prot_Ecto-sp13_S_contig56.15925.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig56.15925.1
Unique Name	prot_Ecto-sp13_S_contig56.15925.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	444

Homology

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BLAST of mRNA_Ecto-sp13_S_contig56.15925.1 vs. uniprot
Match: D8LU30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU30_ECTSI)

HSP 1 Score: 451 bits (1159), Expect = 1.610e-148
Identity = 308/383 (80.42%), Postives = 317/383 (82.77%), Query Frame = 0

Query:   67 PKEEKNQSPTLPPERHEDNSSVLDEGDTDANAAGRPRLDLAPSHSATGDEGAVFSPQEASADAGTGADAADVVPGPITTAGATAGTPEESAGCLPGGGVFGSWRRRRRGNRQRRFSDGALASTXXXXXXXXXXXXXXSGPDKMSSNNSGSKSWRSGSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----KVNKPAATALTLEEVEMLATSDWGGGYSNGSARDIWKELTHVGGXXXXXXXXXXXXXXXXXGMLGPAVRLRLRFIPLWDCLADGGGVNGLGALHAAARDGDARLVTSLAHLWQRLSPGSQVLSLPCRRGLTPIQHCIEAGKEDALRELLRGIARDSVRGGGPEGKDSPLHTAVKAGEEGMLKMLLAQSRR 444
            PKEEKNQSPTLPPERHEDNSSVLDEGD DA+AAGRPRLD+APSHSATGDEGA+ S QEASADAGTGADAAD VPGP +TAGAT GTPEESAGCLPGGGVFGSWRR                  XXXXXXXXXXXXXX                      XXXXXXXXXXXXXXXXXXXXXX            K NKPAATALTLEEVEMLAT+DWG GY+NGSARDIWKELTHVGGXXXXXXXXXXXXXXXX   LGPAVRLRLRFIPLWDCLADG G+NGLGALHAAARDGDARLV SLA LWQ+LSPGSQVLSLPCRRGLTPIQHCIEAGKE+ALRELLRGIARDSVRGGGPEGKDSPLHTAVKAGEEGMLKMLLAQSRR
Sbjct:   78 PKEEKNQSPTLPPERHEDNSSVLDEGDADADAAGRPRLDVAPSHSATGDEGAIISAQEASADAGTGADAADAVPGPSSTAGATTGTPEESAGCLPGGGVFGSWRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGKAVAAAAGKKANKPAATALTLEEVEMLATNDWGEGYANGSARDIWKELTHVGGXXXXXXXXXXXXXXXXGSRLGPAVRLRLRFIPLWDCLADGAGMNGLGALHAAARDGDARLVASLARLWQKLSPGSQVLSLPCRRGLTPIQHCIEAGKENALRELLRGIARDSVRGGGPEGKDSPLHTAVKAGEEGMLKMLLAQSRR 460

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BLAST of mRNA_Ecto-sp13_S_contig56.15925.1 vs. uniprot
Match: A0A6H5KTK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTK8_9PHAE)

HSP 1 Score: 325 bits (832), Expect = 3.550e-102
Identity = 247/298 (82.89%), Postives = 256/298 (85.91%), Query Frame = 0

Query:   67 PKEEKNQSPTLPPERHEDNSSVLDEGDTDANAAGRPRLDLAPSHSATGDEGAVFSPQEASADAGTGADAADVVPGPITTAGATAGTPEESAGCLPGGGVFGSWRRRRRGNRQRRFSDGALASTXXXXXXXXXXXXXXSGPDKMSSNNSGSKSWRSGSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---KVNKPAATALTLEEVEMLATSDWGGGYSNGSARDIWKELTHVGGXXXXXXXXXXXXXXXXXGM-LGPAVRLRLRFIPLWDCLADGGGVNGLGALHAAARDGDARLVT 360
            PKEEKNQSPTLPPER+EDNSSV DEGD DANAAGRPRLDLAPS SA G EGA+ SPQEASADAGTGADAAD VPGP +TA     TPEESAGCLPGGGVFGSWRRRRRG          LA  XXXXXXXXXXXXXX GP+KMS+N+SGSKS R     XXXXXXXXXXXXXXXXXXXXXXXXXXXXX   + NKPAATALTLEEVEMLATSDWGGGY+NGSARDIWKELTHVGGXXXXXXXXXXXXX    G  LGPAVRLRLRFIPLWDCLADGGGVNGLGALHAAARDGDARLV+
Sbjct:  278 PKEEKNQSPTLPPERYEDNSSVRDEGDADANAAGRPRLDLAPSDSAAGGEGAIISPQEASADAGTGADAADAVPGPSSTASXXXXTPEESAGCLPGGGVFGSWRRRRRGXXXXXXXXXGLAXXXXXXXXXXXXXXXXXGPEKMSNNSSGSKSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRANKPAATALTLEEVEMLATSDWGGGYANGSARDIWKELTHVGGXXXXXXXXXXXXXTGAGGSRLGPAVRLRLRFIPLWDCLADGGGVNGLGALHAAARDGDARLVS 575

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BLAST of mRNA_Ecto-sp13_S_contig56.15925.1 vs. uniprot
Match: A0A835YV06_9STRA (Ankyrin repeat-containing domain protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV06_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 7.340e-11
Identity = 53/148 (35.81%), Postives = 70/148 (47.30%), Query Frame = 0

Query:  318 LGPAVRLRLRFIPLWDCLA----------------------DGGGVNGLGALHAAARDGDARLVTSLAHLWQRLSPGSQVLSLPCRRGLTPIQHCIEAGKEDALRELLRGIARDSVRGGGPEGKDSPLHTAVKAGEEGMLKMLLAQSR 443
            + PAVRLRLRFIPL DC++                        G  N   A+H AA  GD RLV +L  +   ++PG +VLSL    GLT + H I  G    +R LL+      + G    G DSP H AV A E  +L  + A ++
Sbjct:   87 VAPAVRLRLRFIPLRDCVSAVQSDAPAHHAPIVIGPSLSQSQQGATN---AIHRAAMAGDVRLVMALVAMLDAVAPGGKVLSLRSGEGLTALDHLIRGGHVGPVRTLLKTYGHLCMEGV-ESGHDSPFHNAVTAAEPAVLPHIAATAK 230

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BLAST of mRNA_Ecto-sp13_S_contig56.15925.1 vs. uniprot
Match: A0A835ZIX4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIX4_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 9.480e-11
Identity = 53/148 (35.81%), Postives = 70/148 (47.30%), Query Frame = 0

Query:  318 LGPAVRLRLRFIPLWDCLA----------------------DGGGVNGLGALHAAARDGDARLVTSLAHLWQRLSPGSQVLSLPCRRGLTPIQHCIEAGKEDALRELLRGIARDSVRGGGPEGKDSPLHTAVKAGEEGMLKMLLAQSR 443
            + PAVRLRLRFIPL DC++                        G  N   A+H AA  GD RLV +L  +   ++PG +VLSL    GLT + H I  G    +R LL+      + G    G DSP H AV A E  +L  + A ++
Sbjct:  252 VAPAVRLRLRFIPLRDCVSAVQSDAPAHHAPIVIGPSLSQSQQGATN---AIHRAAMAGDVRLVMALVAMLDAVAPGGKVLSLRSGEGLTALDHLIRGGHVGPVRTLLKTYGHLCMEGV-ESGHDSPFHNAVTAAEPAVLPHIAATAK 395

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig56.15925.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig56.15925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D8LU30_ECTSI	1.610e-148	80.42	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KTK8_9PHAE	3.550e-102	82.89	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YV06_9STRA	7.340e-11	35.81	Ankyrin repeat-containing domain protein n=2 Tax=T...	[more]
A0A835ZIX4_9STRA	9.480e-11	35.81	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 347..440 e-value: 1.8E-6 score: 28.4
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 342..444 score: 13.469
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 334..444 e-value: 1.5E-8 score: 36.4
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 342..440

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig56	contig	Ecto-sp13_S_contig56:42796..46008 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig56.15925.1	mRNA_Ecto-sp13_S_contig56.15925.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig56 42796..46008 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig56.15925.1 ID=prot_Ecto-sp13_S_contig56.15925.1|Name=mRNA_Ecto-sp13_S_contig56.15925.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=444bp
MVAATAERVLNPATQAMVAAAAAAALVGRGGGSGASCRQERASSSSRLKG
TAATGGCPPQAAAVLFPKEEKNQSPTLPPERHEDNSSVLDEGDTDANAAG
RPRLDLAPSHSATGDEGAVFSPQEASADAGTGADAADVVPGPITTAGATA
GTPEESAGCLPGGGVFGSWRRRRRGNRQRRFSDGALASTGGSPGAGGGGV
GGGSGPDKMSSNNSGSKSWRSGSSAGLAGKNRSTKEGSGGVSSLAGKAAA
AAGKKVNKPAATALTLEEVEMLATSDWGGGYSNGSARDIWKELTHVGGGG
GSGNGGKSKGTGAGGGMLGPAVRLRLRFIPLWDCLADGGGVNGLGALHAA
ARDGDARLVTSLAHLWQRLSPGSQVLSLPCRRGLTPIQHCIEAGKEDALR
ELLRGIARDSVRGGGPEGKDSPLHTAVKAGEEGMLKMLLAQSRR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020683	Ankyrin_rpt-contain_dom
IPR036770	Ankyrin_rpt-contain_sf