prot_Ecto-sp13_S_contig56.15924.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig56.15924.1
Unique Nameprot_Ecto-sp13_S_contig56.15924.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length83
Homology
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BLAST of mRNA_Ecto-sp13_S_contig56.15924.1 vs. uniprot
Match: A0A6H5KTK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTK8_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 3.250e-42
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 
Query:    1 MSEVVKAGVLEVTVVQATGVDLLAATSTLSRTARRKPALVARVTVDGTTKSGQPAQRSHHPVWFPAQPLNLGDMNASSSTSRA 83
            MSEVVKAGVLEVTVVQATGVDLLAATSTLSRTARRKPALVARVTVDGTTKSGQPAQRSHHPVWFPAQPLNLGDMNASSSTSRA
Sbjct:    1 MSEVVKAGVLEVTVVQATGVDLLAATSTLSRTARRKPALVARVTVDGTTKSGQPAQRSHHPVWFPAQPLNLGDMNASSSTSRA 83
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BLAST of mRNA_Ecto-sp13_S_contig56.15924.1 vs. uniprot
Match: D8LU30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU30_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 3.270e-6
Identity = 31/32 (96.88%), Postives = 31/32 (96.88%), Query Frame = 0 
Query:    1 MSEVVKAGVLEVTVVQATGVDLLAATSTLSRT 32
            MSEVVKAGVLEVTVVQATGVDLL ATSTLSRT
Sbjct:    1 MSEVVKAGVLEVTVVQATGVDLLVATSTLSRT 32
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig56.15924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTK8_9PHAE3.250e-42100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU30_ECTSI3.270e-696.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig56contigEcto-sp13_S_contig56:41991..42599 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig56.15924.1mRNA_Ecto-sp13_S_contig56.15924.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig56 39707..42599 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig56.15924.1 ID=prot_Ecto-sp13_S_contig56.15924.1|Name=mRNA_Ecto-sp13_S_contig56.15924.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=83bp
MSEVVKAGVLEVTVVQATGVDLLAATSTLSRTARRKPALVARVTVDGTTK
SGQPAQRSHHPVWFPAQPLNLGDMNASSSTSRA
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