mRNA_Ecto-sp13_S_contig5603.15935.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: D7G787_ECTSI (Exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G787_ECTSI) HSP 1 Score: 1060 bits (2740), Expect = 0.000e+0 Identity = 713/832 (85.70%), Postives = 719/832 (86.42%), Query Frame = 1
Query: 190 KRSGSTVDRLYGYGTRTSNAFLHDKRTTIDVKHTRTLVTEMIPVDHPGHPAPAKYFADVLARSLCRETRARAWCEETSAYAPIKQKRCPVSLPEVMPIHCAAALESSEATKGAFAGKNIRGGTWLPQEIEISLLEREDGELCVVVGESADPPASWVQALEAEDDGKGATXXXXXXXXXXXXGPATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKREGWYFASPLTGKGGEAAIAXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGEGGAQEDRWVVDGVRQYRYRLMSVVSRVVPVVKGKKKXXXXXXXXXXXXXXXXXXXXXXXGTXXXXXGAGSSPGEADASIEEGHLVLHVRAPVLGGKSSSTDNTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTGGSDRSSGSXXXXXXXXXXXXXXXXXXXXA-----------VDVRDMTDTKGGGAXDGXXXXXXXXXXXXXXXXXXXXXXXXXXAWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKLDGGVSA 2652
KRSGSTVDRLYGYGTRTSNAFLHDKRTTIDVKHTRTLVTEMIPVDHPGHPAPAKYFADVLARSLCRETRARAWCEETSAYAPIKQKRCPVSLPEVMPIHCAAALESSEATKGAFAGKNIRGGTWLPQEIEISLLEREDGELCVVVGESADPPASWVQALEAED GKGAT XXXXXXXXXXX P TP XXXXXXXXXXXXXXXXXXXXXXXXXXXX REGWYFASPLTGK GEAAIAXXXXXXXXXXXXXX XXXXXXX E+G+GGA+EDRWVVDGVRQYRYRLMSVVSRVVPVVKGKKK XXXXXXXXXXXXXXXXXXXXXX XXXXX GSSPGEADA+IEEGHLVLHVRAPVLGGK SSTDNTAT XXXXXXXXXXXXXXXXXXXXXX TGG + S XXXXXXXXXXXXXXXXXXXX VDVRDMTDT+GGGA DG WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEE ENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSE NAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKLDGGVSA
Sbjct: 254 KRSGSTVDRLYGYGTRTSNAFLHDKRTTIDVKHTRTLVTEMIPVDHPGHPAPAKYFADVLARSLCRETRARAWCEETSAYAPIKQKRCPVSLPEVMPIHCAAALESSEATKGAFAGKNIRGGTWLPQEIEISLLEREDGELCVVVGESADPPASWVQALEAED-GKGATTXXXXXXXXXXXXPTTPGDKKDTSTSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-REGWYFASPLTGKAGEAAIAXXXXXXXXXXXXXXXXXXXXXXARA------------------EEGDGGAREDRWVVDGVRQYRYRLMSVVSRVVPVVKGKKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSPGEADATIEEGHLVLHVRAPVLGGKPSSTDNTATPTKPXXXXXXXXXXXXXXXXXXXXXXAKGRREGGAAVASPGATGGKNGGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVRDMTDTEGGGAADGNASPGGGRDADRGTVRGEEEEEEE---WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEGENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEVNAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKLDGGVSA 1062
BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: A0A6H5KX54_9PHAE (Exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX54_9PHAE) HSP 1 Score: 1040 bits (2689), Expect = 0.000e+0 Identity = 719/830 (86.63%), Postives = 727/830 (87.59%), Query Frame = 1
Query: 190 KRSGSTVDRLYGYGTRTSNAFLHDKRTTIDVKHTRTLVTEMIPVDHPGHPAPAKYFADVLARSLCRETRARAWCEETSAYAPIKQKRCPVSLPEVMPIHCAAALESSEATKGAFAGKNIRGGTWLPQEIEISLLEREDGELCVVVGESADPPASWVQALEAEDDGKGATXXXXXXXXXXXXGPATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK----REGWYFASPLTGKGGEAAIAXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGEGGAQEDRWVVDGVRQYRYRLMSVVSRVVPVVKGKKKXXXXXXXXXXXXXXXXXXXXXXXGTXXXXXGAGSSPGEADASIEEGHLVLHVRAPVLGGKSSSTDNTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTGGSDRSSGSXXXXXXXXXXXXXXXXXXXX-----AVDVRDMTDTKGGGAXDGXXXXXXXXXXXXXXXXXXXXXXXXXXAWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKLDGGVSA 2652
KRSGSTVDRLYGYGTRTSNAFLHDK+TTIDVKHTRTLVTEMIPVDHPGHPAPAKYFADVLARSLCRETRARAWCEETSAYAPIKQKRCPVSLPEVMPIHCAAALESSEATKGAFAGKNIRGGTWLPQEIEISLLEREDGELCVVVGESADPPASWVQA+EAEDDGKGAT GP TP XXXXXXXXXXXXXXX + R+GWYFASPLTGK GEAAIA XXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX AQEDRWVVDGVRQYRYRLMSVVSRVVPVVKGKKK XXXXXXXXXXX XXX XXX GAGSSPGEADA+IEEGHLVLHVRAPVLGGKSSSTDNTATXXXXXXXXXXXXXXXXXXXXXXXXX XXX TGG XXXXXXXXXXXXXXXXXXXX AVDVRD+TDT G X XXXXXXXXXXXXXXXXXXXXXXXXXXAWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMAL +KRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGR+SGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKLDGGVSA
Sbjct: 811 KRSGSTVDRLYGYGTRTSNAFLHDKKTTIDVKHTRTLVTEMIPVDHPGHPAPAKYFADVLARSLCRETRARAWCEETSAYAPIKQKRCPVSLPEVMPIHCAAALESSEATKGAFAGKNIRGGTWLPQEIEISLLEREDGELCVVVGESADPPASWVQAMEAEDDGKGATTTTATAA-----GPTTPGVKKDASTPAGKAAAGTGTPXXXXXXXXXXXXXXXKGKPEQGKQERDGWYFASPLTGKAGEAAIAAXXXXXXXXXXXXGASAVPAXXXXXXXXXXXXXXXXXXXXXXX------AQEDRWVVDGVRQYRYRLMSVVSRVVPVVKGKKKAAGXXXXXXXXXXXAAAGTAXXX-XXXXGAGAGSSPGEADATIEEGHLVLHVRAPVLGGKSSSTDNTATXXXXXXXXXXXXXXXXXXXXXXXXXKGKXXXEGGAAVASPGGTGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVDVRDVTDT---GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALARKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRYSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKLDGGVSA 1625
BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: A0A836CIT6_9STRA (Exonuclease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIT6_9STRA) HSP 1 Score: 300 bits (768), Expect = 6.310e-90 Identity = 155/302 (51.32%), Postives = 203/302 (67.22%), Query Frame = 1
Query: 1738 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATS-RHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGT--FSTTLDALYKYGWEVSWKL 2634
WL+FND L ++T LDD RGFGP WK PC+L+YR +E+E A LA+ P+VF I ++N P + +PP++LPG+G +VA+DAEFV L +EE RLR DGS+VVTK RQ LARVS +D A V++DDY++Q+EPV+DHLTRFSG+ DL+P S R +L +R YL+LR L D GC+ +GHGL D R+ NL +PPSQV+DT +WSL G+RK SLRFL+HYLL IQ THDS+ED+R+ALAL KY A G+ + LD LY+YG+ V WK+
Sbjct: 84 WLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYR------DESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVD-------AEGQVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKV 372
BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: K8ZCB7_NANGC (PAB-dependent poly(A)-specific ribonuclease subunit 2 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8ZCB7_NANGC) HSP 1 Score: 273 bits (698), Expect = 2.680e-80 Identity = 160/332 (48.19%), Postives = 202/332 (60.84%), Query Frame = 1
Query: 1738 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYR-RVPSA--------------------------EEEAEN-----ARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVR-LPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKL 2634
W + NDFLVE T+L+DA GF P WKEPC+L+YR R +A EE+ EN A A +A+ +I S+F S P+ L P+ LPG+GD+V IDAEFV L +E + + G++VV K+GRQ+LAR+S LD R VM+DDYV+ SEPV+D+LTRFSGI DLDP+ SRH+L RT YL+LR L D G I +GHGL DFR+ N+ +PP+QVIDTV LW L GQRKISLRFLA YLL +IQGETHDSIEDAR A+ LY K+ G + L+ +Y+YG WKL
Sbjct: 21 WYIVNDFLVEPTILEDALGFLPAWKEPCILLYRDRTSTAAAHAAWLEQLRAAGARVAGGGKREVGEEKGENDSSADASGAGGLAVGTLPPSIPVSIFASPSRSTATPLPPTFXXLTPEALPGRGDLVGIDAEFVQLEMETASVLETGARVVFKEGRQALARLSLLDVRSDQ------VMVDDYVLPSEPVMDYLTRFSGIVREDLDPSLSRHHLVTARTAYLKLRCLIDRGVILVGHGLKKDFRIINVYVPPAQVIDTVDLWCLEGQRKISLRFLAAYLLGESIQGETHDSIEDARTAVRLYQKWEEAKKEGKLAQVLNGVYEYGRTTGWKL 346
BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: A0A4D9D4P1_9STRA (Exonuclease domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4P1_9STRA) HSP 1 Score: 281 bits (718), Expect = 3.030e-77 Identity = 163/332 (49.10%), Postives = 205/332 (61.75%), Query Frame = 1
Query: 1738 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYR-RVPSA--------------------------EEEAEN-----ARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVR-LPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKL 2634
W + NDFLVE T+L+DA GF P WKEPC+L+YR R +A EE+AEN A A +A+ +I S+F LS P+ L P+ LPG+GD+V IDAEFV L +E + + G++VV K+GRQ+LAR+S LD R VM+DDYV+ SEPV+D+LTRFSGI P DLDP+ SRH+L RT YL+LR L D G I +GHGL DFR+ N+ +PP+QVIDTV LW L GQRKISLRFLA YLL +IQGETHDSIEDAR A+ LY K+ G + L+ +Y+YG WKL
Sbjct: 619 WYIVNDFLVEATILEDALGFLPTWKEPCILLYRDRTSTAAAHAAWLEQLRAVGARVAGGGKREVDEEKAENDSSTDASGAGGLAVGSLPPSIPVSIFASPSLSTATPLPPTFTPLTPEALPGRGDLVGIDAEFVQLEMETASVLETGARVVFKEGRQALARLSLLDVRSDQ------VMVDDYVLPSEPVMDYLTRFSGIVPEDLDPSLSRHHLVTARTAYLKLRCLIDRGVILVGHGLKKDFRIINVYVPPAQVIDTVDLWCLEGQRKISLRFLAAYLLGESIQGETHDSIEDARTAVRLYQKWEEAKKEGKLAQVLNGVYEYGRTTGWKL 944
BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: A0A6G0XRY2_9STRA (Exonuclease domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRY2_9STRA) HSP 1 Score: 274 bits (700), Expect = 2.660e-74 Identity = 149/299 (49.83%), Postives = 192/299 (64.21%), Query Frame = 1
Query: 1738 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKL 2634
WL+ NDF V + DDA F P+WK PCVL++ R S E + + I S+F APL+ P + V +P RLP +GD VAID EFV + +EE+ L+ DG+++VTK+ RQSLARVS L G V++DDYV+ +EPVVD+LTRFSG+ GDLDP SRHN+ ++T Y++LR+L DAGC+F+GHGL DFR+ N+ +PP QVIDTV L+ RKI+LRFL+ YLLK IQ ETHDSIEDAR AL L+NKY V G F TL +Y G WK+
Sbjct: 762 WLLCNDFSVTTSTEDDALDFSPQWKFPCVLLFSRGSSDYEST-----------VETSIQIPDSIFQAAPLN---PGAAAVEMP--RLPQRGDRVAIDTEFVIVEMEEAVLQTDGTRIVTKESRQSLARVSLLHGETDN------VIVDDYVLPNEPVVDYLTRFSGLVAGDLDPTQSRHNVVSLKTAYMKLRYLVDAGCVFVGHGLRKDFRIVNIFVPPEQVIDTVELYQQPSMRKIALRFLSAYLLKAEIQLETHDSIEDARAALKLHNKYLELVERGEFDKTLVEIYAAGRLCRWKI 1038
BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: W4G622_9STRA (Exonuclease domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G622_9STRA) HSP 1 Score: 272 bits (696), Expect = 1.030e-73 Identity = 148/299 (49.50%), Postives = 195/299 (65.22%), Query Frame = 1
Query: 1738 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKL 2634
W++ NDF V + +DDA F P WK P VL++RR S+ A K + I SVFD APL N V+ V++ +LP +GD VAID EFV + +EE+ L+ DG++VV K+ RQSLARVS + G E +A+++ DDY++ +EPVVD+LTRFSG+T DLDP SRH + ++T Y++LR+L DAGC+F+GHGL DFR+ NL +PP Q+IDTV L+ RKI+LRFL YLLK IQ +THDSIEDAR AL L+NKY VAA F TL +Y G WK+
Sbjct: 769 WMLLNDFAVSTSTVDDAVNFSPPWKYPSVLLFRRASSSSLNA---------VADTKVVPIPSSVFDAAPL--NPSVASVIKAV--KLPKRGDRVAIDTEFVIVEMEEATLQTDGTRVVIKESRQSLARVSVIHG-----ETDAVIV-DDYILPNEPVVDYLTRFSGLTAEDLDPTRSRHAVVSLKTAYMKLRYLVDAGCLFVGHGLHKDFRIVNLFVPPDQIIDTVELYQQPNMRKIALRFLCAYLLKTEIQLDTHDSIEDARAALRLHNKYIELVAANDFDKTLAEIYSAGRHCRWKI 1048
BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: A0A7S2HCK3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HCK3_9STRA) HSP 1 Score: 257 bits (657), Expect = 1.350e-73 Identity = 152/343 (44.31%), Postives = 199/343 (58.02%), Query Frame = 1
Query: 1738 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRR------VPSAEEEAENARRAAAM-----------------------------------ALTKK--RLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKLD 2637
WL+ NDF +++T +A P W+ PCV++Y++ E + E AAA +LT + +L I SVF+I +S + V ++ + LPG G VA+D EFVS+ VEES + DG++ V + RQ LARVSA+D R + V++DDY++ +EP+VD+ TRFSG+T DLDP TS H+L H+RT YL+LR L D G IF+GHGL DFR+ N+ +PPSQ+ DTV LW L GQRKISLRFLA LL +IQGETHDSIEDAR AL LY +Y AG TTL LYKYG + WK D
Sbjct: 66 WLLVNDFAIQRTDGFEAVDMDPAWRRPCVIIYKQKEPQXXXXXGEGDTEGGAVAAAAPVKAMANTSLGRSFVVEGERFISPVKGAGFRKNAPSLTARDLKLTIPDSVFEIPSISHIQ-VEKLTFRRCNLLPGHGTPVALDTEFVSVAVEESFIDADGAEHVNVEARQMLARVSAIDARTNE------VIIDDYILPTEPIVDYKTRFSGLTATDLDPLTSHHHLVHLRTAYLKLRLLVDKGAIFVGHGLRGDFRVVNMFVPPSQIADTVDLWYLPGQRKISLRFLAACLLDTDIQGETHDSIEDARGALLLYKRYIELQVAGKIDTTLQRLYKYGRKTGWKFD 401
BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: A0A397BVH1_9STRA (Exonuclease domain-containing protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BVH1_9STRA) HSP 1 Score: 257 bits (656), Expect = 2.100e-73 Identity = 143/299 (47.83%), Postives = 188/299 (62.88%), Query Frame = 1
Query: 1738 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKL 2634
W++ NDF V + +DDA F P WK P VL++RR S A+ K + I +VFD APL N V+ V++ LP +GD VAID EFV + +EE+ L+ DG++VV K+ RQSLARVS + G +V++DDY++ +EPVVD+LTRFSG+T DLDP SRH + ++T Y++LR+L DAGC+F+GHGL DFR+ NL +IDTV L+ RKI+LRFL YLLK IQ +THDSIEDAR AL L+NKY VAA F TL +Y G WK+
Sbjct: 146 WMLLNDFAVSTSTVDDAVNFSPPWKYPSVLLFRRASSPNAVADT-----------KVVPIPSTVFDAAPL--NPSVASVIKAV--TLPKRGDRVAIDTEFVIVEMEEATLQTDGTRVVIKESRQSLARVSVIHGETD------VVIVDDYILPNEPVVDYLTRFSGLTAEDLDPTRSRHAVVSLKTAYMKLRYLVDAGCLFVGHGLHKDFRIVNLF-----IIDTVELYQQPNMRKIALRFLCAYLLKTEIQLDTHDSIEDARAALRLHNKYIELVAANDFDKTLVEIYSAGRHCRWKI 418
BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Match: A0A024UA66_9STRA (Exonuclease domain-containing protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UA66_9STRA) HSP 1 Score: 267 bits (683), Expect = 6.250e-72 Identity = 146/299 (48.83%), Postives = 192/299 (64.21%), Query Frame = 1
Query: 1738 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATSRHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGTFSTTLDALYKYGWEVSWKL 2634
W++ NDF V ++ +DDA F P WK P VL+YRR S + T I ++FD APL+ P R+ LP KGD VAID EFV + +EE+ L+ DG++VV K+ RQSLARVS + G E +A V++DDY++ +EPVVD+LTRFSG+T DLDPA SRH + ++T Y++LR+L DAGC+F+GHGL DFR+ N+ +PP+Q+IDTV L+ RKI+LRFL YLLK IQ +THDSIEDAR AL L+NKY VA F TL +Y G WK+
Sbjct: 777 WMLLNDFTVSESSVDDAINFSPPWKYPSVLLYRREGSP----------VVLDTTAPPAPIPSTIFDAAPLN---PTVARPRMSTVTLPKKGDRVAIDTEFVIVEMEEATLQTDGTRVVIKESRQSLARVSVIHG-----ETDA-VLVDDYILPNEPVVDYLTRFSGLTGEDLDPARSRHPVVSLKTAYMKLRYLVDAGCLFVGHGLHKDFRIVNIFVPPNQIIDTVELYQQPNMRKIALRFLCAYLLKAEIQLDTHDSIEDARAALRLHNKYLELVATNEFDKTLVEIYSAGRHCRWKI 1056 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5603.15935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig5603.15935.1 >prot_Ecto-sp13_S_contig5603.15935.1 ID=prot_Ecto-sp13_S_contig5603.15935.1|Name=mRNA_Ecto-sp13_S_contig5603.15935.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=782bp MIPVDHPGHPAPAKYFADVLARSLCRETRARAWCEETSAYAPIKQKRCPVback to top mRNA from alignment at Ecto-sp13_S_contig5603:473..8198- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig5603.15935.1 ID=mRNA_Ecto-sp13_S_contig5603.15935.1|Name=mRNA_Ecto-sp13_S_contig5603.15935.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7726bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5603:473..8198- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig5603:473..8198- >mRNA_Ecto-sp13_S_contig5603.15935.1 ID=mRNA_Ecto-sp13_S_contig5603.15935.1|Name=mRNA_Ecto-sp13_S_contig5603.15935.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2346bp|location=Sequence derived from alignment at Ecto-sp13_S_contig5603:473..8198- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |