prot_Ecto-sp13_S_contig56.15921.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig56.15921.1
Unique Name	prot_Ecto-sp13_S_contig56.15921.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	1586

Homology

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BLAST of mRNA_Ecto-sp13_S_contig56.15921.1 vs. uniprot
Match: D7G540_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G540_ECTSI)

HSP 1 Score: 415 bits (1066), Expect = 1.370e-128
Identity = 294/535 (54.95%), Postives = 300/535 (56.07%), Query Frame = 0

Query:   49 MEAVTPLTVSLDGVLLFIGDTNIFPMLSFENILATAAKEIEHMASTVAEDASKSTGESQPGTKQDELSTKTTAGLDADGFVRVCIHLLRDNFLVKEMGFQHRVEALTVEQRDKEWAQRLPGATEHCDLLARLKGWMEHYRLPSRMSLFKKETFAIGCPTETRSRKATSTGGTRRVRTRPAGLVPRASPCLIDLWTGKIVARNALEVSPLSPSGKAIKVDDSADRAILNQIADMVIDLAAPVPQSTTASPAAPGDVSVGGGGTTLLQPGADPTLPLGREDVPEATPVGKSDSIPGKLTPPARAVCDNSDDGAHGSDTDDFSSPGISPKETDDKPREGTTADLASGDNRSECSEKTVSGGKVEDISDTSPSLVKNQNTPAIERGKTAEQADWKGQVTAREIAKKAKAQQLRVSNTVVRILGQIHPDNVPTTSRPPTQRLDV-GASAEDRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTPDDFTTLASDHPSQQLLKAGKELMRQKRPEQAVVVWGQAAEILRNTIE 582
            MEAVTPLTVSLDGVLLFIGDTNIFPML FENILATAAKEIEHMAST AEDASK+TGE+ PG  QDELST+TTAGLDADGFVRVCIHLLRDNFLVKEMGFQHRVEALTVEQRDKEWAQRLPG T                                                                                              VDDSADRAILNQIADMV+DLAA VPQSTTASPAAPGDVSVGGGGTTL QPGAD TL LG E                                                                                                       GK AEQADWKGQVTARE+AKKAKAQQLR+SNTVVRILGQIHPDNVP  SRPPTQR D  GASAEDRV                 XXXXXXXXXXXXXXXX    VTPDDFTTLASDHPSQQLLKAGKELMRQKRPEQAVVVWGQAAEILRNTIE
Sbjct:    1 MEAVTPLTVSLDGVLLFIGDTNIFPMLGFENILATAAKEIEHMASTEAEDASKNTGENLPGINQDELSTRTTAGLDADGFVRVCIHLLRDNFLVKEMGFQHRVEALTVEQRDKEWAQRLPGTT----------------------------------------------------------------------------------------------VDDSADRAILNQIADMVVDLAALVPQSTTASPAAPGDVSVGGGGTTLPQPGADQTLLLGGE-------------------------------------------------------------------------------------------------------GKKAEQADWKGQVTAREVAKKAKAQQLRISNTVVRILGQIHPDNVP--SRPPTQRPDTSGASAEDRVEVDGTKEDENEVASSSSXXXXXXXXXXXXXXXXPAPTVTPDDFTTLASDHPSQQLLKAGKELMRQKRPEQAVVVWGQAAEILRNTIE 336

[Close]

BLAST of mRNA_Ecto-sp13_S_contig56.15921.1 vs. uniprot
Match: D7G539_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G539_ECTSI)

HSP 1 Score: 398 bits (1022), Expect = 1.900e-124
Identity = 234/243 (96.30%), Postives = 239/243 (98.35%), Query Frame = 0

Query: 1270 MMKGSLLWRESGVGRVAELTAEGVLHGVGETCRPVTEHLRRQLAIAMACESTEESSPPKSPRKQVIARDALMGLGTMATLCGDDRGARDLYERAVQCCRASGDWIGLAHALTAKARLQAAAGRFEEAVGGFKLVLKLACELRDDALAASAHSCLGWAMASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAHMHVRLAIVLNGNGDQAVCHDTPQTNPNPALELSSHAELVGARRHYSR 1512
            MMKGSLLWRESGVGRV ELTAEGVLHG+GETCRPVTE+LRRQLAIAMACESTEESSPPKSPRKQVIARDALMGLGTMATLCGDDRGARDLYERAVQCCRASGDWIGLAHAL AKA LQAAAGRFEEAVGGFKLVLKLACELRDDALAASAHSCLGWAMASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IAHMHVRLAIVL+G+GDQAVCHDTPQT+PNPALELSSHAELVGARRHYSR
Sbjct:    1 MMKGSLLWRESGVGRVTELTAEGVLHGMGETCRPVTEYLRRQLAIAMACESTEESSPPKSPRKQVIARDALMGLGTMATLCGDDRGARDLYERAVQCCRASGDWIGLAHALAAKAHLQAAAGRFEEAVGGFKLVLKLACELRDDALAASAHSCLGWAMASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIAHMHVRLAIVLSGDGDQAVCHDTPQTDPNPALELSSHAELVGARRHYSR 243

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig56.15921.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig56.15921.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G540_ECTSI	1.370e-128	54.95	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G539_ECTSI	1.900e-124	96.30	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 652..672
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 1377..1410 e-value: 160.0 score: 4.4 coord: 639..672 e-value: 230.0 score: 3.0 coord: 1337..1370 e-value: 120.0 score: 5.4 coord: 547..580 e-value: 67.0 score: 7.7 coord: 916..949 e-value: 4.0 score: 16.4
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 639..672 score: 6.166
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 916..949 score: 9.352
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 1377..1410 score: 5.281
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 1309..1482 e-value: 5.5E-14 score: 54.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 549..949
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 1356..1542
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 916..949 score: 9.732

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig56	contig	Ecto-sp13_S_contig56:3180..17180 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig56.15921.1	mRNA_Ecto-sp13_S_contig56.15921.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig56 2992..31069 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig56.15921.1 ID=prot_Ecto-sp13_S_contig56.15921.1|Name=mRNA_Ecto-sp13_S_contig56.15921.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1586bp
MPPHGSPYSSSASPRSRLSGRVSSTSIQPDAQGKSLSAVRSPVLSTPAME
AVTPLTVSLDGVLLFIGDTNIFPMLSFENILATAAKEIEHMASTVAEDAS
KSTGESQPGTKQDELSTKTTAGLDADGFVRVCIHLLRDNFLVKEMGFQHR
VEALTVEQRDKEWAQRLPGATEHCDLLARLKGWMEHYRLPSRMSLFKKET
FAIGCPTETRSRKATSTGGTRRVRTRPAGLVPRASPCLIDLWTGKIVARN
ALEVSPLSPSGKAIKVDDSADRAILNQIADMVIDLAAPVPQSTTASPAAP
GDVSVGGGGTTLLQPGADPTLPLGREDVPEATPVGKSDSIPGKLTPPARA
VCDNSDDGAHGSDTDDFSSPGISPKETDDKPREGTTADLASGDNRSECSE
KTVSGGKVEDISDTSPSLVKNQNTPAIERGKTAEQADWKGQVTAREIAKK
AKAQQLRVSNTVVRILGQIHPDNVPTTSRPPTQRLDVGASAEDRVEVNDT
KEDENEVASSSSSDTSSNTASTDRPSSHSAPTVTPDDFTTLASDHPSQQL
LKAGKELMRQKRPEQAVVVWGQAAEILRNTIEVDPRQSLVVLLQLSSGFQ
KLGRFQDVPPILHEAEQTARVIASWQENNRILRNRRLGATVVGKLGWALI
YVKDFERALEAFERMSKRLRGEHDDPIAMKAGDSRIFRAKKKTKVQESKE
EPTTREDLLLLWEARRGSSTALVGLRRGKEALTKAAEATELADQIAEPAM
QAECAGLCGRAWQSVEAKKRIEVGYRKASTAFDALYGHQEDDNNEQEKDT
DGEECSSDGEPHDNPPIVVSSGLQGRRKREITSATGAERDLNDAKASARE
AAGCFRRQVALLKSLNRYSTPLPHLEAELDFNIGDDGLPIFPTKTPDIKN
CKEKQRIEQNAHVAALQALLELGKTALSLGEVDSAVEVFKRRLKLAESRC
EWPSRPSGQDDESVGVQVGVGLPIPSHPGKHRVPLPPEVSFQCSSTDVRR
RPMGACSQRKNAPGAATPPTEAMPPSEPCVNGGSSKYCDLKTKEGSALDV
AEALWWLAISTCQQHLGVYLTSSPRFLPFNARPRLPPTSSRCGIGTSAGS
ERLPEATPRHKGVTPSKTRMMAPSRSESPRKNNKGIPINVRPRSTFLSGG
GTTDSVIDQDRVGFTPTLPPTPCRVRTPSRQPTAYSGAYRKHGKYNLPRS
ARRRRPSPPNTARSSPRWDTGEANGGHEALATPCLRQDLDCSGDGVREPG
DTGVAALVRNFHAEEATDEMMKGSLLWRESGVGRVAELTAEGVLHGVGET
CRPVTEHLRRQLAIAMACESTEESSPPKSPRKQVIARDALMGLGTMATLC
GDDRGARDLYERAVQCCRASGDWIGLAHALTAKARLQAAAGRFEEAVGGF
KLVLKLACELRDDALAASAHSCLGWAMASRGGVKEALGHFRQWRKISCRS
LESSSAAASELCIAHMHVRLAIVLNGNGDQAVCHDTPQTNPNPALELSSH
AELVGARRHYSRYLRWAERVDDACGVSHAHTCLARMYQIMEDDESSAFHR
HASLEGHHWRGNIDIHGKMRAKEHEGVVRDMLQLN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom