prot_Ecto-sp13_S_contig560.15926.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig560.15926.1
Unique Nameprot_Ecto-sp13_S_contig560.15926.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1079
Homology
BLAST of mRNA_Ecto-sp13_S_contig560.15926.1 vs. uniprot
Match: A0A6H5JTR0_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTR0_9PHAE)

HSP 1 Score: 1356 bits (3510), Expect = 0.000e+0
Identity = 886/1087 (81.51%), Postives = 916/1087 (84.27%), Query Frame = 0
Query:    1 MSSSDASDLVDSDHVEVSSPPTKSSRSRFLERSAGASSSGSRKKPRPKGDNITRPKKRSRLERCGDSSSGVESQGGKGKGKAASRSKATSAAPCAPARSRRGIQKDEVQEGERSSSSWHGSGSEDSXXXXXXXXXXGLRGQWVDGRKDTRKTSRVAASRRRATAKSGGRLDSKRLGARTEASTHRQRPPNSKAPPSRRKSAVGKGPKHADSDSSYACCDDAENSEEEDQEFELEEDMPAVGARGLATRRGGNAARRRTRSASRSIGDTADGTATRSGARKRPIRESSAAGFPQLLESASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDEPVLCRCGARDWRDGTRWIRCDVRGCRTWEHLACAYPGQALEDSGGEEGREEKAHVCGGCQAKGSSTAAAGATRGGRRSLTRSGDDGPTAPSPAHSSTSLSPSVGENTPSGSQRSGGPGSLSVRRSQRVSRLEEMRVRLRKNVVGDEESXXXXXDDPSSPRVGVARSGGVGGDGIDHTEEDGESESDGFWAPEGQVEVSQEYRCRCGAVRGDDARGGAGDGGWVQCHSDACGLWEHAACCVHGCSARSRNATTRRHFCLDCDPKGKKHARWENKMRKKLKRELAAREAAATGRAAXXXXXXXGVATVTGTKKKEAEERFGAMVRGLWMAVVSGNAPLVEEGFREAEGSGVPVRRLVSASPPEAYPDVVSLLAGGRARDGGAGEGTAKDDDKVIEIEAPSASSPFPAGLSLLMVAAGYWKVMADEAAATLNISAGAAXXXXXXXXTVLSGTSCGAQVSNAVPCAEDTPEKAAGAADLGGSTGPLPGTPTLRLPVDEVADTVGS--------ASKTTVCKTATRAVDKTTTTRPGPVATRDARAALAQTPAAGSTKXXXXXXXXXXXXXXAASGANFPPLASDARLAVLRLVLERSRERAVLAVDADGKTALHHAAAVGGAGEVSLLLEGELGGGAALMVSHERLTPLHVAAAAGHAETCASILRALALGPRAAVLEASDAGTSDETALHLACLEGRSACVRVILDE 1079
            MSSSDASDLVDSD  EVS PPTKSSRSRFLERSAGASS GSRKKP  KG+N TRPKKRSRLERCG S+SGVES+GGKGKGKAA RSKA SAA CAPARSRRGI+KD+ QE  RSSSSWHGSGS+ SXXXXXXXXXX  +GQWVDGRKD RKT RVA S R ATAKSGGRLDS R GAR EASTHRQRP NSKAPP RRKSAVGK PK +DSDS YA C DAE+SEEE QE ELEEDMPA G RGLATR GGNAARRR RSASR+  DTADGT TRSGARKRPIR S+AAG PQ LESA  XXXXXXX                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDEPVLCRCGARDW DG+RWI CDV  CRTWEHLACAYP +A EDS GEE RE KAHVCGGCQAKGSSTAAAGATRGGRRSLTR GDDGPTAPSPAHSSTSLSPSVGENTPSGSQRSGG GS  VRRSQRVSRLE MRVRLRKNVVGDE  XXXXX  PSS RVGVARSG VGGDGIDHTEEDGESESDGFWAPEGQVE+SQEYRCRCGA RGDDARGGAGDGGWVQCHSDACGLWEH ACC HGCSA SRNATTRRHFCLDCDPKGKKHARWE+KMRKKLK ++AAREAAA GR  XXXXXXX      GT+K EAEERF AMVRGLWMAVVSGNAPLVEE FREAE S VPVRRLVSA PPEA PDVVSL AGG ARDGGAGEGTAKDDDKVIEIEAPSASSP P GLSLLMVAAGYWKV+ADEAAA L+ +AGAA        TVL  TSC A+VSN VPCAED PEKAAGA DLG ST  LPGTP L LPVD VA TVGS        ASK  VCKTATR VD+TT  RPGPVA  D R    QTP AGST XXXXXXXXXXXXXXAASGA+FP LASD RLAVLRLVLE SRERAVLAVD +G+TALHHAAAVGG GEVSLLLEGELG GAAL++SHE+LTPLHVAA AGH ETC SILRALA GPRAAVLEASDAGTSD TAL+LACLEGRSACVRVILDE
Sbjct:    1 MSSSDASDLVDSDDAEVSPPPTKSSRSRFLERSAGASS-GSRKKPSRKGNNDTRPKKRSRLERCGGSTSGVESRGGKGKGKAARRSKAASAASCAPARSRRGIRKDKFQEEGRSSSSWHGSGSDGSXXXXXXXXXXXRQGQWVDGRKDARKTPRVAGSGRSATAKSGGRLDSTRSGARMEASTHRQRPLNSKAPPPRRKSAVGKDPKCSDSDSLYAGCYDAEDSEEEGQELELEEDMPAAGTRGLATRTGGNAARRRARSASRTTSDTADGTTTRSGARKRPIRRSTAAGLPQPLESAGDXXXXXXXLLSGATVKPSRKHAGSVSGDSQVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDEPVLCRCGARDWLDGSRWILCDVPRCRTWEHLACAYPEEAPEDSRGEERREAKAHVCGGCQAKGSSTAAAGATRGGRRSLTRWGDDGPTAPSPAHSSTSLSPSVGENTPSGSQRSGGAGSPRVRRSQRVSRLEGMRVRLRKNVVGDEXXXXXXXXXPSSSRVGVARSGDVGGDGIDHTEEDGESESDGFWAPEGQVEISQEYRCRCGATRGDDARGGAGDGGWVQCHSDACGLWEHPACCDHGCSAPSRNATTRRHFCLDCDPKGKKHARWEDKMRKKLKPQVAAREAAAPGRXXXXXXXXXXXXXXXGTEKTEAEERFRAMVRGLWMAVVSGNAPLVEEAFREAERSDVPVRRLVSAGPPEACPDVVSLPAGGHARDGGAGEGTAKDDDKVIEIEAPSASSPLPGGLSLLMVAAGYWKVIADEAAAPLDTTAGAASAAAA---TVLPDTSCSAKVSNTVPCAEDRPEKAAGATDLGISTDALPGTPRLPLPVDGVAGTVGSGEHELVATASKAPVCKTATRQVDETTIARPGPVAMTDTRPVRTQTPTAGSTXXXXXXXXXXXXXXXAASGADFPQLASDTRLAVLRLVLEHSRERAVLAVDDEGRTALHHAAAVGGTGEVSLLLEGELGRGAALVMSHEQLTPLHVAAVAGHPETCVSILRALAPGPRAAVLEASDAGTSDGTALNLACLEGRSACVRVILDE 1083          
BLAST of mRNA_Ecto-sp13_S_contig560.15926.1 vs. uniprot
Match: D7FPN0_ECTSI (HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPN0_ECTSI)

HSP 1 Score: 1319 bits (3414), Expect = 0.000e+0
Identity = 867/1094 (79.25%), Postives = 895/1094 (81.81%), Query Frame = 0
Query:    1 MSSSDASDLVDSDHVEVSSPPTKSSRSRFLERSAGASSSGSRKKPRPKGDNITRPKKRSRLERCGDSSSGVESQGGKGKGKAASRSKATSAAPCAPARSRRGIQKDEVQEGERSSSSWHGSGSEDSXXXXXXXXXXGLRGQWVDGRKDTRKTSRVAASRRRATAKSGGRLDSKRLGARTEASTHRQRPPNS---KAPPSRRKSAVGKGPKHADSDSSYACCDDAENSEEEDQEFELEEDMPAVGARGLATRRGGNAARRRTRSASRSIGDTADGTATRSGARKRPIRESSAAGFPQLLESASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----SSDEPVLCRCGARDWRDGTRWIRCDVRGCRTWEHLACAYPGQALEDSGGEEGREEKAHVCGGCQAKGSSTAAAGATRGGRRSLTRSGDDGPTAPSPAHSSTSLSPSVGENTPSGSQRSGGPGSLSVRRSQRVSRLEEMRVRLRKNVVGDEESXXXXXDDPSSPRVGVARSGGVGGDGIDHTEEDGESESDGFWAPEGQVEVSQEYRCRCGAVRGDDARGGAGDGGWVQCHSDACGLWEHAACCVHGCSARSRNATTRRHFCLDCDPKGKKHARWENKMRKKLKRELAAREAAATGRAAXXXXXXXGVATVTGTKKKEAEERFGAMVRGLWMAVVSGNAPLVEEGFREAEGSGVPVRRLVSASPPEAYPDVVSLLAGGRARDGGAGEGTAKDDDKVIEIEAPSASSPFPAGLSLLMVAAGYWKVMADEAAATLNISAGAAXXXXXXXXTVLSGTSCGAQVSNAVPCAEDTPEKAAGAADLGGSTGPLPGTPTLRLPVDEVADTVGS--------ASKTTVCKTATRAVDKTTTTRPGPVATRDARAALAQTPAAGSTKXXXXXXXXXXXXXXAASGANFPPLASDARLAVLRLVLERSRERAVLAVDADGKTALHHAAAVGGAGEVSLLLEGELGGGAALMVSHERLTPLHVAAAAGHAETCASILRALALGPRAAVLEASDAGTSDETALHLACLEGRSACVRVILDE 1079
            MSSSDASDLVDSD  EVSSPPTKSSRSRFLERSAG                                           KGKAASR KA SAAPCAPAR+RRGI+KD +QE                XXXXXXXXXX  RGQ  DGRKDTRK  RVAASRRRATAKSGGRLDS R GARTEASTHRQRPPNS   KAP  RRKSAVGKGPK ADSDS YA CDDAE+SEEEDQEF LEEDMPA G+RGLAT RGGNAARRRTR+ SR+ GDTA GTATRSGARKRPIR S+AAGFPQLLESAS XXXXXXXX                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     SSDEPVLCRCGARDWRDGTRWIRCDV GCRTWEHLACAYPG+ALED GGEEGREEKAHVCGGCQAKGSSTAAAGATRGGRRSLTR GDDGP+APSPAHSSTSLSP VG+NTPSGSQRS G GS SVRRSQRVSRLE MRVRLRKNVVGDEES     DDPSSPRVGV R GGV GD IDHTEEDGESESDGFWAPEGQVE+SQEYRCRCGA RGDD RGGAGDG WVQCHSDACGLWEHAACC HGCSA SRNATTRRHFCLDCDPKGKKHARWE+KMRKKLKRELAAR+AAA     XXXXXXX  ATVTGTKK EAE+RFGAMVRGLWMAVVSGNAPLVE+ FREAEGS VPVRRLVSA PPEA P+VVSLLAGGRARDGGAG+G AKDDDK IEIEAPSAS P PAGLSLLMVAAGYWKV+ADE AATL++SAGAA        TVL  TSC A+VSN +PCAED PEKAAGAADLGGS  PLPGTPTL LPVD VA TV S        AS   +CKTATR VD+TTT RPG VAT DARA  AQTP A STKXXXXXXXXXXXXXX ASGA+FP LASDARLAVLRLVLERSRERAVL VDA+G+TALHHAAAVGGAGEVSLLLEGELG GAALMVSHERLTPLHVAAAAGH ETC SILRALA GPRAAVLEASDAGTSDETALHLACLEGRSACVRVILDE
Sbjct:    1 MSSSDASDLVDSDDAEVSSPPTKSSRSRFLERSAG-------------------------------------------KGKAASRPKAASAAPCAPARNRRGIRKDYLQEXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGQLADGRKDTRKNPRVAASRRRATAKSGGRLDSTRSGARTEASTHRQRPPNSSSVKAPXPRRKSAVGKGPKRADSDSPYAGCDDAEDSEEEDQEFMLEEDMPAAGSRGLATLRGGNAARRRTRAISRTTGDTAHGTATRSGARKRPIRTSTAAGFPQLLESASDXXXXXXXXLSVATVKPPIKHAGSVSGDSQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVSSNSSDEPVLCRCGARDWRDGTRWIRCDVPGCRTWEHLACAYPGEALEDRGGEEGREEKAHVCGGCQAKGSSTAAAGATRGGRRSLTRWGDDGPSAPSPAHSSTSLSPPVGQNTPSGSQRSPGAGSPSVRRSQRVSRLEGMRVRLRKNVVGDEESCSSSNDDPSSPRVGVVRIGGVDGDSIDHTEEDGESESDGFWAPEGQVEISQEYRCRCGATRGDDPRGGAGDGDWVQCHSDACGLWEHAACCDHGCSAPSRNATTRRHFCLDCDPKGKKHARWEDKMRKKLKRELAARQAAAXXXXXXXXXXXXXXATVTGTKKTEAEKRFGAMVRGLWMAVVSGNAPLVEKAFREAEGSDVPVRRLVSAGPPEACPNVVSLLAGGRARDGGAGKGAAKDDDKAIEIEAPSASYPLPAGLSLLMVAAGYWKVIADETAATLDMSAGAASAAAA---TVLPDTSCSAKVSNTLPCAEDRPEKAAGAADLGGSIDPLPGTPTLPLPVDGVAGTVRSGEQELVATASNAPICKTATRPVDETTTARPGLVATTDARAEPAQTPTARSTKXXXXXXXXXXXXXXXASGADFPQLASDARLAVLRLVLERSRERAVLGVDAEGRTALHHAAAVGGAGEVSLLLEGELGRGAALMVSHERLTPLHVAAAAGHPETCVSILRALAPGPRAAVLEASDAGTSDETALHLACLEGRSACVRVILDE 1048          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig560.15926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTR0_9PHAE0.000e+081.51HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FPN0_ECTSI0.000e+079.25HECT domain and ankyrin repeat containing, E3 ubiq... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 373..449
e-value: 1.4E-6
score: 29.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 947..1079
e-value: 1.1E-14
score: 56.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 973..1077
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 1011..1078
e-value: 3.4E-6
score: 27.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 979..1079
score: 15.512
NoneNo IPR availablePANTHERPTHR24184:SF11coord: 922..1078
NoneNo IPR availablePANTHERPTHR24184FAMILY NOT NAMEDcoord: 922..1078
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 375..444

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig560contigEcto-sp13_S_contig560:118..4567 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig560.15926.1mRNA_Ecto-sp13_S_contig560.15926.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig560 118..4567 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig560.15926.1 ID=prot_Ecto-sp13_S_contig560.15926.1|Name=mRNA_Ecto-sp13_S_contig560.15926.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1079bp
MSSSDASDLVDSDHVEVSSPPTKSSRSRFLERSAGASSSGSRKKPRPKGD
NITRPKKRSRLERCGDSSSGVESQGGKGKGKAASRSKATSAAPCAPARSR
RGIQKDEVQEGERSSSSWHGSGSEDSGGSSDEGGGGGLRGQWVDGRKDTR
KTSRVAASRRRATAKSGGRLDSKRLGARTEASTHRQRPPNSKAPPSRRKS
AVGKGPKHADSDSSYACCDDAENSEEEDQEFELEEDMPAVGARGLATRRG
GNAARRRTRSASRSIGDTADGTATRSGARKRPIRESSAAGFPQLLESASD
DDDDDQSLLSGATVKPPRQHAGSVSGDSQAGGGDGATSTLTPFALSDDDD
DCLRNTDSDDDGTAGGSGGGGGGDDVSSNSSDEPVLCRCGARDWRDGTRW
IRCDVRGCRTWEHLACAYPGQALEDSGGEEGREEKAHVCGGCQAKGSSTA
AAGATRGGRRSLTRSGDDGPTAPSPAHSSTSLSPSVGENTPSGSQRSGGP
GSLSVRRSQRVSRLEEMRVRLRKNVVGDEESSSSSNDDPSSPRVGVARSG
GVGGDGIDHTEEDGESESDGFWAPEGQVEVSQEYRCRCGAVRGDDARGGA
GDGGWVQCHSDACGLWEHAACCVHGCSARSRNATTRRHFCLDCDPKGKKH
ARWENKMRKKLKRELAAREAAATGRAATATATASGVATVTGTKKKEAEER
FGAMVRGLWMAVVSGNAPLVEEGFREAEGSGVPVRRLVSASPPEAYPDVV
SLLAGGRARDGGAGEGTAKDDDKVIEIEAPSASSPFPAGLSLLMVAAGYW
KVMADEAAATLNISAGAAGAAGAAVATVLSGTSCGAQVSNAVPCAEDTPE
KAAGAADLGGSTGPLPGTPTLRLPVDEVADTVGSASKTTVCKTATRAVDK
TTTTRPGPVATRDARAALAQTPAAGSTKTAAAAATAVATCTAAASGANFP
PLASDARLAVLRLVLERSRERAVLAVDADGKTALHHAAAVGGAGEVSLLL
EGELGGGAALMVSHERLTPLHVAAAAGHAETCASILRALALGPRAAVLEA
SDAGTSDETALHLACLEGRSACVRVILDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR011011Znf_FYVE_PHD