prot_Ecto-sp13_S_contig2012.6582.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig2012.6582.1
Unique Nameprot_Ecto-sp13_S_contig2012.6582.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length291
Homology
BLAST of mRNA_Ecto-sp13_S_contig2012.6582.1 vs. uniprot
Match: D7FH68_ECTSI (Aa_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH68_ECTSI)

HSP 1 Score: 539 bits (1389), Expect = 2.610e-192
Identity = 273/291 (93.81%), Postives = 280/291 (96.22%), Query Frame = 0
Query:    1 MLCSCARRTGQITYVEVGQAAFGEPGAIVTTSVLMAMTIFVTIAYMVLVRDIWSGIVESVIGETLDSDQSNYIGYRSVEANQEDPTAKLELKLNADSWGDIMEAFPIFCLSFQCHFNILSVHSHFVNPTRERLKGLLHGTMGLTSGLYIVLALCGYLYAYEDTKDDILLNFAPSDRVMIVGRVGMGVTMLVAITILVLPCRDIVFLVMDSVAEKLQGWCDGGKDYLPVDGSGEELTTPGGTRVNKTRTFFLAVRHVGTTVVIMGFSLFCALSVPGVGVVWSICGSSVRLLV 291
            MLCSCARRTGQITYVEVGQAAFGEPGAIVTTSVLMAMTIFVTIAYMVLVRDIWSGIVESVIGETLDSDQSN+IGYRSVEANQEDPTAKL LKLNADSWGDIMEAFPIFCLSFQCHFNILSVHSHFVNPTRERLKGLLHGTMGLTSGLYIVLALCGYLYAYE TKDDILLNFAPSDRVMIVGR+GMG+TMLVAITILVLPCRDIVFLVMDSVAEKLQ WC GGK+YLPVDG+GE LTTPGGT V KTR FFLAVRHVGTTV IMGFSLFCALSVPGVGVVWSICGSSV  ++
Sbjct:    1 MLCSCARRTGQITYVEVGQAAFGEPGAIVTTSVLMAMTIFVTIAYMVLVRDIWSGIVESVIGETLDSDQSNHIGYRSVEANQEDPTAKLGLKLNADSWGDIMEAFPIFCLSFQCHFNILSVHSHFVNPTRERLKGLLHGTMGLTSGLYIVLALCGYLYAYEGTKDDILLNFAPSDRVMIVGRLGMGLTMLVAITILVLPCRDIVFLVMDSVAEKLQEWCAGGKEYLPVDGTGEVLTTPGGTMVTKTRAFFLAVRHVGTTVAIMGFSLFCALSVPGVGVVWSICGSSVGFMI 291          
BLAST of mRNA_Ecto-sp13_S_contig2012.6582.1 vs. uniprot
Match: A0A835YKB4_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKB4_9STRA)

HSP 1 Score: 209 bits (531), Expect = 4.840e-61
Identity = 129/342 (37.72%), Postives = 178/342 (52.05%), Query Frame = 0
Query:   17 VGQAAFGEPGAIVTTSVLMAMTIFVTIAYMVLVRDIWSGIVESVIGETLDSD---------QSNY--------------------------------------IGYRSVEANQEDPTAKLELKLNADSWGDIMEAFPIFCLSFQCHFNILSVHSHFVNPTRERLKGLLHGTMGLTSGLYIVLALCGYLYAYEDTKDDILLNFAPSDRVMIVGRVGMGVTMLVAITILVLPCRDIVFLVMDSVAEKLQGWCDGGKDYLPVDGSGEELTTPGGTRVN--------------------KTRTFFLAVRHVGTTVVIMGFSLFCALSVPGVGVVWSICGSSVRLLV 291
            V + AFG  G   TT +L+ MT+FV +AYM+LVRDIWSG++  ++G   +++         +SN+                                      IGYR  E N E P A+ +      +   I+ AFPI  L+F C FNILSVH+  VNPTRERLKG++H ++G    +Y+ L   GY YAY +T+DDILLNFAPSD+V++ GR+G+G+TMLVAI +L+LPCRD    +   + E +       K    + G+G   +    + +N                      R    A RH  TTV +M F LF A+S+PGV +VWSICGSSV   V
Sbjct:   49 VAKVAFGPTGGYATTLILLCMTLFVLLAYMILVRDIWSGLIGLLVGWFTENEAGEVIFTPEESNWVLVGCLIATLPACLAKSLHALRHMCYVGFFSALVLTVAIGYRCFEYNTEHPEARKQAVAFTSNASQILGAFPIMSLAFMCQFNILSVHASLVNPTRERLKGIIHSSLGAGGSIYLALGFLGYFYAYGNTQDDILLNFAPSDKVVVWGRLGLGITMLVAIPMLLLPCRDAFEELASQLYEVVTAKFSARKTTPLISGNGASSSRGNYSSLNGELGATGSFDTSSMDANVAAALRRVMKAARHFMTTVGLMIFCLFFAVSIPGVALVWSICGSSVGFFV 390          
BLAST of mRNA_Ecto-sp13_S_contig2012.6582.1 vs. uniprot
Match: A0A7S2UXQ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXQ2_9STRA)

HSP 1 Score: 187 bits (476), Expect = 1.120e-53
Identity = 111/311 (35.69%), Postives = 174/311 (55.95%), Query Frame = 0
Query:   29 VTTSVLMAMTIFVTIAYMVLVRDIWSGIVESVIGETLDSDQSNY--------------------------------------IGYRSVEANQEDPT--AKLELKLNADSWGDIMEAFPIFCLSFQCHFNILSVHSHFVNPTRERLKGLLHGTMGLTSGLYIVLALCGYLYAYEDTKDDILLNFAPSDRVMIVGRVGMGVTMLVAITILVLPCRDIVFLVMDSVAEKLQGWCDGGKDY-----LPVDGSGEELTTPGGTRV---NKTRTFFLAVRHVGTTVVIMGFSLFCALSVPGVGVVWSICGSSVRLLV 291
            + T  L+ MT F+ +AY +L+RDI SG+VE  +G  +  +QSNY                                      I YRS+  N E+P   A   L +  D +GD++ + PI  L F CHFN+LSVHS  VNPTR+R+K ++H  M L++ +Y+++ L GY YAYE+TKD+I LNF+ SD++++VGRVG+  T+  A+ ++ +PCR+ +    +S+A+ L+  C G +       +    S ++ T+ G   +   N+  T    V+HV +T  ++ F L  A+  PGV VVWS+CGSS+ ++V
Sbjct:    3 IVTLCLLLMTFFIMVAYEILIRDIASGLVEFTLGHEITKEQSNYVLVVCNLFVSPLCYFTSLYALRYTCYIGFGSVMVLTASICYRSLSFNAENPMEFAARSLAVTTD-FGDVLYSLPIMSLVFLCHFNMLSVHSQLVNPTRQRVKSMIHSAMSLSTLIYLLMGLLGYFYAYENTKDNIFLNFSFSDKLLVVGRVGLFATLTCALPMMAIPCRENLLEFYNSIADWLEKCCGGTETQGLLTTVQNSPSTQDPTSAGRRNIQMPNERMTTGQLVKHVVSTTFVIAFCLVIAICTPGVAVVWSVCGSSLGMMV 312          
BLAST of mRNA_Ecto-sp13_S_contig2012.6582.1 vs. uniprot
Match: A0A7S4D5B8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5B8_HETAK)

HSP 1 Score: 173 bits (438), Expect = 1.190e-46
Identity = 123/349 (35.24%), Postives = 174/349 (49.86%), Query Frame = 0
Query:    1 MLCSCARRTGQITYVEVGQAAFGEPGAIVTTSVLMAMTIFVTIAYMVLVRDIWSGIVESVIGETLDSDQSN--------------------------YIGYRSV------------EANQEDPTAKLELKLNAD-SWGDIMEAFPIFCLSFQCHFNILSVHSHFVNPTRERLKGLLHGTMGLTSGLYIVLALCGYLYAYEDTKDDILLNFAPSDRVMIVGRVGMGVTMLVAITILVLPCRDIVFLVMDSVA--------------EKLQGWCDGGKDYLPV------DGSGEELTTPGGTRVNKTRTFFLAVRHVGTTVVIMGFSLFCALSVPGVGVVWSICGSSVRLL 290
            +LCSCARR+G  +YVEV + AFG+ G  + T +L    +FV +AY VL+RDI SGIVE  +G  LD D  N                          Y+G+ +V              N+ +P+        A+ S  D     PI  +S+ C FN+LSVHS   +PTR R+K  +H  +GL + +Y V A+ GY  AY DT ++I  NF PS+++++VGR G+ VT+L    ++VLPCR+   L                    EK Q      +DY         DGS  +L   G            AVRHV  TV+I+G +L+ A+ +PGV VVWSI GS++ L+
Sbjct:  127 ILCSCARRSGMPSYVEVAKHAFGKKGGQLITIMLAVFILFVVVAYQVLIRDIASGIVEFFLGYDLDMDGRNKVLYVCVLMIAPLCFFKSLHALRYTCYLGFAAVCLLVGSLVYLGWAFNRAEPSLWATYARPAEASVADFFYVLPILAVSYVCQFNMLSVHSQLKHPTRGRMKTTIHLAIGLATLIYAVGAMAGYSCAYMDTNENIFNNFEPSNKLLLVGRCGLFVTLLCNTPMMVLPCRESALLXXXXXXXXXXXXXXXXGPRLEKTQLLGQESQDYSAEAADSFDDGSQRQLGEGGDGGCGG------AVRHVAFTVLILGLALYLAVCIPGVAVVWSIAGSTMGLV 469          
BLAST of mRNA_Ecto-sp13_S_contig2012.6582.1 vs. uniprot
Match: A0A7S4RNK3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RNK3_9STRA)

HSP 1 Score: 157 bits (396), Expect = 2.270e-41
Identity = 114/360 (31.67%), Postives = 177/360 (49.17%), Query Frame = 0
Query:    1 MLCSCARRTGQITYVEVGQAAFGEPGAIVTTSVLMAMTIFVTIAYMVLVRDIWS--------------------------GIVESVIGETLDSD-----QSNYIGYRSVE---------ANQEDPTAK----LELKLNADSWGDIMEAFPIFCLSFQCHFNILSVHSHFVNPTRERLKGLLHGTMGLTSGLYIVLALCGYLYAYEDTKDDILLNFAPSDRVMIVGRVGMGVTMLVAITILVLPCRDIVFLVMDSVAEKLQGWCDGGKDYLP-VDGSGEE--LTTPGGT----------------------RVNKTRTFFLAVRHVGTTVVIMGFSLFCALSVPGVGVVWSICGSSVRLLV 291
            +LCS  RRTG  +Y +V + A+G    +  T VL    +FV +AYMVLVRDI++                          GIV ++I   L  D      + Y+G+ S+          A +  P +     L +K+   S+ D++ AFPI  LSF C FN+L +    VNPTR+R++ ++ G +  +  L     L GYLYA +DT  +ILLNF P DRV+IVG+VG GVT+ +A+ +++LPCR+ +     ++  +L+ W     + +  + G+ +E   +   GT                       V         + HV +T++I      CA++ PGV VVWSICGSS+  ++
Sbjct:   11 ILCSSGRRTGATSYADVCRRAYGPGLELFLTLVLFVFLMFVMVAYMVLVRDIFTPIVSPLATSFMQGEPDTAAVGDYVLLGIVIAMIPFFLQKDLHALRYNCYVGFVSISVLCVAIAYRAWENYPASSSNGSLNIKMFPSSFVDVLFAFPIPILSFMCQFNVLGIQGSLVNPTRQRIRQIIDGAVAASFVLTFSFGLGGYLYAGDDTNGNILLNFEPGDRVIIVGKVGCGVTITLAMAMMLLPCRETLL----ALGPQLRAWKQNNNNEISDMKGTEDEEIASIQSGTSSGYGAVSEEMPLITEAMSGYHHVEAASRLTEILTHVFSTLIIASICYACAVAAPGVAVVWSICGSSLAFII 366          
BLAST of mRNA_Ecto-sp13_S_contig2012.6582.1 vs. uniprot
Match: A0A7S4RQ47_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RQ47_9STRA)

HSP 1 Score: 156 bits (395), Expect = 9.100e-41
Identity = 116/360 (32.22%), Postives = 177/360 (49.17%), Query Frame = 0
Query:    1 MLCSCARRTGQITYVEVGQAAFGEPGAIVTTSVLMAMTIFVTIAYMVLVRDIWS--------------------------GIVESVIGETLDSD-----QSNYIGYRSVE---------ANQEDPTAK----LELKLNADSWGDIMEAFPIFCLSFQCHFNILSVHSHFVNPTRERLKGLLHGTMGLTSGLYIVLALCGYLYAYEDTKDDILLNFAPSDRVMIVGRVGMGVTMLVAITILVLPCRDIVFLVMDSVAEKLQGWCDGGKDYLP-VDGSGEE--LTTPGGT----------------------RVNKTRTFFLAVRHVGTTVVIMGFSLFCALSVPGVGVVWSICGSSVRLLV 291
            +LCS  RRTG  +Y +V + A+G    +  T VL    +FV +AYMVLVRDI++                          GIV ++I   L  D      + Y+G+ S+          A +  P +     L +K+   S+ D++ AFPI  LSF C FN+L +    VNPTR+R++ ++ G +  +  L     L GYLYA +DT  +ILLNF P DRV+IVG+VG GVT+ +A+ +++LPCR+ +     ++  +L+ W     + +  + G+ +E   +   GT                       V         + HV +T++I      CA++ PGV VVWSICGSS+  LV
Sbjct:  112 ILCSSGRRTGATSYADVCRRAYGPGLELFLTLVLFVFLMFVMVAYMVLVRDIFTPIVSPLATSFMQGEPDTAAVGDYVLLGIVIAMIPFFLQKDLHALRYNCYVGFVSISVLCVAIAYRAWENYPASSSNGSLNIKMFPSSFVDVLFAFPIPILSFMCQFNVLGIQGSLVNPTRQRIRQIIDGAVAASFVLTFSFGLGGYLYAGDDTNGNILLNFEPGDRVIIVGKVGCGVTITLAMAMMLLPCRETLL----ALGPQLRAWKQNNNNEISDMKGTEDEEIASIQSGTSSGYGAVSEEMPLITEAMSGYHHVEAASRLTEILTHVFSTLIIASICYACAVAAPGVAVVWSICGSSLVSLV 467          
BLAST of mRNA_Ecto-sp13_S_contig2012.6582.1 vs. uniprot
Match: A0A6H5J7N9_9PHAE (Aa_trans domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7N9_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 8.650e-39
Identity = 80/118 (67.80%), Postives = 80/118 (67.80%), Query Frame = 0
Query:   35 MAMTIFVTIAYMVLVRDIWSGIVESVIGETLDSDQSNY--------------------------------------IGYRSVEANQEDPTAKLELKLNADSWGDIMEAFPIFCLSFQC 114
            MAMTIFVTIAYMVLVRDIWSGIVESVIGETLDSDQSNY                                      IGYRSVEANQEDPTAKLELKLNADSWGDIMEAFPIFCLSFQC
Sbjct:    1 MAMTIFVTIAYMVLVRDIWSGIVESVIGETLDSDQSNYVLFVALLLVFPACLAKDLHALRHFCYVGFFSALVLTAAIGYRSVEANQEDPTAKLELKLNADSWGDIMEAFPIFCLSFQC 118          
BLAST of mRNA_Ecto-sp13_S_contig2012.6582.1 vs. uniprot
Match: A0A7S1BVU6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVU6_9STRA)

HSP 1 Score: 134 bits (336), Expect = 5.560e-32
Identity = 107/377 (28.38%), Postives = 167/377 (44.30%), Query Frame = 0
Query:    1 MLCSCARRTGQITYVEVGQAAFGEPGAIVTTSVLMAMTIFVTIAYMVLVRDIWSGIVESVIGETLDSDQSN-----------------------------YIGYRSVE--------------ANQEDPTAKLELKLNADSWGDIMEAFPIFCLSFQCHFNILSVHSHFVNPTRERLKGLLHGTMGLTSGLYIVLALCGYLYAYEDTKDDILLNFAPSDRVMIVGRVGMGVTMLVAITILVLPCRDIVFLVMDSVAEKLQGWCDGGKD-------------YLPVDGSGEELTTPGGTRVNKTR------------------------------TFFLAVRHVGTTVVIMGFSLFCALSVPGVGVVWSICGSSVRLLV 291
            +LC CARRTG  TY EV +  FG       T VL  +  F  +AYMVLVRDIWS +     G TL    +                              YI + S+               A  ED   K+ L    D + D++ A P+F LSF   +N+LSVH   V+PTR R++ ++ G++G    L+    + GY YA + T D+ILLNF P D+V+I+G++  G+++ +A+ ++VLP R+   ++   V    Q W +  ++              L    +    ++  GT V+ T                                    + H+G+T++++   L  A++ P V VVWSICGSS+  ++
Sbjct:  127 ILCCCARRTGVSTYGEVARRVFGRKTECGVTIVLFTLLAFFLVAYMVLVRDIWSTVYTFATGRTLSVGPAGGETVLLVGVVAMVSPFMLQRSLHPLRYNCYISFASISVLCVSIIYRAFQRGAMTEDFWDKV-LWYTTD-YRDVLFALPLFVLSFLATYNMLSVHCALVHPTRRRVREVIGGSIGSCCILFYAFGIGGYCYALDHTLDNILLNFDPHDKVIILGKISFGISLTLAMPLVVLPARECFLMIPVQV----QAWINETRECQTTLLHSQERARLLSSTRARHPSSSSMGTAVSVTSFDSEGAFDHDASSLSLGKVIAKPVIETVDPDTLEQIIHMGSTLLVVATCLVAAVAAPRVAVVWSICGSSLAFVI 497          
BLAST of mRNA_Ecto-sp13_S_contig2012.6582.1 vs. uniprot
Match: A0A8K1C5D8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5D8_PYTOL)

HSP 1 Score: 121 bits (304), Expect = 8.150e-28
Identity = 80/210 (38.10%), Postives = 119/210 (56.67%), Query Frame = 0
Query:   91 LKLNADSWGDIMEAFPIFCLSFQCHFNILSVHSHFVNPTRERLKGLLHGTMGLTSGLYIVLALCGYLYAYEDT---KDDILLNFAPSDRVMIVGRVGMGVTMLVAITILVLPCRDIVFLVMDSVAEKLQGWCDGGKDYLPVDGSGEEL---TTPGGTRVNKTRTFFLA---VRHVGTTVVIMGFSLFCALSVPGVGVVWSICGSSVRLLV 291
            +KL  D+W D + AFPI  +SF CHFN+L V+     PTR RLK ++  TM  T   Y+V+   GY +AY      KDDIL NFA +D+++ +GR+G+ VT+L+++ +++ PCR     +   V   LQ            + S EEL   TTP  TR    +T  +    + H   T++I+  ++  AL +PGV VVW+I GS+V LL+
Sbjct:  226 IKLFPDNWKDPVYAFPIISVSFLCHFNVLPVYRELKKPTRRRLKNIVTCTMASTWFFYMVVGFTGYFFAYRQVGGVKDDILNNFAGNDQLVNIGRLGLLVTILLSMPLIIQPCRRNSIRLYTYVQGFLQS----------SNQSSEELRLLTTPTVTREPLQQTAPVLSPKITHALLTILILTSTVSLALVLPGVAVVWNIMGSTVGLLI 425          
BLAST of mRNA_Ecto-sp13_S_contig2012.6582.1 vs. uniprot
Match: A0A7S2R5W0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R5W0_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.730e-27
Identity = 82/299 (27.42%), Postives = 139/299 (46.49%), Query Frame = 0
Query:    1 MLCSCARRTGQITYVEVGQAAFGEPGAIVTTSVLMAMTIFVTIAYMVLVRDIWSGIVESVIGETLDSDQSN---------------------------------------------YIG------------YRSVE----ANQEDPTAK-LELKLNADSWGDIMEAFPIFCLSFQCHFNILSVHSHFVNPTRERLKGLLHGTMGLTSGLYIVLALCGYLYAYEDTKDDILLNFAPSDRVMIVGRVGMGVTMLVAITILVLPCRDIVFLVMDSVAEKLQGWCDGGKDYLPVDGSGEELTT 237
            +LCSCARRTG  +Y EV +A+FG+   +  + +L    + V +A+MVLVR IW+ I+  +       ++ N                                             Y+G            YR+ E    +N    T +   +    D++ D + AFPI  L+F C +NI  + +  ++PTR+RL+ ++H ++ +   L  V  + GYLY+  +TKD+ILLNF  SDR+++ GR+G G  +++ + I+ LPCRD +  +       ++ W      Y  +  + +E  T
Sbjct:  122 ILCSCARRTGSQSYGEVARASFGDAMDLFISLLLFVFLMLVIVAFMVLVRGIWTPILLEIASFIFSPNEGNTTNNSSSINDVKMVNTYGDWFLLGIILVMTPFLLKKDLHALRYNCYVGFISITFLAFAIMYRAAERHLFSNSLSTTDETFTILWFTDNFADALYAFPIIALAFLCTYNIHQIQNTIIHPTRKRLRTVIHSSVTVCFVLMYVFGVAGYLYSGNNTKDNILLNFNVSDRLILFGRMGCGTNLMLNLAIVTLPCRDSMLAIWPQF---IKLWTKKSNKYNQIHSNDDESCT 417          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig2012.6582.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH68_ECTSI2.610e-19293.81Aa_trans domain-containing protein n=1 Tax=Ectocar... [more]
A0A835YKB4_9STRA4.840e-6137.72Transmembrane amino acid transporter protein-domai... [more]
A0A7S2UXQ2_9STRA1.120e-5335.69Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4D5B8_HETAK1.190e-4635.24Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4RNK3_9STRA2.270e-4131.67Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4RQ47_9STRA9.100e-4132.22Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6H5J7N9_9PHAE8.650e-3967.80Aa_trans domain-containing protein (Fragment) n=1 ... [more]
A0A7S1BVU6_9STRA5.560e-3228.38Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A8K1C5D8_PYTOL8.150e-2838.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2R5W0_9STRA1.730e-2727.42Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013057Amino acid transporter, transmembrane domainPFAMPF01490Aa_transcoord: 100..286
e-value: 2.1E-19
score: 69.5
NoneNo IPR availablePANTHERPTHR22950:SF478coord: 92..289
NoneNo IPR availablePANTHERPTHR22950AMINO ACID TRANSPORTERcoord: 92..289
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..198
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 260..282
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 199..259
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 160..178
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 283..291
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..159
NoneNo IPR availableTMHMMTMhelixcoord: 178..200
NoneNo IPR availableTMHMMTMhelixcoord: 260..282
NoneNo IPR availableTMHMMTMhelixcoord: 27..49
NoneNo IPR availableTMHMMTMhelixcoord: 136..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig2012contigEcto-sp13_S_contig2012:712..9431 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig2012.6582.1mRNA_Ecto-sp13_S_contig2012.6582.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig2012 712..9431 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig2012.6582.1 ID=prot_Ecto-sp13_S_contig2012.6582.1|Name=mRNA_Ecto-sp13_S_contig2012.6582.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=291bp
MLCSCARRTGQITYVEVGQAAFGEPGAIVTTSVLMAMTIFVTIAYMVLVR
DIWSGIVESVIGETLDSDQSNYIGYRSVEANQEDPTAKLELKLNADSWGD
IMEAFPIFCLSFQCHFNILSVHSHFVNPTRERLKGLLHGTMGLTSGLYIV
LALCGYLYAYEDTKDDILLNFAPSDRVMIVGRVGMGVTMLVAITILVLPC
RDIVFLVMDSVAEKLQGWCDGGKDYLPVDGSGEELTTPGGTRVNKTRTFF
LAVRHVGTTVVIMGFSLFCALSVPGVGVVWSICGSSVRLLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013057AA_transpt_TM