prot_Ecto-sp13_S_contig2011.6580.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig2011.6580.1
Unique Nameprot_Ecto-sp13_S_contig2011.6580.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length242
Homology
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BLAST of mRNA_Ecto-sp13_S_contig2011.6580.1 vs. uniprot
Match: A0A6H5JCY2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY2_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 3.110e-91
Identity = 213/241 (88.38%), Postives = 215/241 (89.21%), Query Frame = 0 
Query:    1 NGDAGKAGGTRLPRRQRDRERKAXXXXXXXXXSLLPLTGPSALAATINSTLTVTTGRVAGERAAGESITTSDSSFTSDSLSGXXXXXXXXXXXXXFGVATGDAGDVTPPPGHSLPWEHPPASPPPACMPNLHQSSGSEGPSGSEDDEGFGLGGGSIEYRKFLLRRSTSSAGAKETASRVSTPGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGGSAAGLPSTSASRQSANK 241
            NGD GKAGG RLPRRQRDRER A         SLLPLTGPSALAATINSTLTVTTGR+AGERAAGESITTSDSSFTSDSLSGXXXXXXXXXXXXX   A GD GDVTPPPGHSLPWEHPPASPPPACMPNLHQSSGSEGPSGSEDDEGFGL GGSIEYRKFLLRRST SAGAKETASRVSTPGRR     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGGSAAGLPSTSAS + ANK
Sbjct:  151 NGDDGKAGGARLPRRQRDRERNAKGSSPPPSPSLLPLTGPSALAATINSTLTVTTGRLAGERAAGESITTSDSSFTSDSLSGXXXXXXXXXXXXXXXXAAGDDGDVTPPPGHSLPWEHPPASPPPACMPNLHQSSGSEGPSGSEDDEGFGLCGGSIEYRKFLLRRSTLSAGAKETASRVSTPGRRGLGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGGSAAGLPSTSASSRPANK 391
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig2011.6580.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JCY2_9PHAE3.110e-9188.38Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig2011contigEcto-sp13_S_contig2011:10391..11116 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig2011.6580.1mRNA_Ecto-sp13_S_contig2011.6580.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig2011 10391..11116 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig2011.6580.1 ID=prot_Ecto-sp13_S_contig2011.6580.1|Name=mRNA_Ecto-sp13_S_contig2011.6580.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp
NGDAGKAGGTRLPRRQRDRERKAKGSSPPPPPSLLPLTGPSALAATINST
LTVTTGRVAGERAAGESITTSDSSFTSDSLSGGGGGGGGGGDGGGFGVAT
GDAGDVTPPPGHSLPWEHPPASPPPACMPNLHQSSGSEGPSGSEDDEGFG
LGGGSIEYRKFLLRRSTSSAGAKETASRVSTPGRRGLGTGSDNVEHKKFL
LRRASSSAGENDTAGASSSPPGGGSAAGLPSTSASRQSANKC
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