prot_Ecto-sp13_S_contig20003.6525.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig20003.6525.1
Unique Nameprot_Ecto-sp13_S_contig20003.6525.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length289
Homology
BLAST of mRNA_Ecto-sp13_S_contig20003.6525.1 vs. uniprot
Match: D8LJH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH2_ECTSI)

HSP 1 Score: 458 bits (1178), Expect = 5.990e-154
Identity = 232/252 (92.06%), Postives = 238/252 (94.44%), Query Frame = 0
Query:   39 FVKRLRSGRHTPLPWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSLFASTSQAFRRQPGV-PLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEEVFFRLGLLLCDADSPERHLLLGMKRVTNKTLMPCHVCPIGQEDLANGDYDIVRNRRTDDQTEYALKVISTATTGTQRQVLSSKHGVTPQEVENPFRKHVHMNMVRTFGIDVFHQDAQNSLRKIFKRLLGGLSKAKGVPLLS 289
            F  R ++G H    WNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLS FASTSQAFRRQPG  PLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEEVFFRLGLLLCDADSPER LLLGMKRVTNKTLMPCHVCPIGQEDLA+G+YDIVRNRRTDDQTEYALKVISTA TGTQRQ LSSKHGVTPQEVENPFRKHVH+NMVRTFGID+FHQDAQNSLRKIFKRLLGGLSKAKGVPLLS
Sbjct:  459 FYDRRQNGSH----WNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEEVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLS 706          
BLAST of mRNA_Ecto-sp13_S_contig20003.6525.1 vs. uniprot
Match: D7FWW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW6_ECTSI)

HSP 1 Score: 431 bits (1108), Expect = 7.690e-142
Identity = 237/319 (74.29%), Postives = 240/319 (75.24%), Query Frame = 0
Query:    1 DGVDLDTSKLVGRCEVVVSHDVHTGEDGSALPSFGGVGFVKRLRSGRHTPLP-----------------------------WNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSLFASTSQAFRRQPGV-PLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEEVFFRLGLLLCDADSPERHLLLGMKRVTNKTLMPCHVCPIGQEDLANGDYDIVRNRRTDDQTEYALKVISTATTGTQRQVLSSKHGVTPQEVENPFRKHVHMNMVRTFGIDVFHQDAQNSLRKIFKRLLGGLSKAKGVPLLS 289
            DGVDLDTSKLVGRCEVV S DVHTGEDGSALPSF GVGFVKRLRSGRHTPLP                             WNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLS FASTSQAFRRQPG  PLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEE                                          DLA+G+YDIVRNRRTDDQTEYALKVISTATTGTQRQ LSSKHGVTPQEVENPFRKHVH+NMVRTFGIDVFHQDAQNSL KIFKRLLGGLSKAKGVPLLS
Sbjct:  336 DGVDLDTSKLVGRCEVVGSDDVHTGEDGSALPSFRGVGFVKRLRSGRHTPLPSPDPAVKHLPWRPEGAERLFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEE------------------------------------------DLADGNYDIVRNRRTDDQTEYALKVISTATTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDVFHQDAQNSLLKIFKRLLGGLSKAKGVPLLS 612          
BLAST of mRNA_Ecto-sp13_S_contig20003.6525.1 vs. uniprot
Match: A0A6H5KYQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYQ6_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 2.380e-37
Identity = 97/310 (31.29%), Postives = 148/310 (47.74%), Query Frame = 0
Query:    2 GVDLDTSKLVGRCEVVVSHDVHTGEDGSALPSFGGVGFVKRLR----------SGRHTPLPWN------------------NDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSLFASTSQAFRRQ-PGVPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEEVFFRLGLLLCDADSPERHLLLGMKRVTNKTLMPCHVCPIGQEDLANGDYDIVRNRRTDDQTEYALKVISTATTGTQRQVLSSKHGVTPQEVENPFRKHVHMNMVRTFGIDVFHQDAQNSLRKIFKRLLGGLSKA 282
            G ++D S++ GRC+VV           S+   F   GF++R            SG+   LPW                   N     VF  P  +FTDAF+F  +GG  Y I AT  ++  ST++AFRR+     L  L APR RW+ +L  +   I  +Q GCRAR+ I  +                         + R  + T  PC+VC + Q++L +G YDI  N R  D  +++L ++    T T++ ++S++ GV    V NP R+H+H+N V++ G+D+ HQD  NS  +  K ++ GLS A
Sbjct:  245 GEEIDISRIEGRCDVVPHVQGAGAGSSSSGRVFSAAGFIRRCGKEKYKKVWSPSGQPKVLPWRFEGLYGLFFDKRAARVYFNKAGLPVFSIPLVIFTDAFNFFQRGGSPYSINATHFTI-GSTTRAFRRRLESWDLCSLGAPRARWEQELDGVFGTIGKMQNGCRARVCIDGE------------------------PVVRSGSGTFKPCNVCNVTQDELGDGQYDIAGNARMMDGIDHSLSLVRKEATKTKQGIVSTREGVVGAFVRNPVREHLHLNPVKSIGVDIMHQDPLNSFGRAMKAMVDGLSPA 529          
BLAST of mRNA_Ecto-sp13_S_contig20003.6525.1 vs. uniprot
Match: D7FGT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT2_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 2.490e-30
Identity = 67/110 (60.91%), Postives = 72/110 (65.45%), Query Frame = 0
Query:   39 FVKRLRSGRHTPLPWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSLFASTSQAFRRQPGVPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEE 148
            F  R R+G H    WN+D+ER VFLTPAHLFTDAFDFRNQ G                          PLVGLSAPRVRW+DDLGFILE ISVLQKGCRARLA ADKV+E
Sbjct:  107 FHDRRRTGNH----WNHDEERLVFLTPAHLFTDAFDFRNQLGAW------------------------PLVGLSAPRVRWKDDLGFILEAISVLQKGCRARLATADKVKE 188          
BLAST of mRNA_Ecto-sp13_S_contig20003.6525.1 vs. uniprot
Match: A0A6H5K6B6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6B6_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 7.590e-21
Identity = 57/84 (67.86%), Postives = 59/84 (70.24%), Query Frame = 0
Query:   39 FVKRLRSGRHTPLPWNNDKERRVFLTPAHLFTDAFDFRNQGGVS----YPIKATLLSLFASTSQAFRRQPGVPLVGLSAPRVRW 118
            F  R R+G H    WNN KERRVFLT AHL TDAFDFRNQ  VS    Y IKATLLS FASTSQAFR+     LVGLSA RVRW
Sbjct:  285 FYDRRRTGNH----WNNGKERRVFLTSAHLSTDAFDFRNQASVSRRASYSIKATLLSPFASTSQAFRQPGAWLLVGLSALRVRW 364          
BLAST of mRNA_Ecto-sp13_S_contig20003.6525.1 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 1.010e-13
Identity = 55/158 (34.81%), Postives = 73/158 (46.20%), Query Frame = 0
Query:  126 LEVISVLQKGCRARLAIADK-VEEVFFRLGLLLCDADSPERHLLLGMKRVTNKTLMPCHVCPIGQEDLANGDYDIVRNRRTDDQTEYALKVISTATTGTQRQVLSSKHGVTPQEVENPFRKHVHMNMVRTFGIDVFHQDAQNSLRKIFKRLLGGLSKA 282
            +++I  LQ GC+A  +I DK       RLGLL  + DSP   L    K    KT   C  C + + DL N  YDIV+N RT D     L  ++       R  LS   GV      NP +  V  + V   G+D+ HQ A NS +KI   ++  L  A
Sbjct:    1 MKIIRRLQNGCKAEFSIGDKQTVTALVRLGLLTANLDSPLHSLWTNQKHHNAKTERACQACVVPRRDLGNPKYDIVKNARTADGLREDLSRVAATEKKQDRDKLSRALGVVVPRYPNP-QDEVAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDPA 157          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig20003.6525.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LJH2_ECTSI5.990e-15492.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWW6_ECTSI7.690e-14274.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYQ6_9PHAE2.380e-3731.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGT2_ECTSI2.490e-3060.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6B6_9PHAE7.590e-2167.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWW9_ECTSI1.010e-1334.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig20003contigEcto-sp13_S_contig20003:730..3197 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig20003.6525.1mRNA_Ecto-sp13_S_contig20003.6525.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig20003 730..3197 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig20003.6525.1 ID=prot_Ecto-sp13_S_contig20003.6525.1|Name=mRNA_Ecto-sp13_S_contig20003.6525.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=289bp
DGVDLDTSKLVGRCEVVVSHDVHTGEDGSALPSFGGVGFVKRLRSGRHTP
LPWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSLFASTSQAF
RRQPGVPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVEEVF
FRLGLLLCDADSPERHLLLGMKRVTNKTLMPCHVCPIGQEDLANGDYDIV
RNRRTDDQTEYALKVISTATTGTQRQVLSSKHGVTPQEVENPFRKHVHMN
MVRTFGIDVFHQDAQNSLRKIFKRLLGGLSKAKGVPLLS
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