prot_Ecto-sp13_S_contig5579.15887.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5579.15887.1
Unique Nameprot_Ecto-sp13_S_contig5579.15887.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length103
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5579.15887.1 vs. uniprot
Match: A0A6H5JXJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXJ1_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 7.100e-34
Identity = 76/94 (80.85%), Postives = 77/94 (81.91%), Query Frame = 0 
Query:    1 EWEALRRENEDLRRQVALSEKRCGALSEMQRLADDALAAAHPLPFSSPPANTTAPERPPPPRQEKTDGVLSPAGVPFPASSVEEGEEGRREQCA 94
            EWEALRREN+DLRRQVALSEKRCGALSEMQRLADDALAA HPLPFSSPPA T APERP PPRQE TDGVLS       ASSVEEGEE     CA
Sbjct:  497 EWEALRRENDDLRRQVALSEKRCGALSEMQRLADDALAATHPLPFSSPPAGTMAPERPSPPRQEATDGVLS------LASSVEEGEERXXXXCA 584
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BLAST of mRNA_Ecto-sp13_S_contig5579.15887.1 vs. uniprot
Match: D8LAY5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY5_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 1.380e-23
Identity = 54/57 (94.74%), Postives = 54/57 (94.74%), Query Frame = 0 
Query:    1 EWEALRRENEDLRRQVALSEKRCGALSEMQRLADDALAAAHPLPFSSPPANTTAPER 57
            EWEALRRENEDLRRQVALSEKRCGALSEMQRLADDALAA HPLPF SPPA TTAPER
Sbjct:  656 EWEALRRENEDLRRQVALSEKRCGALSEMQRLADDALAATHPLPFCSPPAGTTAPER 712
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5579.15887.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXJ1_9PHAE7.100e-3480.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LAY5_ECTSI1.380e-2394.74Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5579contigEcto-sp13_S_contig5579:69..865 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5579.15887.1mRNA_Ecto-sp13_S_contig5579.15887.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5579 68..865 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5579.15887.1 ID=prot_Ecto-sp13_S_contig5579.15887.1|Name=mRNA_Ecto-sp13_S_contig5579.15887.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp
EWEALRRENEDLRRQVALSEKRCGALSEMQRLADDALAAAHPLPFSSPPA
NTTAPERPPPPRQEKTDGVLSPAGVPFPASSVEEGEEGRREQCATGEGGD
EDG
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