prot_Ecto-sp13_S_contig5605.15936.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5605.15936.1
Unique Nameprot_Ecto-sp13_S_contig5605.15936.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length230
Homology
BLAST of mRNA_Ecto-sp13_S_contig5605.15936.1 vs. uniprot
Match: D8LQK5_ECTSI (Transcriptional regulator, AraC family with Parallel beta-helix repeat n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQK5_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 2.770e-88
Identity = 158/178 (88.76%), Postives = 166/178 (93.26%), Query Frame = 0
Query:    1 GDSFSCSPRVTILQSNVDAGSMGSTARATALTTLSTPVHGSANTTVTFNREASLSCQANCTYVDSDDTNGPSAGDTISYVFDIENNGTTTVWSMVIDSGFVGPVVCSPPLESLELAPGGKTECTSTYQAN--DLDAGVVTSSVVVSAISPIGDKTARIEEAVEIERESSLAVGKYLSC 176
            GDSFSCSP+V ILQSNVDAGSMGSTARATALTTLSTPV GSANTTVTF REASLSCQAN TYVDSDDTNGPS+GD ISYVFDIENNGTTTVWS+VIDSGFVGPVVCSPPLESLEL PGGKTECTSTYQ +  +LDAGVVT+SVVVSA SP+GD TARIEE VEIERESSLAVGK+LSC
Sbjct: 1339 GDSFSCSPQVIILQSNVDAGSMGSTARATALTTLSTPVQGSANTTVTFIREASLSCQANGTYVDSDDTNGPSSGDMISYVFDIENNGTTTVWSIVIDSGFVGPVVCSPPLESLELGPGGKTECTSTYQMDQDNLDAGVVTNSVVVSATSPVGDTTARIEEDVEIERESSLAVGKHLSC 1516          
BLAST of mRNA_Ecto-sp13_S_contig5605.15936.1 vs. uniprot
Match: A0A427SX95_9PSEU (DUF11 domain-containing protein n=3 Tax=Amycolatopsis TaxID=1813 RepID=A0A427SX95_9PSEU)

HSP 1 Score: 105 bits (261), Expect = 3.150e-22
Identity = 86/240 (35.83%), Postives = 124/240 (51.67%), Query Frame = 0
Query:    1 GDSFSCSPRVTILQSNVDAGSMGSTARATALTT--LSTPVHGSANTTVTFNREASLSCQANCTYVDSDDTNGPSAGDTISYVFDIENNGTTTVWSMVIDSGFVGPVVCSPPLESLELAPGGKTECTSTYQA---NDLDAGVVTSSVVVSAISPIGDK-TARIEEAVEIERESSLAVGKYLS-CTD----GVVNAGDILLYSFTVTNTGQTCLAVLSVLDDNAGDVNCAFVANMAGEDMLC 229
            G S +C+    + Q++VD+GS+ +TARAT   T         S  T V   R  +L  QA    V   D NG  AGDTI+Y F + N G  T+  + +D    GPV C  P+ S  LAPG  T C++   A   +D+DAG V ++   +  SP G   T     +  +   +S+++ K +S  TD    GVV+AGD + Y+FTVTNTG   L+ +SV D   G V+C   +   G+ + C
Sbjct:  479 GASATCTATYRLTQADVDSGSVPNTARATGTATDLPDATDDDSVTTPVPVVRALALDKQAGP--VTDVDGNGQDAGDTIAYTFTVTNTGNVTLNPVSVDDPKAGPVSC--PVSS--LAPGESTRCSARPYALTQSDVDAGKVDNTATATGRSPDGGTATGTDSTSTPVTGAASISLTKAVSGVTDVNGNGVVDAGDTVAYTFTVTNTGNVTLSAVSVADPKVGPVSCPVSSLAPGKSVQC 712          
BLAST of mRNA_Ecto-sp13_S_contig5605.15936.1 vs. uniprot
Match: UPI001CC142F1 (DUF11 domain-containing protein n=1 Tax=Nocardioides rotundus TaxID=1774216 RepID=UPI001CC142F1)

HSP 1 Score: 96.3 bits (238), Expect = 3.700e-19
Identity = 75/240 (31.25%), Postives = 108/240 (45.00%), Query Frame = 0
Query:    1 GDSFSCSPRVTILQSNVDAGSMGSTARATALTTLSTPVH-GSANTTVTFNREASLSCQANCTYVDSDDTNGPSAGDTISYVFDIENNGTTTVWSMVIDSGFVGPVVCSPPLESLELAPGGKTECTSTYQAN--DLDAGVVTSSVVVSAISPIG--------DKTARIEEAVEIERESSLAVGKYLSCTDGVVNAGDILLYSFTVTNTGQTCLAVLSVLDDNAGDVNCAFVANMAGEDMLC 229
            GDS  C+    + Q++VDAG++ +TA ATA       V  G +  T+  +  ++L  +      D  D      G+TI Y F + N G  TV  + +    VG V C     S  +APG   ECT+TY     D+DAG VT++   +  +P G        D T   +   +   E   A+       DG  + G+I+ Y+F VTNTG   L  + V D   G V+C       GE M C
Sbjct: 2187 GDSVECTASYVVTQADVDAGTVENTATATANRPDGEAVETGPSTETLPTDPASALMIEKTGVLSDGGDDELADVGETIDYTFKVTNTGNVTVTGIAVSDPKVGTVTCP----SDPVAPGASVECTATYTVTQGDIDAGAVTNTAKATGTAPGGNPVESEPDDNTLPADARADATLEKDGALRDRDG--DGRADVGEIIDYTFVVTNTGTVTLGDIEVRDPKVGQVDCPATTLAPGESMTC 2420          
BLAST of mRNA_Ecto-sp13_S_contig5605.15936.1 vs. uniprot
Match: A0A7Z0D8G2_9ACTN (Putative repeat protein (TIGR01451 family) n=1 Tax=Naumannella cuiyingiana TaxID=1347891 RepID=A0A7Z0D8G2_9ACTN)

HSP 1 Score: 95.9 bits (237), Expect = 5.210e-19
Identity = 74/228 (32.46%), Postives = 112/228 (49.12%), Query Frame = 0
Query:    1 GDSFSCSPRVTILQSNVDAGSMGSTARATALTTLSTPVHGSANTTVTFNREASLSCQANC-TYVDSDDTNGPSAGDTISYVFDIENNGTTTVWSMVIDSGFVGPVVCSPPLESLELAPGGKTECTSTY--QANDLDAGVVTSSVVVSAISPIGDKT-ARIEEAVEIERESSLAVGKYLSCTD-----GVVNAGDILLYSFTVTNTGQTCLAVLSVLDDNAGDVNCAFV 219
            G SF CS   T+ Q+++DA  + + A A       TPV GS       +++ +++        VD D +   +AGD I+Y FD+ N GT T+  +V+    VG + C       +LAPG    CT+TY    +D+DAG V ++  V+ + P+G    A    +V ++    L V K  S  +     GV +AGD + Y+FTVTNTG   L  + + D      NC  V
Sbjct: 4705 GQSFECSGTYTLTQADLDAAQVVNVADAVGTAPDGTPVSGSDRNVAPVSQDPAITLDKQAGPLVDIDGSGTATAGDQITYTFDVVNTGTVTLREVVVTDPKVG-LDCRTD----DLAPGEPLTCTATYTLSQDDVDAGSVENTASVAGLPPVGPTVGAEDSTSVPLDPAQGLTVDKRASAINDVNGNGVADAGDTIDYTFTVTNTGNVTLTGVELADPLVAIPNCPVV 4927          
BLAST of mRNA_Ecto-sp13_S_contig5605.15936.1 vs. uniprot
Match: UPI001FA9C18E (DUF11 domain-containing protein n=1 Tax=Nocardioides sp. SR21 TaxID=2919501 RepID=UPI001FA9C18E)

HSP 1 Score: 94.0 bits (232), Expect = 2.220e-18
Identity = 74/240 (30.83%), Postives = 107/240 (44.58%), Query Frame = 0
Query:    1 GDSFSCSPRV-TILQSNVDAGSMGSTARATALTTLSTPVHGSANTTVTFNREASLSCQANCTYVDSDDTNGPSAGDTISYVFDIENNGTTTVWSMVIDSGFVGPVVCSPPLESLELAPGGKTECTS---TYQANDLDAGVVTSSVVVSAISPIG-------DKTARIEEAVEIERESSLAVGKYLSCTDGVVNAGDILLYSFTVTNTGQTCLAVLSVLDDNAGDVNCAFVANMAGEDMLC 229
            G S SC+P+  T+LQS+VDA  + +TA A         V  +    +     A++        ++  D+NGP AGDTI+Y F + N GT T+  + +    VGP+ C     +  LAPG    CT    T   ND+D G V ++       P G         T  I     IE + +  VG  +       +AGD + Y F VTNTG   L  ++V D   G + C   A + G  + C
Sbjct:  575 GASVSCTPKAYTLLQSDVDAKKIENTATAHGSPPSGPEVTDTDTVNIALAGAAAIEVDKTAGTINDVDSNGPDAGDTITYSFVVTNTGTVTLNPVTVTDPKVGPITCP----ATPLAPGVSVNCTQKTYTLTQNDVDTGKVENTATAHGTPPSGPVVEDTDSTTTPIASLPSIELDKT--VGSIIDGDGNGPDAGDTVKYDFRVTNTGNVTLNPVTVTDPKVGPITCPPGALLPGASVDC 808          
BLAST of mRNA_Ecto-sp13_S_contig5605.15936.1 vs. uniprot
Match: A0A7K0CJ27_9ACTN (Uncharacterized protein n=2 Tax=Streptomyces smaragdinus TaxID=2585196 RepID=A0A7K0CJ27_9ACTN)

HSP 1 Score: 93.2 bits (230), Expect = 4.330e-18
Identity = 73/218 (33.49%), Postives = 118/218 (54.13%), Query Frame = 0
Query:    1 GDSFSCSPRVTILQSNVDAGSMGSTARATALTTLSTPVHGSANTTVTFNREASLSCQ--ANCTYVDSDDTNGPSAGDTISYVFDIENNGTTTVWSM-VIDSGFVG---PVVCSPPLESLELAPGGKTECTSTYQAN--DLDAGVVTSSVVVSAISPIGDKTARIEEAVEIERES--SLAVGKYLSCTDGVVNAGDILLYSFTVTNTGQTCLAVLSVLD 208
            G++ +C+   T++Q+++D GS+ +TA+AT     S      A+ T+T    + L  +  A  T VD+        G T++Y F   N G TT+  + +I++ F G   P+  S   ++  LAPGG T+C++TY+    DLDAG +T++    A +P GD T      V+++  +  SL + K     D V+ AGD + Y FTV NTG+T L  ++V D
Sbjct: 2879 GETLTCTAVYTLVQADIDQGSVANTAQATGAGVES----NEASVTLTGEPGSLLELEKSAEPTAVDT-------VGGTVTYTFTARNAGETTLTGLGIIENSFTGTGGPLAVS--CDATTLAPGGSTDCSATYEVTQADLDAGSITNTATARATTPSGDTTLSGSSTVDVDTTAPASLTLAKSAD-PDTVIGAGDTVTYHFTVHNTGRTTLHDIAVAD 3082          
BLAST of mRNA_Ecto-sp13_S_contig5605.15936.1 vs. uniprot
Match: A0A3C1FGK2_9ACTN (GRAM_POS_ANCHORING domain-containing protein (Fragment) n=1 Tax=Propionibacteriaceae bacterium TaxID=2021380 RepID=A0A3C1FGK2_9ACTN)

HSP 1 Score: 92.8 bits (229), Expect = 4.470e-18
Identity = 72/236 (30.51%), Postives = 110/236 (46.61%), Query Frame = 0
Query:    1 GDSFSCSPRVTILQSNVDAGSMGSTARATALTTLSTPVHGSANTTVTFNREASLSCQANCTYVDSDDTNGPSAGDTISYVFDIENNGTTTVWSMVIDSGFVGPVVCSPPLESLELAPGGKTECTSTYQAN--DLDAGVVTSSVVVSAISP-IGDKTARIEEAVEIERESSLAV----GKYLSCTDGVVNAGDILLYSFTVTNTGQTCLAVLSVLDDNAGDVNCAFVANMAGEDMLC 229
            G + SC+   T+ Q+++D GS+ +TA A   +    PV G +NT  T     ++        V +   +G  AGDT+ Y F + N G  T+  +VI    +  + C       +LAP   T CT +Y     D+DAG V +    SA +P  G  TA     V I     L +    G  +   +  V+ GD+L Y+FTVTNTG   +  +++ D    DV+C   +   GE + C
Sbjct:  170 GVATSCTGTYTLTQADIDNGSVTNTATADGTSPAGDPVSGISNTVNT-----NIVATPGIDLVKTGSASGERAGDTVDYSFTVSNTGNVTLTDLVISDPLISSISCP----QTQLAPTSATVCTGSYTLTQADVDAGSVHNDAEASADTPHSGTVTAADGTDVSIAPGPGLDLVKQAGAVIDVDNNGVDTGDLLPYTFTVTNTGNVTMTSVAIQDPKISDVSCPAGSLAPGETLSC 396          
BLAST of mRNA_Ecto-sp13_S_contig5605.15936.1 vs. uniprot
Match: UPI000701BDB3 (DUF11 domain-containing protein n=1 Tax=Aeromicrobium sp. Leaf245 TaxID=1736306 RepID=UPI000701BDB3)

HSP 1 Score: 92.0 bits (227), Expect = 1.060e-17
Identity = 85/242 (35.12%), Postives = 119/242 (49.17%), Query Frame = 0
Query:    3 SFSCSP-RVTILQSNVDAGSMGSTARATALTTLSTPVHGSANTTVT--FNREASLSCQANC-TYVDSDDTNGPSAGDTISYVFDIENNGTTTVWSM-VIDSGFVGPVVCSPPLESLELAPGGKTEC---TSTYQANDLDAGVVTSSVVVSAISPIGDK---TARIEEAVEIERESSLAVGKYLSCT----DGVVNAGDILLYSFTVTNTGQTCLAVLSVLDDNAGDVNCAFVANMAGEDMLC 229
            S +C P    + Q+ +DAG + + A ATAL      V G  + TVT   +RE ++       T  D DD   PSAGDTI++   +EN G  T+  + V+D    G V C    ES ELAPGG T C   T      D++AGV+ ++  V+A  P GD    TA  E +  + R ++  + K         DG V AGD ++Y+FTV NTG   L  ++V D   G V+C   A      + C
Sbjct: 1073 SVTCGPVSYPVTQAQLDAGEVVNAATATALG--QDGVVGPEDDTVTTSLDREPAVQLTKTAGTVQDLDDDRRPSAGDTITFDLAVENTGNVTLSDVSVVDPLLGGAVAC----ESDELAPGGTTPCGPVTYVLTQADVEAGVLRNTATVTADPPAGDAAKDTAGTETS--LARTATFTLDKQAGAVALGGDGRVGAGDAIIYTFTVRNTGNVALTDVAVTDPLVGVVDCTPDALAPDRSVTC 1306          
BLAST of mRNA_Ecto-sp13_S_contig5605.15936.1 vs. uniprot
Match: UPI002025909D (DUF11 domain-containing protein n=2 Tax=Aeromicrobium sp. Leaf245 TaxID=1736306 RepID=UPI002025909D)

HSP 1 Score: 92.0 bits (227), Expect = 1.110e-17
Identity = 85/242 (35.12%), Postives = 119/242 (49.17%), Query Frame = 0
Query:    3 SFSCSP-RVTILQSNVDAGSMGSTARATALTTLSTPVHGSANTTVT--FNREASLSCQANC-TYVDSDDTNGPSAGDTISYVFDIENNGTTTVWSM-VIDSGFVGPVVCSPPLESLELAPGGKTEC---TSTYQANDLDAGVVTSSVVVSAISPIGDK---TARIEEAVEIERESSLAVGKYLSCT----DGVVNAGDILLYSFTVTNTGQTCLAVLSVLDDNAGDVNCAFVANMAGEDMLC 229
            S +C P    + Q+ +DAG + + A ATAL      V G  + TVT   +RE ++       T  D DD   PSAGDTI++   +EN G  T+  + V+D    G V C    ES ELAPGG T C   T      D++AGV+ ++  V+A  P GD    TA  E +  + R ++  + K         DG V AGD ++Y+FTV NTG   L  ++V D   G V+C   A      + C
Sbjct: 5149 SVTCGPVSYPVTQAQLDAGEVVNAATATALG--QDGVVGPEDDTVTTSLDREPAVQLTKTAGTVQDLDDDRRPSAGDTITFDLAVENTGNVTLSDVSVVDPLLGGAVAC----ESDELAPGGTTPCGPVTYVLTQADVEAGVLRNTATVTADPPAGDAAKDTAGTETS--LARTATFTLDKQAGAVALGGDGRVGAGDAIIYTFTVRNTGNVALTDVAVTDPLVGVVDCTPDALAPDRSVTC 5382          
BLAST of mRNA_Ecto-sp13_S_contig5605.15936.1 vs. uniprot
Match: UPI001122A2F9 (GEVED domain-containing protein n=1 Tax=Nocardioides litoris TaxID=1926648 RepID=UPI001122A2F9)

HSP 1 Score: 91.7 bits (226), Expect = 1.510e-17
Identity = 77/245 (31.43%), Postives = 112/245 (45.71%), Query Frame = 0
Query:    2 DSFSCSPRVTILQSNVDAGSMGSTARATALTTLSTPVHGSANTTVTFNREASLSCQANCTYV--------DSDDTNGPSAGDTISYVFDIENNGTTTVWSMVIDSGFVGPVVCSPPLESLELAPGGKTECTSTYQAN--DLDAGVVTSSVVVSAISPIGDKTARIEEAVE--IERESSLAVGKYL-----SCTDGVVNAGDILLYSFTVTNTGQTCLAVLSVLDDNAGDVNCAFVANMAGEDMLC 229
            DS +C    TI Q++VDAGS+ +TA AT      TP  G+                AN   +        D D      AG+TI+Y F++ N G+ T+  + ++   V  V C     +  LAPG  T CT+TY     D++AG V ++       P G + +    +    I  + SL+V K       + TDG V+AGD + Y+F VTNTG   L  ++V D  AG V C       G+ + C
Sbjct: 3534 DSVTCVVVYTITQADVDAGSVVNTATATG-----TPPGGAXXXXXXXXXXXXXXXXANALTLVKRAAAPQDVDGDGRVEAGETIAYTFEVTNRGSQTLTGVAVNDARVAAVSCP----ATTLAPGQGTTCTATYTLTQADVNAGTVINTATAVGTPPFGPQVSSAPSSTTSTIAPQPSLSVDKQAGQVLDTNTDGRVDAGDTIGYTFAVTNTGNVTLTRVAVTDPKAGTVACPTTTLAPGQSITC 3769          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5605.15936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQK5_ECTSI2.770e-8888.76Transcriptional regulator, AraC family with Parall... [more]
A0A427SX95_9PSEU3.150e-2235.83DUF11 domain-containing protein n=3 Tax=Amycolatop... [more]
UPI001CC142F13.700e-1931.25DUF11 domain-containing protein n=1 Tax=Nocardioid... [more]
A0A7Z0D8G2_9ACTN5.210e-1932.46Putative repeat protein (TIGR01451 family) n=1 Tax... [more]
UPI001FA9C18E2.220e-1830.83DUF11 domain-containing protein n=1 Tax=Nocardioid... [more]
A0A7K0CJ27_9ACTN4.330e-1833.49Uncharacterized protein n=2 Tax=Streptomyces smara... [more]
A0A3C1FGK2_9ACTN4.470e-1830.51GRAM_POS_ANCHORING domain-containing protein (Frag... [more]
UPI000701BDB31.060e-1735.12DUF11 domain-containing protein n=1 Tax=Aeromicrob... [more]
UPI002025909D1.110e-1735.12DUF11 domain-containing protein n=2 Tax=Aeromicrob... [more]
UPI001122A2F91.510e-1731.43GEVED domain-containing protein n=1 Tax=Nocardioid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5605contigEcto-sp13_S_contig5605:842..2362 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5605.15936.1mRNA_Ecto-sp13_S_contig5605.15936.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5605 842..2362 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5605.15936.1 ID=prot_Ecto-sp13_S_contig5605.15936.1|Name=mRNA_Ecto-sp13_S_contig5605.15936.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=230bp
GDSFSCSPRVTILQSNVDAGSMGSTARATALTTLSTPVHGSANTTVTFNR
EASLSCQANCTYVDSDDTNGPSAGDTISYVFDIENNGTTTVWSMVIDSGF
VGPVVCSPPLESLELAPGGKTECTSTYQANDLDAGVVTSSVVVSAISPIG
DKTARIEEAVEIERESSLAVGKYLSCTDGVVNAGDILLYSFTVTNTGQTC
LAVLSVLDDNAGDVNCAFVANMAGEDMLC*
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