prot_Ecto-sp13_S_contig5593.15909.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig5593.15909.1
Unique Name	prot_Ecto-sp13_S_contig5593.15909.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	510

Homology

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BLAST of mRNA_Ecto-sp13_S_contig5593.15909.1 vs. uniprot
Match: D7FW10_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW10_ECTSI)

HSP 1 Score: 704 bits (1817), Expect = 4.940e-251
Identity = 427/509 (83.89%), Postives = 443/509 (87.03%), Query Frame = 0

Query:    1 MTASRGVMGSATFLVAVSGLLDPPLVPPNGLSPFHRSAPAPPPILFRSNTRRGSFCAGLLASTARRRKRCLQAGNESPGTGDEGVNAAAGGRRHGSGHGIFDANAWKNMPSSPPPVTAPTTSLYPSAVQLSSNDALDGEREEMHEEPINVDVEKLPTFVFFVRVNGRHRREEVVGGRDARTCAAELRKRLASVSLPGSSWTNSVSLVDNDSPLRPSGAGEGGVGGGVARTSSDGAALVGEAAEGPDRLDDETDTGMGRGSGGMGANVDVTGSPTTIVEISDKRDLLRVLGAKGEGQGPVVVMYHAPWCRKCAYLTPVFRRLAAAQATSVGGREADGSSSDMGPSERPLFCRVDVSHPSWGKRRAVRGASVAPPTVASEGSAAAAAADTAVTGRAQNKAAIAAGASSQVRGLGVGDRAAGLVAADXXXXXXEAEGTIAEMELLHAGSQAVENCDVCGGSGFVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKCYMCD 509
            MTASRGV+GSATFLVAVSGLLDPPLVPPNGLSP   SAP PPP LF+S+T RG +CAG LASTARRRKRCLQAGNESPGTG EGVNAAAGGRRHGSGH +FDA+AWKNMPSSPPPVTAP TSL PSAVQLSSNDALDGE EE  EEP NVDVEKLPTFVFFVR  GRHRREEV+GGRDARTCA EL +RLAS+S PGS+WTNS SL DNDSPLRPSGAGEGGVGGG ARTSSDGAA+VG AAEGPDRLD ETDTGMGRGSG M ANVD TG+PT IVEISDKRDLLRVLGA GEGQGPVVVMYHAPWCRKCAYLTPVFRRLAAAQA S G RE  GSS + G SE PLFCRVDVSHPSWG+RRAVRGASVAP TVAS G+AA             N AAIAAGASSQ +GLG GDRAAG VAAD      EAEGTIAE ELLHAGSQAVENCDVCGGSGFVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKCYMCD
Sbjct:    1 MTASRGVLGSATFLVAVSGLLDPPLVPPNGLSPLRPSAPNPPPSLFQSDTHRGYYCAGPLASTARRRKRCLQAGNESPGTGGEGVNAAAGGRRHGSGHSMFDADAWKNMPSSPPPVTAPPTSLNPSAVQLSSNDALDGEGEEEREEPTNVDVEKLPTFVFFVRDKGRHRREEVIGGRDARTCATELSERLASISSPGSTWTNSGSLDDNDSPLRPSGAGEGGVGGGAARTSSDGAAVVGGAAEGPDRLDYETDTGMGRGSGDMVANVDGTGNPTNIVEISDKRDLLRVLGALGEGQGPVVVMYHAPWCRKCAYLTPVFRRLAAAQAPSAGVREGGGSSIERGSSEGPLFCRVDVSHPSWGRRRAVRGASVAPSTVASAGTAAXXXXXXXXXXXXPNTAAIAAGASSQAQGLGFGDRAAGWVAADATTATAEAEGTIAETELLHAGSQAVENCDVCGGSGFVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKCYMCD 509

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BLAST of mRNA_Ecto-sp13_S_contig5593.15909.1 vs. uniprot
Match: A0A6H5JLH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH3_9PHAE)

HSP 1 Score: 687 bits (1773), Expect = 3.480e-244
Identity = 386/519 (74.37%), Postives = 410/519 (79.00%), Query Frame = 0

Query:    1 MTASRGVMGSATFLVAVSGLLDPPLVPPNGLSPFHRSAPAPPPILFRSNTRRGSFCAGLLASTARRRKRCLQAGNESPGTGDEGVNAAAGGRRHGSGHGIFDANAWKNMPSSPPPVTAPTTSLYPSAVQLSSNDALDGERE-EMHEEPINVDVEKLPTFVFFVRVNGRHRREEVVGGRDARTCAAELRKRLASVSLPGSSWTNSVSLVDNDSPLRPSGAGEGGVGGGVARTSSDGAALVGEAAEGPDRLDDETDTGMGRGSGGMGANVDVTGSPTTIVEISDKRDLLRVLGAKGEGQGPVVVMYHAPWCRKCAYLTPVFRRLAAAQATSVGGREADGSSSDMGPSERPLFCRVDVSHPSWGKRRAVRGASVAPPTVASEGSAAAAAADTAVTG---------RAQNKAAIAAGASSQVRGLGVGDRAAGLVAADXXXXXXEAEGTIAEMELLHAGSQAVENCDVCGGSGFVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKCYMCD 509
            MTAS GV+GSATFLVAVSGLLDPPLVPP GLSPFH SAPAPPP LFRS+ RRGSFC G LASTAR RKRCLQAGNESPGTGDEGVNAAA GRRHGSGHG+FDA+AWKNMPSSPP VTAP TSL PSAVQLS+N ALD E   E  EEPI+V V+KLPTFVFFVR NGRHRREEV GGRDARTCA +LR+RLAS+S PGS+WTNS SL DNDSPLRPSGAGEGGVGGGVART SDGAA+VG AAEGP+RLD+ETDTGMGRG+GGMGA VD TGSPT IVEISDKR+LLRVLGA+GEGQGPVVVMYHAPWCRKCAYL PVFRRLAAAQATSVG  +A GSSSD G S  PLFCRVDVS PSWG+RRAVRG+SVAP TVASEG+AA                   RA+NKA+IAAGASSQ RGLGVGDRAAGL+AAD       AEG IAE ELLHAGSQAVENCDVCGGSGFVP                                       GGKCYMCD
Sbjct:    1 MTASCGVLGSATFLVAVSGLLDPPLVPPIGLSPFHPSAPAPPPSLFRSDKRRGSFCGGPLASTARMRKRCLQAGNESPGTGDEGVNAAAAGRRHGSGHGMFDADAWKNMPSSPPLVTAPPTSLNPSAVQLSANGALDDEGGVEGREEPISVYVDKLPTFVFFVRDNGRHRREEVTGGRDARTCATKLRERLASISSPGSTWTNSGSLDDNDSPLRPSGAGEGGVGGGVARTRSDGAAVVGGAAEGPNRLDNETDTGMGRGNGGMGAIVDGTGSPTNIVEISDKRELLRVLGARGEGQGPVVVMYHAPWCRKCAYLAPVFRRLAAAQATSVGVTKAGGSSSDRGSSGGPLFCRVDVSDPSWGRRRAVRGSSVAPATVASEGTAAXXXXXXXXXXXXXXXXXVRRARNKASIAAGASSQARGLGVGDRAAGLMAADATATPANAEGKIAETELLHAGSQAVENCDVCGGSGFVPCGECGGLGAVSRASPDGKHTMAVTCSSCVGYKRLRCPSCGGKCYMCD 519

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig5593.15909.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig5593.15909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FW10_ECTSI	4.940e-251	83.89	Serine/threonine protein kinase n=1 Tax=Ectocarpus...	[more]
A0A6H5JLH3_9PHAE	3.480e-244	74.37	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10		coord: 266..340 e-value: 5.0E-6 score: 28.1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 22..28
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..28
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 29..509
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..9
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 10..21
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.478
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 273..324
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 448..507

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig5593	contig	Ecto-sp13_S_contig5593:615..2144 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig5593.15909.1	mRNA_Ecto-sp13_S_contig5593.15909.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig5593 615..2402 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig5593.15909.1 ID=prot_Ecto-sp13_S_contig5593.15909.1|Name=mRNA_Ecto-sp13_S_contig5593.15909.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=510bp
MTASRGVMGSATFLVAVSGLLDPPLVPPNGLSPFHRSAPAPPPILFRSNT
RRGSFCAGLLASTARRRKRCLQAGNESPGTGDEGVNAAAGGRRHGSGHGI
FDANAWKNMPSSPPPVTAPTTSLYPSAVQLSSNDALDGEREEMHEEPINV
DVEKLPTFVFFVRVNGRHRREEVVGGRDARTCAAELRKRLASVSLPGSSW
TNSVSLVDNDSPLRPSGAGEGGVGGGVARTSSDGAALVGEAAEGPDRLDD
ETDTGMGRGSGGMGANVDVTGSPTTIVEISDKRDLLRVLGAKGEGQGPVV
VMYHAPWCRKCAYLTPVFRRLAAAQATSVGGREADGSSSDMGPSERPLFC
RVDVSHPSWGKRRAVRGASVAPPTVASEGSAAAAAADTAVTGRAQNKAAI
AAGASSQVRGLGVGDRAAGLVAADATAATAEAEGTIAEMELLHAGSQAVE
NCDVCGGSGFVPCGECGGRGAVSRSSPDGKHTIAVTCPSCVGYKRLRCPS
CGGKCYMCD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR036410	HSP_DnaJ_Cys-rich_dom_sf