prot_Ecto-sp13_S_contig5598.15916.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5598.15916.1
Unique Nameprot_Ecto-sp13_S_contig5598.15916.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length89
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5598.15916.1 vs. uniprot
Match: D8LLQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ4_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 4.950e-32
Identity = 62/81 (76.54%), Postives = 64/81 (79.01%), Query Frame = 0 
Query:    1 MATARGGGSADGERSYTFAALVLFLFTEPVRPKTKNIAKFLQNIAELLLENVWEGLPAESVTHTNVRMAAIYSRHDSRWMD 81
            MATARGGGS   +R    AALVLFLFTEPVRPKTKNIA       ELLLE+ WEGLP ES THTNVRMAAIYSRHDSRWMD
Sbjct:   85 MATARGGGSRSYQRGIRLAALVLFLFTEPVRPKTKNIA-------ELLLEDFWEGLPVESGTHTNVRMAAIYSRHDSRWMD 158
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BLAST of mRNA_Ecto-sp13_S_contig5598.15916.1 vs. uniprot
Match: D8LLQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ6_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 6.010e-29
Identity = 55/66 (83.33%), Postives = 56/66 (84.85%), Query Frame = 0 
Query:   16 YTFAALVLFLFTEPVRPKTKNIAKFLQNIAELLLENVWEGLPAESVTHTNVRMAAIYSRHDSRWMD 81
            YTFAALVLFLFTEPVRPKTKNIA       ELLLE+ WEGLP ES THTNVRMAAIYSRHDSRWMD
Sbjct:   55 YTFAALVLFLFTEPVRPKTKNIA-------ELLLEDFWEGLPVESGTHTNVRMAAIYSRHDSRWMD 113
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BLAST of mRNA_Ecto-sp13_S_contig5598.15916.1 vs. uniprot
Match: A0A6H5L705_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L705_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 3.570e-25
Identity = 53/66 (80.30%), Postives = 56/66 (84.85%), Query Frame = 0 
Query:   16 YTFAALVLFLFTEPVRPKTKNIAKFLQNIAELLLENVWEGLPAESVTHTNVRMAAIYSRHDSRWMD 81
            YTFAALVLFLFTEP+RP+TKNIA       ELLLE+ WEGLP ES THTNVRMAAIYSRHDSRWMD
Sbjct:  478 YTFAALVLFLFTEPIRPETKNIA-------ELLLEDFWEGLPVESGTHTNVRMAAIYSRHDSRWMD 536
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5598.15916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LLQ4_ECTSI4.950e-3276.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LLQ6_ECTSI6.010e-2983.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L705_9PHAE3.570e-2580.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5598contigEcto-sp13_S_contig5598:366..2683 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5598.15916.1mRNA_Ecto-sp13_S_contig5598.15916.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5598 366..6249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5598.15916.1 ID=prot_Ecto-sp13_S_contig5598.15916.1|Name=mRNA_Ecto-sp13_S_contig5598.15916.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=89bp
MATARGGGSADGERSYTFAALVLFLFTEPVRPKTKNIAKFLQNIAELLLE
NVWEGLPAESVTHTNVRMAAIYSRHDSRWMDYSVRPVV*
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