQNTGTLTMTGVTVNDPML-TNAGISVTPGPQTLAPGGTATFTATYAPTQAEIDAGEVENTATATGTPPSGPPTESPPDTVIVPPDQAPRLSI-VKTGTLNDSDGDGLIDLGETISYSFRVQNTGPVTMTNVTVNDPLLTNAGISV 1669          
BLAST of mRNA_Ecto-sp13_S_contig5605.15937.1 vs. uniprot
Match: A0A849HKK8_9MICO (DUF11 domain-containing protein n=2 Tax=Knoellia sp. DB2414S TaxID=2730921 RepID=A0A849HKK8_9MICO)

HSP 1 Score: 98.6 bits (244), Expect = 7.480e-21
Identity = 56/149 (37.58%), Postives = 82/149 (55.03%), Query Frame = 0
Query:    9 DPGEGVEYVIFVQNTGTITMSGLQVSDGLLGES-LDCDESPAGGYLAPKSSITCTGTYQINQGDIDLGHVSNTAIVNAVEPDGTAVEEPGGSLLSLPRRPEISLAVETCTFTGSDANRAEVGQGVAYTFTMKNTGSTTLIGLDVNSGFL 156
            D G+ V Y I V+NTGT+T+  + ++D  LG + + CD       LAP +S TC+  Y + QGDID G V NTA V    PDGT V+    + + LP    ++L+        +D N  + G  + YTFT+ NTG+TTL  + ++   L
Sbjct: 3820 DAGDTVTYTITVENTGTVTLDPVLITDAKLGVADVACDGQSR---LAPGASATCSFRYVLTQGDIDAGGVDNTASVEGAGPDGTVVDYEDVARVDLPATNAVTLSKSASAVVDNDGNGPDAGDTITYTFTVTNTGATTLAPVTISDSRL 3965          
BLAST of mRNA_Ecto-sp13_S_contig5605.15937.1 vs. uniprot
Match: UPI001AECB244 (DUF642 domain-containing protein n=7 Tax=Rhizobium meliloti TaxID=382 RepID=UPI001AECB244)

HSP 1 Score: 97.1 bits (240), Expect = 2.550e-20
Identity = 60/165 (36.36%), Postives = 91/165 (55.15%), Query Frame = 0
Query:    1 DNDGDGDCDPGEGVEYVIFVQNTGTITMSGLQVSDGLLGESLDCDESPAGGYLAPKSSITCTGTYQINQGDIDLGHVSNTAIVNAVEPDGTAVEEPGGSLLSLP-RRPEISLAVETCTFTGSDANRA-EVGQGVAYTFTMKNTGSTTLIGLDVNSGFLDQALVGV 163
            D+DGDG  DPGE + +   VQNTGT+TM+G+ V+D +L  +     +P    LAP  + T T TY   Q +ID G V NTA      P G   E P  +++  P + P +S+ V+  T   SD +   ++G+ ++Y+F ++NTG  T+  + VN   L  A + V
Sbjct: 1578 DSDGDGLLDPGETINFSFRVQNTGTLTMTGVTVNDPML-TNAGISVTPGPQTLAPGGTATFTATYAPTQAEIDAGEVENTATATGTPPSGPPTESPPDTVIVPPDQAPRLSI-VKIGTLNDSDGDGLIDLGETISYSFRVQNTGPVTMTNVTVNDPLLTNAGISV 1740          
BLAST of mRNA_Ecto-sp13_S_contig5605.15937.1 vs. uniprot
Match: UPI000FD72903 (choice-of-anchor D domain-containing protein n=1 Tax=Rhizobium meliloti TaxID=382 RepID=UPI000FD72903)

HSP 1 Score: 95.5 bits (236), Expect = 7.780e-20
Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 0
Query:    1 DNDGDGDCDPGEGVEYVIFVQNTGTITMSGLQVSDGLLGESLDCDESPAGGYLAPKSSITCTGTYQINQGDIDLGHVSNTAIVNAVEPDGTAVEEPGGSLLSLPRRPEISLAVETCTFTGSDANRA-EVGQGVAYTFTMKNTGSTTLIGLDVNSGFLDQALVGV 163
            D+DGDG  D GE + Y   VQNTGT++M+G+ V+D LL  +     +P    LAP  + T T TY   QGDID G V NTA      P G  +E P  +++  P +       +T T   SD +   + G+ V+Y+F ++NTG+ T+  + V+   L  A + V
Sbjct:  398 DSDGDGLIDLGETISYSFRVQNTGTVSMTGVTVNDPLL-TNAGISVTPGPQTLAPGGTATFTATYTPTQGDIDAGRVENTATGTGTPPSGPPIESPPDTVVVPPDQTPALTIEKTGTLNDSDGDGLLDPGETVSYSFLVRNTGTVTMTNVTVDDPLLANAGLSV 560          
BLAST of mRNA_Ecto-sp13_S_contig5605.15937.1 vs. uniprot
Match: A0A7X0GFS0_9MICC (Putative repeat protein (TIGR01451 family) n=2 Tax=Arthrobacter sp. AZCC_0090 TaxID=2735881 RepID=A0A7X0GFS0_9MICC)

HSP 1 Score: 94.4 bits (233), Expect = 2.050e-19
Identity = 58/154 (37.66%), Postives = 88/154 (57.14%), Query Frame = 0
Query:    1 DNDGDGDCDPGEGVEYVIFVQNTGTITMSGLQVSDGLLGESLDCDESPAGGYLAPKSSITCTGTYQINQGDIDLGHVSNTAIVNAVEPDGT-AVEEPGGSLLSLPRRPEISLAVETCTFTGSDANR-AEVGQGVAYTFTMKNTGSTTLIGLDVN 152
            D++G+G  D GE + Y I   NTG++T+S +QVSD  +  +L+C   P+G  LAP +++TCTG+Y + Q DID G V NTA      PDG+ A   PG + +       +S   +T     ++ N  A+ G+ +AYT   KN GS T+  + V+
Sbjct:  669 DSNGNGLADAGETINYTITTTNTGSVTVSNVQVSDPKI-PTLNCTP-PSGSTLAPGAAMTCTGSYVVTQADIDSGSVKNTATATGTLPDGSPAPSTPGSATVPANTSGHLSTT-KTAVLNDTNGNGLADAGESIAYTTVTKNDGSATINNVTVS 819          
BLAST of mRNA_Ecto-sp13_S_contig5605.15937.1 vs. uniprot
Match: A0A7Z0D8G2_9ACTN (Putative repeat protein (TIGR01451 family) n=1 Tax=Naumannella cuiyingiana TaxID=1347891 RepID=A0A7Z0D8G2_9ACTN)

HSP 1 Score: 94.4 bits (233), Expect = 2.250e-19
Identity = 54/157 (34.39%), Postives = 88/157 (56.05%), Query Frame = 0
Query:    1 DNDGDGDCDPGEGVEYVIFVQNTGTITMSGLQVSDGLLGESLDCDESPAGGYLAPKSSITCTGTYQINQGDIDLGHVSNTAIVNAVEPDGTAVEEPGGSLLSLPRRPEISLAVETCT-FTGSDANRAEVGQGVAYTFTMKNTGSTTLIGLDVNSGFL 156
            D DGDG  + GE ++Y   V+NTG++T++ + V+D  +G ++ C  +     L P   +TCT +Y ++Q D+D G V NTA  +   P G AV+       ++PR   I L  +  T    +++NR + G  + YTFT+ NTG+T++  L V+   L
Sbjct: 3058 DVDGDGRIESGERIDYTFVVRNTGSVTLTEVGVNDPKVG-AVTCPNTT----LDPGQEVTCTASYMLSQADVDSGEVENTATASGTPPLGVAVKATDTETTTVPREATIVLDKQAGTPVDANNSNRLDAGDKIDYTFTITNTGTTSVTDLAVDDSLL 3209          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5605.15937.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQK6_ECTSI8.520e-2947.40Transcriptional regulator, AraC family with Parall... [more]
UPI001CC142F11.140e-2138.56DUF11 domain-containing protein n=1 Tax=Nocardioid... [more]
UPI0018DDCFEE1.140e-2137.80DUF11 domain-containing protein n=1 Tax=Chelativor... [more]
UPI001295408B3.560e-2136.97choice-of-anchor D domain-containing protein n=1 T... [more]
UPI00041C684E3.980e-2136.97DUF11 domain-containing protein n=6 Tax=Rhizobium ... [more]
A0A849HKK8_9MICO7.480e-2137.58DUF11 domain-containing protein n=2 Tax=Knoellia s... [more]
UPI001AECB2442.550e-2036.36DUF642 domain-containing protein n=7 Tax=Rhizobium... [more]
UPI000FD729037.780e-2036.59choice-of-anchor D domain-containing protein n=1 T... [more]
A0A7X0GFS0_9MICC2.050e-1937.66Putative repeat protein (TIGR01451 family) n=2 Tax... [more]
A0A7Z0D8G2_9ACTN2.250e-1934.39Putative repeat protein (TIGR01451 family) n=1 Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001434Domain of unknown function DUF11TIGRFAMTIGR01451TIGR01451coord: 122..147
e-value: 0.0012
score: 16.6
coord: 9..36
e-value: 3.3E-5
score: 21.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5605contigEcto-sp13_S_contig5605:4913..5973 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5605.15937.1mRNA_Ecto-sp13_S_contig5605.15937.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5605 4913..5973 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5605.15937.1 ID=prot_Ecto-sp13_S_contig5605.15937.1|Name=mRNA_Ecto-sp13_S_contig5605.15937.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=163bp
DNDGDGDCDPGEGVEYVIFVQNTGTITMSGLQVSDGLLGESLDCDESPAG
GYLAPKSSITCTGTYQINQGDIDLGHVSNTAIVNAVEPDGTAVEEPGGSL
LSLPRRPEISLAVETCTFTGSDANRAEVGQGVAYTFTMKNTGSTTLIGLD
VNSGFLDQALVGV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001434DUF11