prot_Ecto-sp13_S_contig5603.15935.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig5603.15935.1
Unique Name	prot_Ecto-sp13_S_contig5603.15935.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	782

Homology

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BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: D7G787_ECTSI (Exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G787_ECTSI)

HSP 1 Score: 981 bits (2535), Expect = 0.000e+0
Identity = 673/792 (84.97%), Postives = 679/792 (85.73%), Query Frame = 0

Query:    1 MIPVDHPGHPAPAKYFADVLARSLCRETRARAWCEETSAYAPIKQKRCPVSLPEVMPIHCAAALESSEATKGAFAGKNIRGGTWLPQEIEISLLEREDGELCVVVGESADPPASWVQALEAEDDGKGATXXXXXXXXXXXXGPATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKREGWYFASPLTGKGGEAAIAXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGEGGAQEDRWVVDGVRQYRYRLMSVVSRVVPVVKGKKKXXXXXXXXXXXXXXXXXXXXXXXGTXXXXXGAGSSPGEADASIEEGHLVLHVRAPVLGGKSSSTDNTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTGGSDRSSGSXXXXXXXXXXXXXXXXXXXXA-----------VDVRDMTDTKGGGAXDGXXXXXXXXXXXXXXXXXXXXXXXXXXAWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKLDGGVSA 781
            MIPVDHPGHPAPAKYFADVLARSLCRETRARAWCEETSAYAPIKQKRCPVSLPEVMPIHCAAALESSEATKGAFAGKNIRGGTWLPQEIEISLLEREDGELCVVVGESADPPASWVQALEAED GKGAT XXXXXXXXXXX P TP           XXXXXXXXXXXXXXXXXXXXXXXXXXXX  REGWYFASPLTGK GEAAIAXXXXXXXXXXXXXX XXXXXXX                     E+G+GGA+EDRWVVDGVRQYRYRLMSVVSRVVPVVKGKKK XXXXXXXXXXXXXXXXXXXXXX  XXXXX  GSSPGEADA+IEEGHLVLHVRAPVLGGK SSTDNTAT    XXXXXXXXXXXXXXXXXXXXXX                TGG +  S  XXXXXXXXXXXXXXXXXXXX            VDVRDMTDT+GGGA DG                           WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEE ENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSE NAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKLDGGVSA
Sbjct:  294 MIPVDHPGHPAPAKYFADVLARSLCRETRARAWCEETSAYAPIKQKRCPVSLPEVMPIHCAAALESSEATKGAFAGKNIRGGTWLPQEIEISLLEREDGELCVVVGESADPPASWVQALEAED-GKGATTXXXXXXXXXXXXPTTPGDKKDTSTSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-REGWYFASPLTGKAGEAAIAXXXXXXXXXXXXXXXXXXXXXXARA------------------EEGDGGAREDRWVVDGVRQYRYRLMSVVSRVVPVVKGKKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSPGEADATIEEGHLVLHVRAPVLGGKPSSTDNTATPTKPXXXXXXXXXXXXXXXXXXXXXXAKGRREGGAAVASPGATGGKNGGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVRDMTDTEGGGAADGNASPGGGRDADRGTVRGEEEEEEE---WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEGENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEVNAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKLDGGVSA 1062

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BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: A0A6H5KX54_9PHAE (Exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX54_9PHAE)

HSP 1 Score: 962 bits (2487), Expect = 0.000e+0
Identity = 680/790 (86.08%), Postives = 687/790 (86.96%), Query Frame = 0

Query:    1 MIPVDHPGHPAPAKYFADVLARSLCRETRARAWCEETSAYAPIKQKRCPVSLPEVMPIHCAAALESSEATKGAFAGKNIRGGTWLPQEIEISLLEREDGELCVVVGESADPPASWVQALEAEDDGKGATXXXXXXXXXXXXGPATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK----REGWYFASPLTGKGGEAAIAXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGEGGAQEDRWVVDGVRQYRYRLMSVVSRVVPVVKGKKKXXXXXXXXXXXXXXXXXXXXXXXGTXXXXXGAGSSPGEADASIEEGHLVLHVRAPVLGGKSSSTDNTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTGGSDRSSGSXXXXXXXXXXXXXXXXXXXX-----AVDVRDMTDTKGGGAXDGXXXXXXXXXXXXXXXXXXXXXXXXXXAWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKLDGGVSA 781
            MIPVDHPGHPAPAKYFADVLARSLCRETRARAWCEETSAYAPIKQKRCPVSLPEVMPIHCAAALESSEATKGAFAGKNIRGGTWLPQEIEISLLEREDGELCVVVGESADPPASWVQA+EAEDDGKGAT            GP TP                    XXXXXXXXXXXXXXX     +    R+GWYFASPLTGK GEAAIA XXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXX      AQEDRWVVDGVRQYRYRLMSVVSRVVPVVKGKKK   XXXXXXXXXXX      XXX  XXX  GAGSSPGEADA+IEEGHLVLHVRAPVLGGKSSSTDNTATXXXXXXXXXXXXXXXXXXXXXXXXX   XXX           TGG       XXXXXXXXXXXXXXXXXXXX     AVDVRD+TDT   G X  XXXXXXXXXXXXXXXXXXXXXXXXXXAWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMAL +KRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGR+SGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKLDGGVSA
Sbjct:  851 MIPVDHPGHPAPAKYFADVLARSLCRETRARAWCEETSAYAPIKQKRCPVSLPEVMPIHCAAALESSEATKGAFAGKNIRGGTWLPQEIEISLLEREDGELCVVVGESADPPASWVQAMEAEDDGKGATTTTATAA-----GPTTPGVKKDASTPAGKAAAGTGTPXXXXXXXXXXXXXXXKGKPEQGKQERDGWYFASPLTGKAGEAAIAAXXXXXXXXXXXXGASAVPAXXXXXXXXXXXXXXXXXXXXXXX------AQEDRWVVDGVRQYRYRLMSVVSRVVPVVKGKKKAAGXXXXXXXXXXXAAAGTAXXX-XXXXGAGAGSSPGEADATIEEGHLVLHVRAPVLGGKSSSTDNTATXXXXXXXXXXXXXXXXXXXXXXXXXKGKXXXEGGAAVASPGGTGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVDVRDVTDT---GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALARKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRYSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKLDGGVSA 1625

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BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: A0A836CIT6_9STRA (Exonuclease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIT6_9STRA)

HSP 1 Score: 301 bits (770), Expect = 2.830e-91
Identity = 158/309 (51.13%), Postives = 207/309 (66.99%), Query Frame = 0

Query:  477 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATS-RHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGT--FSTTLDALYKYGWEVSWKL-DGGVSA 781
            WL+FND L ++T LDD RGFGP WK PC+L+YR      +E+E    A         LA+ P+VF I   ++N P  +   +PP++LPG+G +VA+DAEFV L +EE RLR DGS+VVTK  RQ LARVS +D       A   V++DDY++Q+EPV+DHLTRFSG+   DL+P  S R +L  +R  YL+LR L D GC+ +GHGL  D R+ NL +PPSQV+DT  +WSL G+RK SLRFL+HYLL   IQ  THDS+ED+R+ALAL  KY    A G+   +  LD LY+YG+ V WK+ D G +A
Sbjct:   84 WLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYR------DESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVD-------AEGQVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDMGPAA 379

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BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: K8ZCB7_NANGC (PAB-dependent poly(A)-specific ribonuclease subunit 2 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8ZCB7_NANGC)

HSP 1 Score: 273 bits (699), Expect = 2.240e-81
Identity = 160/332 (48.19%), Postives = 202/332 (60.84%), Query Frame = 0

Query:  477 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYR-RVPSA--------------------------EEEAEN-----ARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVR-LPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKL 775
            W + NDFLVE T+L+DA GF P WKEPC+L+YR R  +A                          EE+ EN     A  A  +A+     +I  S+F     S   P+      L P+ LPG+GD+V IDAEFV L +E + +   G++VV K+GRQ+LAR+S LD R         VM+DDYV+ SEPV+D+LTRFSGI   DLDP+ SRH+L   RT YL+LR L D G I +GHGL  DFR+ N+ +PP+QVIDTV LW L GQRKISLRFLA YLL  +IQGETHDSIEDAR A+ LY K+      G  +  L+ +Y+YG    WKL
Sbjct:   21 WYIVNDFLVEPTILEDALGFLPAWKEPCILLYRDRTSTAAAHAAWLEQLRAAGARVAGGGKREVGEEKGENDSSADASGAGGLAVGTLPPSIPVSIFASPSRSTATPLPPTFXXLTPEALPGRGDLVGIDAEFVQLEMETASVLETGARVVFKEGRQALARLSLLDVRSDQ------VMVDDYVLPSEPVMDYLTRFSGIVREDLDPSLSRHHLVTARTAYLKLRCLIDRGVILVGHGLKKDFRIINVYVPPAQVIDTVDLWCLEGQRKISLRFLAAYLLGESIQGETHDSIEDARTAVRLYQKWEEAKKEGKLAQVLNGVYEYGRTTGWKL 346

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BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: A0A4D9D4P1_9STRA (Exonuclease domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4P1_9STRA)

HSP 1 Score: 281 bits (719), Expect = 2.340e-78
Identity = 163/332 (49.10%), Postives = 205/332 (61.75%), Query Frame = 0

Query:  477 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYR-RVPSA--------------------------EEEAEN-----ARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVR-LPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKL 775
            W + NDFLVE T+L+DA GF P WKEPC+L+YR R  +A                          EE+AEN     A  A  +A+     +I  S+F    LS   P+      L P+ LPG+GD+V IDAEFV L +E + +   G++VV K+GRQ+LAR+S LD R         VM+DDYV+ SEPV+D+LTRFSGI P DLDP+ SRH+L   RT YL+LR L D G I +GHGL  DFR+ N+ +PP+QVIDTV LW L GQRKISLRFLA YLL  +IQGETHDSIEDAR A+ LY K+      G  +  L+ +Y+YG    WKL
Sbjct:  619 WYIVNDFLVEATILEDALGFLPTWKEPCILLYRDRTSTAAAHAAWLEQLRAVGARVAGGGKREVDEEKAENDSSTDASGAGGLAVGSLPPSIPVSIFASPSLSTATPLPPTFTPLTPEALPGRGDLVGIDAEFVQLEMETASVLETGARVVFKEGRQALARLSLLDVRSDQ------VMVDDYVLPSEPVMDYLTRFSGIVPEDLDPSLSRHHLVTARTAYLKLRCLIDRGVILVGHGLKKDFRIINVYVPPAQVIDTVDLWCLEGQRKISLRFLAAYLLGESIQGETHDSIEDARTAVRLYQKWEEAKKEGKLAQVLNGVYEYGRTTGWKL 944

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BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: A0A6G0XRY2_9STRA (Exonuclease domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRY2_9STRA)

HSP 1 Score: 274 bits (701), Expect = 2.220e-75
Identity = 149/299 (49.83%), Postives = 192/299 (64.21%), Query Frame = 0

Query:  477 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKL 775
            WL+ NDF V  +  DDA  F P+WK PCVL++ R  S  E              +  + I  S+F  APL+   P +  V +P  RLP +GD VAID EFV + +EE+ L+ DG+++VTK+ RQSLARVS L G          V++DDYV+ +EPVVD+LTRFSG+  GDLDP  SRHN+  ++T Y++LR+L DAGC+F+GHGL  DFR+ N+ +PP QVIDTV L+     RKI+LRFL+ YLLK  IQ ETHDSIEDAR AL L+NKY   V  G F  TL  +Y  G    WK+
Sbjct:  762 WLLCNDFSVTTSTEDDALDFSPQWKFPCVLLFSRGSSDYEST-----------VETSIQIPDSIFQAAPLN---PGAAAVEMP--RLPQRGDRVAIDTEFVIVEMEEAVLQTDGTRIVTKESRQSLARVSLLHGETDN------VIVDDYVLPNEPVVDYLTRFSGLVAGDLDPTQSRHNVVSLKTAYMKLRYLVDAGCVFVGHGLRKDFRIVNIFVPPEQVIDTVELYQQPSMRKIALRFLSAYLLKAEIQLETHDSIEDARAALKLHNKYLELVERGEFDKTLVEIYAAGRLCRWKI 1038

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BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: W4G622_9STRA (Exonuclease domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G622_9STRA)

HSP 1 Score: 273 bits (697), Expect = 8.730e-75
Identity = 148/299 (49.50%), Postives = 195/299 (65.22%), Query Frame = 0

Query:  477 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKL 775
            W++ NDF V  + +DDA  F P WK P VL++RR  S+   A             K + I  SVFD APL  N  V+ V++    +LP +GD VAID EFV + +EE+ L+ DG++VV K+ RQSLARVS + G     E +A+++ DDY++ +EPVVD+LTRFSG+T  DLDP  SRH +  ++T Y++LR+L DAGC+F+GHGL  DFR+ NL +PP Q+IDTV L+     RKI+LRFL  YLLK  IQ +THDSIEDAR AL L+NKY   VAA  F  TL  +Y  G    WK+
Sbjct:  769 WMLLNDFAVSTSTVDDAVNFSPPWKYPSVLLFRRASSSSLNA---------VADTKVVPIPSSVFDAAPL--NPSVASVIKAV--KLPKRGDRVAIDTEFVIVEMEEATLQTDGTRVVIKESRQSLARVSVIHG-----ETDAVIV-DDYILPNEPVVDYLTRFSGLTAEDLDPTRSRHAVVSLKTAYMKLRYLVDAGCLFVGHGLHKDFRIVNLFVPPDQIIDTVELYQQPNMRKIALRFLCAYLLKTEIQLDTHDSIEDARAALRLHNKYIELVAANDFDKTLAEIYSAGRHCRWKI 1048

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BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: A0A7S2HCK3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HCK3_9STRA)

HSP 1 Score: 258 bits (658), Expect = 1.370e-74
Identity = 152/343 (44.31%), Postives = 199/343 (58.02%), Query Frame = 0

Query:  477 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRR------VPSAEEEAENARRAAAM-----------------------------------ALTKK--RLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKLD 776
            WL+ NDF +++T   +A    P W+ PCV++Y++          E + E    AAA                                    +LT +  +L I  SVF+I  +S  + V ++     + LPG G  VA+D EFVS+ VEES +  DG++ V  + RQ LARVSA+D R +       V++DDY++ +EP+VD+ TRFSG+T  DLDP TS H+L H+RT YL+LR L D G IF+GHGL  DFR+ N+ +PPSQ+ DTV LW L GQRKISLRFLA  LL  +IQGETHDSIEDAR AL LY +Y     AG   TTL  LYKYG +  WK D
Sbjct:   66 WLLVNDFAIQRTDGFEAVDMDPAWRRPCVIIYKQKEPQXXXXXGEGDTEGGAVAAAAPVKAMANTSLGRSFVVEGERFISPVKGAGFRKNAPSLTARDLKLTIPDSVFEIPSISHIQ-VEKLTFRRCNLLPGHGTPVALDTEFVSVAVEESFIDADGAEHVNVEARQMLARVSAIDARTNE------VIIDDYILPTEPIVDYKTRFSGLTATDLDPLTSHHHLVHLRTAYLKLRLLVDKGAIFVGHGLRGDFRVVNMFVPPSQIADTVDLWYLPGQRKISLRFLAACLLDTDIQGETHDSIEDARGALLLYKRYIELQVAGKIDTTLQRLYKYGRKTGWKFD 401

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BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: A0A397BVH1_9STRA (Exonuclease domain-containing protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BVH1_9STRA)

HSP 1 Score: 257 bits (657), Expect = 2.130e-74
Identity = 143/299 (47.83%), Postives = 188/299 (62.88%), Query Frame = 0

Query:  477 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKL 775
            W++ NDF V  + +DDA  F P WK P VL++RR  S    A+            K + I  +VFD APL  N  V+ V++     LP +GD VAID EFV + +EE+ L+ DG++VV K+ RQSLARVS + G         +V++DDY++ +EPVVD+LTRFSG+T  DLDP  SRH +  ++T Y++LR+L DAGC+F+GHGL  DFR+ NL      +IDTV L+     RKI+LRFL  YLLK  IQ +THDSIEDAR AL L+NKY   VAA  F  TL  +Y  G    WK+
Sbjct:  146 WMLLNDFAVSTSTVDDAVNFSPPWKYPSVLLFRRASSPNAVADT-----------KVVPIPSTVFDAAPL--NPSVASVIKAV--TLPKRGDRVAIDTEFVIVEMEEATLQTDGTRVVIKESRQSLARVSVIHGETD------VVIVDDYILPNEPVVDYLTRFSGLTAEDLDPTRSRHAVVSLKTAYMKLRYLVDAGCLFVGHGLHKDFRIVNLF-----IIDTVELYQQPNMRKIALRFLCAYLLKTEIQLDTHDSIEDARAALRLHNKYIELVAANDFDKTLVEIYSAGRHCRWKI 418

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BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: A0A024UA66_9STRA (Exonuclease domain-containing protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UA66_9STRA)

HSP 1 Score: 268 bits (684), Expect = 5.630e-73
Identity = 146/299 (48.83%), Postives = 192/299 (64.21%), Query Frame = 0

Query:  477 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKL 775
            W++ NDF V ++ +DDA  F P WK P VL+YRR  S             +  T     I  ++FD APL+   P     R+    LP KGD VAID EFV + +EE+ L+ DG++VV K+ RQSLARVS + G     E +A V++DDY++ +EPVVD+LTRFSG+T  DLDPA SRH +  ++T Y++LR+L DAGC+F+GHGL  DFR+ N+ +PP+Q+IDTV L+     RKI+LRFL  YLLK  IQ +THDSIEDAR AL L+NKY   VA   F  TL  +Y  G    WK+
Sbjct:  777 WMLLNDFTVSESSVDDAINFSPPWKYPSVLLYRREGSP----------VVLDTTAPPAPIPSTIFDAAPLN---PTVARPRMSTVTLPKKGDRVAIDTEFVIVEMEEATLQTDGTRVVIKESRQSLARVSVIHG-----ETDA-VLVDDYILPNEPVVDYLTRFSGLTGEDLDPARSRHPVVSLKTAYMKLRYLVDAGCLFVGHGLHKDFRIVNIFVPPNQIIDTVELYQQPNMRKIALRFLCAYLLKAEIQLDTHDSIEDARAALRLHNKYLELVATNEFDKTLVEIYSAGRHCRWKI 1056

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G787_ECTSI	0.000e+0	84.97	Exonuclease domain-containing protein n=1 Tax=Ecto...	[more]
A0A6H5KX54_9PHAE	0.000e+0	86.08	Exonuclease domain-containing protein n=1 Tax=Ecto...	[more]
A0A836CIT6_9STRA	2.830e-91	51.13	Exonuclease-domain-containing protein n=1 Tax=Trib...	[more]
K8ZCB7_NANGC	2.240e-81	48.19	PAB-dependent poly(A)-specific ribonuclease subuni...	[more]
A0A4D9D4P1_9STRA	2.340e-78	49.10	Exonuclease domain-containing protein n=1 Tax=Nann...	[more]
A0A6G0XRY2_9STRA	2.220e-75	49.83	Exonuclease domain-containing protein n=1 Tax=Apha...	[more]
W4G622_9STRA	8.730e-75	49.50	Exonuclease domain-containing protein n=4 Tax=Apha...	[more]
A0A7S2HCK3_9STRA	1.370e-74	44.31	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A397BVH1_9STRA	2.130e-74	47.83	Exonuclease domain-containing protein (Fragment) n...	[more]
A0A024UA66_9STRA	5.630e-73	48.83	Exonuclease domain-containing protein n=4 Tax=Apha...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 568..754 e-value: 1.7E-23 score: 94.1
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 570..745 e-value: 1.4E-15 score: 58.3
IPR028881	PAN2 domain	PFAM	PF13423	UCH_1	coord: 11..97 e-value: 5.4E-10 score: 39.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 565..770 e-value: 2.1E-38 score: 133.6
None	No IPR available	GENE3D	3.90.70.10		coord: 2..116 e-value: 3.8E-6 score: 27.9 coord: 265..518 e-value: 9.6E-8 score: 33.1
None	No IPR available	PANTHER	PTHR15728	UBIQUITIN SPECIFIC PROTEASE 52 / POLY A RIBONUCLEASE SUBUNIT PAN2	coord: 464..775 coord: 11..96
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 565..749

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig5603	contig	Ecto-sp13_S_contig5603:528..7361 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig5603.15935.1	mRNA_Ecto-sp13_S_contig5603.15935.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig5603 473..8198 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig5603.15935.1 ID=prot_Ecto-sp13_S_contig5603.15935.1|Name=mRNA_Ecto-sp13_S_contig5603.15935.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=782bp
MIPVDHPGHPAPAKYFADVLARSLCRETRARAWCEETSAYAPIKQKRCPV
SLPEVMPIHCAAALESSEATKGAFAGKNIRGGTWLPQEIEISLLEREDGE
LCVVVGESADPPASWVQALEAEDDGKGATTTAAAAAAAAAEGPATPGAKK
DASTSAGKAAAGTGTPSKQQQPPTPPRKDKPEQEEQKREGWYFASPLTGK
GGEAAIAAAAAAAAAAAAAAGVGASSVPAAAAGAVPDAKAGAGAGAGAGA
EDGEGGAQEDRWVVDGVRQYRYRLMSVVSRVVPVVKGKKKAAGAAAAAEG
GGSGGAAAAAAAAGTAAAGAGAGSSPGEADASIEEGHLVLHVRAPVLGGK
SSSTDNTATPTKPPPPPPAAKNDAKKDGGGKGKGRREGGAAAASSGASGG
KTGGSDRSSGSSSSGSGSGSGKGGAAAPAAAAVDVRDMTDTKGGGAADGN
ASPGGGGDADGGTVGGEKEEEEEEEAWLMFNDFLVEKTVLDDARGFGPEW
KEPCVLVYRRVPSAEEEAENARRAAAMALTKKRLAITPSVFDIAPLSKNR
PVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQ
SLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDP
ATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVID
TVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRS
HVAAGTFSTTLDALYKYGWEVSWKLDGGVSA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013520	Exonuclease_RNaseT/DNA_pol3
IPR028881	PAN2_dom
IPR036397	RNaseH_sf
IPR012337	RNaseH-like_sf