prot_Ecto-sp13_S_contig5602.15934.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5602.15934.1
Unique Nameprot_Ecto-sp13_S_contig5602.15934.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length98
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5602.15934.1 vs. uniprot
Match: A0A6H5JKJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKJ9_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 1.260e-50
Identity = 85/98 (86.73%), Postives = 90/98 (91.84%), Query Frame = 0 
Query:    1 MSAAAVARCLRAVPAARAARSMVAFSRNNVGGVYQQVPIAPACPQPDLLASVVRQLAGCRVDGIMLHAAAQGDFVPAVPVMEAVNRNARRPKKVSGSK 98
            MSAAAVARCLRAVPA RAARSMVA SRNNVGGVYQQVP+APACPQPDLLAS+VRQL GCRVDGIML+AAAQGDF+P VP MEAVNRNARRPKK +  K
Sbjct:    1 MSAAAVARCLRAVPAVRAARSMVALSRNNVGGVYQQVPVAPACPQPDLLASLVRQLDGCRVDGIMLNAAAQGDFLPVVPAMEAVNRNARRPKKANHGK 98
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5602.15934.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JKJ9_9PHAE1.260e-5086.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5602contigEcto-sp13_S_contig5602:6506..6799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5602.15934.1mRNA_Ecto-sp13_S_contig5602.15934.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5602 6506..6799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5602.15934.1 ID=prot_Ecto-sp13_S_contig5602.15934.1|Name=mRNA_Ecto-sp13_S_contig5602.15934.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=98bp
MSAAAVARCLRAVPAARAARSMVAFSRNNVGGVYQQVPIAPACPQPDLLA
SVVRQLAGCRVDGIMLHAAAQGDFVPAVPVMEAVNRNARRPKKVSGSK
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