prot_Ecto-sp13_S_contig5602.15933.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5602.15933.1
Unique Nameprot_Ecto-sp13_S_contig5602.15933.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length321
Homology
BLAST of mRNA_Ecto-sp13_S_contig5602.15933.1 vs. uniprot
Match: D7FQY7_ECTSI (Ubiquitin-conjugating enzyme n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY7_ECTSI)

HSP 1 Score: 605 bits (1561), Expect = 2.310e-218
Identity = 306/316 (96.84%), Postives = 309/316 (97.78%), Query Frame = 0
Query:    5 PATLAFLCLVVHSSTSAAASTCRGGAPSRAFLAHGRRSSALTSSHARSCNPGPTTQEESGHGEDALETFALVVRGGSDEDPSLTTLFMRVLMPGFRRDKGGDGELDLKGGGLMRRLKRLVSGVFRKVRGLPVASTEPKGEGKNVATKKKSKGKAKGATTTSHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNAAHAEARPGQAQQWIYHDDLC 320
            PATLAFLCLV HSSTSAAASTC+GGAPSRAFLAHGRRSSALTSS+ARSCNPGPTTQ ESGHGEDALETFALVVRGGSDEDPSLTTLFMRVLMPGFRRDKGGDGELDL+GGGLMRRLKRLVSGVFRKVRG PV  TEPKGE KNVATKKKSKGKAKGATTTSHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNA HAEARPGQAQQWIYHDDLC
Sbjct:    2 PATLAFLCLVAHSSTSAAASTCQGGAPSRAFLAHGRRSSALTSSNARSCNPGPTTQGESGHGEDALETFALVVRGGSDEDPSLTTLFMRVLMPGFRRDKGGDGELDLEGGGLMRRLKRLVSGVFRKVRGSPVPITEPKGEAKNVATKKKSKGKAKGATTTSHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNATHAEARPGQAQQWIYHDDLC 317          
BLAST of mRNA_Ecto-sp13_S_contig5602.15933.1 vs. uniprot
Match: A0A835ZFF1_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFF1_9STRA)

HSP 1 Score: 261 bits (668), Expect = 5.600e-82
Identity = 140/255 (54.90%), Postives = 176/255 (69.02%), Query Frame = 0
Query:   71 ETFALVVRGGSDEDPSLTTLFMRVLMPGFRRDKGGD---GELDLKGG--GLMRRLKRLVSGVFRKVRGLPVASTEPKGEGKNVATKKKSKGKAKGATTTSHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNAAHAEARPGQAQQ-WIYHDDL 319
            E   L++RGG     S   LFM++ +PG+  D  GD   G+  L     GL +R+KR +S +F   +  P    +  G+GK         G +K  T   HL   +RPG+ANYRIQKEL+EFM NPP+ C+VSVGK+++VWIITI+GA+GTI+ GEKF+LRV FPE YP KPP+VYFLQ PPPP+H+H+YTNGDICLSLL  +DW PNLT  +LALSILSMLSSAKEKR P DN  +A  RPGQ+Q  WIYHD+ 
Sbjct:  123 EQRGLMLRGGGKGSLSKFQLFMQIFIPGYGEDAAGDDGDGKAALTSAQPGLAKRVKRFLSALFSGGKKQPTKGAKG-GKGKG--------GSSKDDTVGKHLASKHRPGDANYRIQKELQEFMKNPPEGCQVSVGKSLKVWIITITGAKGTIFEGEKFKLRVGFPENYPLKPPSVYFLQDPPPPEHEHVYTNGDICLSLLG-KDWTPNLTASALALSILSMLSSAKEKRRPADNFQNANRRPGQSQDSWIYHDNF 367          
BLAST of mRNA_Ecto-sp13_S_contig5602.15933.1 vs. uniprot
Match: A0A0G4GVI6_9ALVE (UBC core domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GVI6_9ALVE)

HSP 1 Score: 221 bits (563), Expect = 2.050e-68
Identity = 108/170 (63.53%), Postives = 133/170 (78.24%), Query Frame = 0
Query:  152 KKSKGKAKGATTTSHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNAAHAEARPG-QAQQWIYHDDLC 320
            KKS GK K   T++HL+  + PGN NYRIQKELKEF+ +PP  C+VSVG N+R WIITI G EGT+Y  E ++L+V FP+EYP  PP+VYFL+  P P+H H+YTNGDICL+LL + DWKP LTV ++AL+ILSMLSSAKEK++P DNAAHAEA PG Q   W+YHDD C
Sbjct:   36 KKSGGKKKADATSNHLKAKWTPGNPNYRIQKELKEFIKSPPPNCRVSVGSNLRAWIITIKGVEGTLYEKETYKLKVVFPDEYPLVPPSVYFLR--PAPRHPHVYTNGDICLNLLGT-DWKPTLTVSAIALAILSMLSSAKEKKIPLDNAAHAEAPPGGQQHNWMYHDDKC 202          
BLAST of mRNA_Ecto-sp13_S_contig5602.15933.1 vs. uniprot
Match: A0A0G4GQN8_VITBC (UBC core domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GQN8_VITBC)

HSP 1 Score: 220 bits (560), Expect = 6.630e-68
Identity = 101/156 (64.74%), Postives = 128/156 (82.05%), Query Frame = 0
Query:  166 HLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNAAHAEARPG-QAQQWIYHDDLC 320
            HL +++RPG+ NYRIQKELK+F+  PPD C+++VG NIRVWIIT++G EGT+Y GEK+RL++ FP EYP KPP +YFLQ  P P+H H+Y+NGDICL+LL + DWKP LTV S+ALSILSMLSSAKEK+LP DNA+HA+ + G Q   W+YHDD C
Sbjct:   54 HLRRSFRPGHVNYRIQKELKDFLTTPPDHCEIAVGSNIRVWIITLTGVEGTLYEGEKYRLKIVFPPEYPLKPPIIYFLQ--PTPRHPHVYSNGDICLNLLGT-DWKPTLTVASVALSILSMLSSAKEKKLPLDNASHADLKAGGQQHNWMYHDDKC 206          
BLAST of mRNA_Ecto-sp13_S_contig5602.15933.1 vs. uniprot
Match: W7U274_9STRA (Ubiquitin-conjugating enzyme n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U274_9STRA)

HSP 1 Score: 216 bits (551), Expect = 4.320e-65
Identity = 116/252 (46.03%), Postives = 163/252 (64.68%), Query Frame = 0
Query:   70 LETFALVVRGGSDEDPSLTTLFMRVLMPGFRRDKGGDGELDLKGGGLMRRLKRLVSGVFRKVRGLPVASTEPKGEGKNVATKKKSKGKAKGATTTSHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNAAHAEARPGQAQ-QWIYHDDLC 320
            L T     RGG+ +  SL    MR      +R           GG +  R+KR + G+     G        +   ++ +      G+  G     HL K +R GNAN+R+QKEL+E++ANP +  +V+VG NIRVW++T++GA+GTI+AGEK++L+ +FP +YP+KPP+VYFLQ  PPP+H+H+YTNGDICL+LL  RDW+PN+T   LALSILSMLSSA+EK++P+DN  HA+  PG+ Q  W+YHDD C
Sbjct:   78 LITLLAQKRGGALQSSSLLGRIMRAWRGSAKR-----------GGSIHGRIKRFL-GLLWNAAGSSAGHDVKRSTIRSGSLGGVGGGRLGGNRMQKHLGKEFRRGNANFRVQKELREWLANPTENLQVAVGDNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQ--PPPRHEHVYTNGDICLNLLG-RDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC 314          
BLAST of mRNA_Ecto-sp13_S_contig5602.15933.1 vs. uniprot
Match: A0A7S1TYR4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYR4_9STRA)

HSP 1 Score: 213 bits (543), Expect = 7.670e-65
Identity = 104/153 (67.97%), Postives = 125/153 (81.70%), Query Frame = 0
Query:  167 LEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNAAHAEARPGQAQQ-WIYHDD 318
            L K  + GN  YRIQKEL+EF+ NPP  CKVSVG NIRVW +T++GAE T+Y GE+++LRV+FP  YPTKPP+VYFL+  PPPKH H+YTNGDICLSLL  +DW+PNLT  SLALSILSMLSSA+EKRLP DNA HA++ PG+ Q  W+YHDD
Sbjct:   91 LGKRVKRGNPLYRIQKELREFVDNPPPNCKVSVGDNIRVWTVTLTGAEDTLYEGEEYKLRVTFPTGYPTKPPSVYFLK--PPPKHPHVYTNGDICLSLLG-KDWRPNLTASSLALSILSMLSSAREKRLPNDNAQHADSPPGKPQDGWMYHDD 240          
BLAST of mRNA_Ecto-sp13_S_contig5602.15933.1 vs. uniprot
Match: A0A7S2R2N4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2N4_9STRA)

HSP 1 Score: 203 bits (516), Expect = 3.140e-61
Identity = 103/176 (58.52%), Postives = 128/176 (72.73%), Query Frame = 0
Query:  146 KNVATKKKSKGKAKGATTTSHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNAAHAEARPGQAQQ-WIYHDDLC 320
            K V  KKK  GK+  A    H+ K  +  N NYRIQ+ELKEF+ +PP   KV+VGKNIRVWIIT+ GA+ TIY G+KFRLRV FP +YPT PP+VYFLQ  P P+H+H+YTNGDICLSLL  +DW+P +T  S+A+SILS+LS A+ K LP DNA +   +PG  Q  W+YHDD C
Sbjct:   40 KPVVAKKKPAGKSAAAV---HIAKELKSNNPNYRIQRELKEFLKSPPPNLKVNVGKNIRVWIITLIGAKNTIYDGDKFRLRVQFPADYPTSPPSVYFLQ--PTPRHEHVYTNGDICLSLLG-KDWRPTMTAQSIAMSILSILSGAQRKSLPMDNARNCLNKPGAKQDDWVYHDDNC 209          
BLAST of mRNA_Ecto-sp13_S_contig5602.15933.1 vs. uniprot
Match: A0A7S4RNY0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RNY0_9STRA)

HSP 1 Score: 205 bits (521), Expect = 3.540e-60
Identity = 99/156 (63.46%), Postives = 121/156 (77.56%), Query Frame = 0
Query:  166 HLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNAAHAEARPGQAQQ-WIYHDDLC 320
            HL    +  + NYRIQKEL+ F+ +PP    V+VGKNIRVWI+TI+GA  TIY GEK+RLR+SFP  YPT PP+VYFL  PP PKH+H+YTNGDICLSLL  +DW+P +T  SLA+SILS+LSSA+EK LP DNAAH++ +PG  Q  WIYHDD C
Sbjct:  196 HLSAKLKSNSPNYRIQKELRAFLTSPPPNLSVAVGKNIRVWIVTITGASNTIYEGEKYRLRMSFPSNYPTSPPSVYFL--PPTPKHEHVYTNGDICLSLLG-KDWRPTMTGQSLAVSILSLLSSAREKSLPMDNAAHSQNKPGGNQDNWIYHDDNC 348          
BLAST of mRNA_Ecto-sp13_S_contig5602.15933.1 vs. uniprot
Match: A0A7S4A863_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A863_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.200e-59
Identity = 118/253 (46.64%), Postives = 160/253 (63.24%), Query Frame = 0
Query:   69 ALETFALVVRGGSDEDPSLTTLFMRVLMPGFRRDKGGDGELDLKGGGLMRRLKRLVSGVFRKVRGLPVASTEPKGEGKNVATKKKSKGKAKGATTTSHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNAAHAEARPGQAQQ-WIYHDDLC 320
            A+ T AL V GG++   SL       L+ G     GG G L  +  G++R+  R+   +    +      T P  + K VA KKK +  A+ +      +          RI +EL +F+ NPPD CKVSVGKN+ VWI+T++GAEGTI+AGEK++LRVSFP +YPT PP+ YFL+  P P+H H+YTNGDICL+LL +  W+P +TV  L+LSILSMLSSAK K +P+DNA HA + PG+ Q+ W+YHDD C
Sbjct:   86 AMHTRALRVSGGANAT-SLAPEAKAGLLDG-----GGGGSLATRLFGVIRKTVRMTLRLLGFGKDGGDEDTAPATK-KKVAAKKKRRSPARASPAQRQAQ----------RISRELTDFVENPPDGCKVSVGKNLNVWIVTMTGAEGTIFAGEKYKLRVSFPADYPTSPPSCYFLE--PTPRHPHVYTNGDICLNLLGN-GWRPTITVAQLSLSILSMLSSAKTKGIPQDNAVHAASAPGKPQEGWMYHDDSC 318          
BLAST of mRNA_Ecto-sp13_S_contig5602.15933.1 vs. uniprot
Match: A0A6U3E3N1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3E3N1_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.720e-59
Identity = 95/165 (57.58%), Postives = 126/165 (76.36%), Query Frame = 0
Query:  157 KAKGATTTSHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNAAHAEARPGQAQQ-WIYHDDLC 320
            K+K      H++K  +  + NYRIQ+ELK F+++PP   KV VGKNIRVWI+T+SGA+ TIY GE F+LR++FP  YPT PP+VYFL  P  P H+H+YTNGDICLSLL  +DW+P +T  S+A+SILS+LSSA+ K LP DNA H++ +PG+ Q+ W+YHDDLC
Sbjct:   42 KSKSTLANLHVKKELKATSPNYRIQRELKSFLSDPPPNLKVKVGKNIRVWIVTMSGAKDTIYEGETFQLRIAFPAAYPTVPPSVYFLP-PNIPLHEHVYTNGDICLSLLG-KDWRPTMTAQSIAVSILSILSSAQSKSLPMDNARHSQNKPGEYQKDWVYHDDLC 204          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5602.15933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQY7_ECTSI2.310e-21896.84Ubiquitin-conjugating enzyme n=1 Tax=Ectocarpus si... [more]
A0A835ZFF1_9STRA5.600e-8254.90Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A0G4GVI6_9ALVE2.050e-6863.53UBC core domain-containing protein n=1 Tax=Chromer... [more]
A0A0G4GQN8_VITBC6.630e-6864.74UBC core domain-containing protein n=1 Tax=Vitrell... [more]
W7U274_9STRA4.320e-6546.03Ubiquitin-conjugating enzyme n=2 Tax=Monodopsidace... [more]
A0A7S1TYR4_9STRA7.670e-6567.97Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2R2N4_9STRA3.140e-6158.52Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S4RNY0_9STRA3.540e-6063.46Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4A863_9STRA1.200e-5946.64Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A6U3E3N1_9STRA1.720e-5957.58Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 178..319
e-value: 4.0E-27
score: 106.1
NoneNo IPR availablePANTHERPTHR24068:SF148coord: 147..312
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 147..312
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..320
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.751
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 175..320
e-value: 2.6E-42
score: 146.0
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 165..295
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 179..302
e-value: 5.0E-29
score: 100.7
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 178..305
score: 25.251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5602contigEcto-sp13_S_contig5602:543..5009 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5602.15933.1mRNA_Ecto-sp13_S_contig5602.15933.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5602 227..5582 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5602.15933.1 ID=prot_Ecto-sp13_S_contig5602.15933.1|Name=mRNA_Ecto-sp13_S_contig5602.15933.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=321bp
MVGVPATLAFLCLVVHSSTSAAASTCRGGAPSRAFLAHGRRSSALTSSHA
RSCNPGPTTQEESGHGEDALETFALVVRGGSDEDPSLTTLFMRVLMPGFR
RDKGGDGELDLKGGGLMRRLKRLVSGVFRKVRGLPVASTEPKGEGKNVAT
KKKSKGKAKGATTTSHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVG
KNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPK
HQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNA
AHAEARPGQAQQWIYHDDLC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2