prot_Ecto-sp13_S_contig5592.15908.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5592.15908.1
Unique Nameprot_Ecto-sp13_S_contig5592.15908.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length90
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5592.15908.1 vs. uniprot
Match: D8LNI8_ECTSI (EsV-1-8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI8_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 2.720e-35
Identity = 71/92 (77.17%), Postives = 75/92 (81.52%), Query Frame = 0 
Query:    1 MARSEGMADVDYDGPRKTSKGMGGEVEAGGGEGVRDIAAGL---GRNSVVHTASNDGCVVGAEGGDEGLRLEVLLLLGIGLEGLFRTVWGFL 89
            MARSEGMA  DY  P  T  G GGEVEAGGGE V+DIAAGL    R SVVHTASNDGCVVGAEGG+EGLRLEVLLLLG+GLEG+FR V GFL
Sbjct:  135 MARSEGMAGADYGRPGTTRNGAGGEVEAGGGEEVQDIAAGLLGLRRKSVVHTASNDGCVVGAEGGEEGLRLEVLLLLGLGLEGVFRAVVGFL 226
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5592.15908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNI8_ECTSI2.720e-3577.17EsV-1-8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5592contigEcto-sp13_S_contig5592:645..914 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5592.15908.1mRNA_Ecto-sp13_S_contig5592.15908.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5592 585..6944 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5592.15908.1 ID=prot_Ecto-sp13_S_contig5592.15908.1|Name=mRNA_Ecto-sp13_S_contig5592.15908.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=90bp
MARSEGMADVDYDGPRKTSKGMGGEVEAGGGEGVRDIAAGLGRNSVVHTA
SNDGCVVGAEGGDEGLRLEVLLLLGIGLEGLFRTVWGFL*
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