prot_Ecto-sp13_S_contig1999.6498.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1999.6498.1
Unique Nameprot_Ecto-sp13_S_contig1999.6498.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length341
Homology
BLAST of mRNA_Ecto-sp13_S_contig1999.6498.1 vs. uniprot
Match: D8LEW1_ECTSI (D27-like_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW1_ECTSI)

HSP 1 Score: 504 bits (1298), Expect = 6.140e-178
Identity = 258/271 (95.20%), Postives = 260/271 (95.94%), Query Frame = 0
Query:    1 MRSGAIAVLALVRAVLLVPSVTAYIPTSTSTSKSAWVAPPHRCSTRCRARSSSTIGDSTASDPVGGAGIEPADAAKPSLKVIRGRAGPADATPTYDDTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRIVPTEEFFAKDMGLALEMTPNYEDFSCQ 271
            MRSG IAVLA VRAVLLVP+VTAYIPTSTSTSKSAW+APPHRCSTRCRARSSSTIG STA DPVGGAGIEPADAAKP LKVIRGRAGP DATPTYDDTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCK     VPTEEFFAKDMGLALEMTPNYEDFSCQ
Sbjct:    1 MRSGVIAVLAFVRAVLLVPNVTAYIPTSTSTSKSAWIAPPHRCSTRCRARSSSTIGGSTALDPVGGAGIEPADAAKPPLKVIRGRAGPTDATPTYDDTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCK-----VPTEEFFAKDMGLALEMTPNYEDFSCQ 266          
BLAST of mRNA_Ecto-sp13_S_contig1999.6498.1 vs. uniprot
Match: A0A6H5K8Y9_9PHAE (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y9_9PHAE)

HSP 1 Score: 392 bits (1007), Expect = 9.850e-129
Identity = 215/271 (79.34%), Postives = 218/271 (80.44%), Query Frame = 0
Query:    1 MRSGAIAVLALVRAVLLVPSVTAYIPTSTSTSKSAWVAPPHRCSTRCRARSSSTIGDSTASDPVGGAGIEPADAAKPSLKVIRGRAGPADATPTYDDTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRIVPTEEFFAKDMGLALEMTPNYEDFSCQ 271
            M+SGAIA LA   AVLLVP VTAYI TSTSTS SA VAPPHRCSTRCRARSSSTIG STASD VGGAGIEPADAAKP LKVIRGRAGP  ATPTYDDTRPLDRILLGLFRSKLAEEVG DGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFP+WLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLND+E                                       VPTEEFFAKDMGLALEMTPNYEDFSCQ
Sbjct:    1 MKSGAIAPLAFFCAVLLVPKVTAYILTSTSTSISALVAPPHRCSTRCRARSSSTIGGSTASDSVGGAGIEPADAAKPPLKVIRGRAGPTAATPTYDDTRPLDRILLGLFRSKLAEEVGEDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPAWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDVE---------------------------------------VPTEEFFAKDMGLALEMTPNYEDFSCQ 232          
BLAST of mRNA_Ecto-sp13_S_contig1999.6498.1 vs. uniprot
Match: A0A835ZDY9_9STRA (D27-like_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDY9_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.020e-75
Identity = 115/170 (67.65%), Postives = 141/170 (82.94%), Query Frame = 0
Query:  104 ILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEK--FPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRIVPTEEFFAKDMGLALEMTPNYEDFSCQ 271
            +LLGLFR KLA E+  DG   +PGY GL++MI+ LN+   +P+   TQ+A+R+VL+SLFP WLP +FAVMFSKPFP FS R+NAWVTLVASQWLMGPSK+ND+EID G +GVGHGLLV+RCR+LE AGCASVC+NTCK     +PT+EFF KDMGL L+MTP+Y+DFSCQ
Sbjct:    1 MLLGLFRKKLAAELQYDGS--DPGYAGLIEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVEIDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCK-----IPTQEFFMKDMGLPLQMTPDYDDFSCQ 163          
BLAST of mRNA_Ecto-sp13_S_contig1999.6498.1 vs. uniprot
Match: A0A8J4BT63_9CHLO (D27-like_C domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BT63_9CHLO)

HSP 1 Score: 231 bits (588), Expect = 5.390e-71
Identity = 108/188 (57.45%), Postives = 140/188 (74.47%), Query Frame = 0
Query:   86 AGPADATPTYDD--TRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRIVPTEEFFAKDMGLALEMTPNYEDFSCQ 271
            AGP D  P+Y D  ++P++ +++ LFR K+   +G D + +  GYD ++D+ + LN KF +  +TQEA+R +L +LFPSWLP +F VMFSKPFP FS RLNA  T +  QWLMGP K+ND+EID G VG GHG+LVERCR+LE AGCASVC+N+CK     +PT+ FF+KDMGL L MTPNYEDFSCQ
Sbjct:   42 AGPTDPAPSYRDIDSQPVNVVVMALFRRKMVAALGSDSELY--GYDAIIDLTRRLNSKFRTGAETQEATRAILNALFPSWLPGAFKVMFSKPFPEFSCRLNALATALTCQWLMGPCKVNDVEIDGGIVGKGHGVLVERCRYLEQAGCASVCINSCK-----IPTQTFFSKDMGLQLTMTPNYEDFSCQ 222          
BLAST of mRNA_Ecto-sp13_S_contig1999.6498.1 vs. uniprot
Match: I0YX40_COCSC (D27-like_C domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YX40_COCSC)

HSP 1 Score: 228 bits (582), Expect = 1.510e-70
Identity = 105/189 (55.56%), Postives = 140/189 (74.07%), Query Frame = 0
Query:   85 RAGPADATPTYD--DTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRIVPTEEFFAKDMGLALEMTPNYEDFSCQ 271
            +AGP    P+Y+  D++PL+R ++ LFR K+   +G + D  + GYD ++D+ ++LN K  + R TQ  +R++L SLFPSWLP +F VMFSKP P  S +LNAWVT++  QWLMGP K+ND+E+D G +G G G+LVERCR+LE  GCASVC+N+CK     +PT+EFFAKDMGL L MTPNYEDFSCQ
Sbjct:    7 KAGPETPAPSYESIDSQPLNRAIMSLFRQKMVAAIGKNSD--KEGYDAIVDLTRLLNSKSSNPRDTQVKTRQILLSLFPSWLPPAFKVMFSKPMPEVSCQLNAWVTMLTCQWLMGPCKVNDVELDGGRIGSGQGVLVERCRYLEETGCASVCLNSCK-----IPTQEFFAKDMGLPLTMTPNYEDFSCQ 188          
BLAST of mRNA_Ecto-sp13_S_contig1999.6498.1 vs. uniprot
Match: A8IC34_CHLRE (Predicted protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IC34_CHLRE)

HSP 1 Score: 230 bits (586), Expect = 1.620e-70
Identity = 110/189 (58.20%), Postives = 138/189 (73.02%), Query Frame = 0
Query:   85 RAGPADATPTYD--DTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRIVPTEEFFAKDMGLALEMTPNYEDFSCQ 271
            +AGP DA P Y   D++PL+ I++ LFR K+ E +G D      GYD ++D+ + LN KF +  +TQEA+R +L +LFPSWLP +F VMFS+P P FS RLNA  T +  QWLMGP K+ND+EID G VG GHG+LVERCR+LE AGCASVC+N+CK     VPT+ FF KDMGL L MTPNY+DFSCQ
Sbjct:   50 QAGPVDAAPDYKPIDSQPLNIIVMALFRRKMVEALGSDSKL--SGYDAIIDLTRKLNTKFRTAAETQEATRGILNALFPSWLPGAFKVMFSRPLPEFSCRLNALATAMTCQWLMGPCKVNDVEIDGGKVGTGHGVLVERCRYLEQAGCASVCINSCK-----VPTQSFFEKDMGLPLTMTPNYDDFSCQ 231          
BLAST of mRNA_Ecto-sp13_S_contig1999.6498.1 vs. uniprot
Match: A0A7J7QQS2_9CHLO (D27-like_C domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QQS2_9CHLO)

HSP 1 Score: 224 bits (572), Expect = 5.510e-69
Identity = 104/189 (55.03%), Postives = 138/189 (73.02%), Query Frame = 0
Query:   85 RAGPADATPTYD--DTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRIVPTEEFFAKDMGLALEMTPNYEDFSCQ 271
            +AGP +  P Y   D++PL+++++ LFR K+   +G D      GY+ ++D+ + LN  +   R+ Q  +R++LKSLFPSWLP +FAVMFSKP P FS +LNA  T +  QWLMGP K+ND+E+DDG+VG G G+LVERCR+LE AGCAS+C+N+CK     VPT+EFF KDMGL L MTPNYEDFSCQ
Sbjct:    1 QAGPVEPVPDYTAIDSQPLNQVVMALFRRKMVAAIGSDSQL--SGYEAIIDLTRRLNASYSEARQVQLTTRKILKSLFPSWLPGAFAVMFSKPLPEFSCKLNALATALTCQWLMGPCKVNDVELDDGSVGQGMGVLVERCRYLEQAGCASICINSCK-----VPTQEFFEKDMGLPLTMTPNYEDFSCQ 182          
BLAST of mRNA_Ecto-sp13_S_contig1999.6498.1 vs. uniprot
Match: A0A0D2MYG1_9CHLO (D27-like_C domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MYG1_9CHLO)

HSP 1 Score: 225 bits (574), Expect = 1.540e-68
Identity = 107/189 (56.61%), Postives = 136/189 (71.96%), Query Frame = 0
Query:   85 RAGPADATPTYD--DTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRIVPTEEFFAKDMGLALEMTPNYEDFSCQ 271
            +AGP    P+Y   D +PL+R+++ LFR K+ E +G D      GY  ++D+ + LN ++ + R TQ A+RR+L SLFPSWLP +F VMFS P PAFS RLNA  T +  QWLMGP K+ND+E+D G VG G G+LVERCR+LE AGCAS+C+N+CK     VPT+EFF KDMGL L MTPNYEDFSCQ
Sbjct:   64 QAGPGTPAPSYAEIDAQPLNRVVMALFRRKMVESIGSDSQL--QGYPAIIDLTRRLNRQYQTARDTQLATRRILNSLFPSWLPGAFKVMFSAPLPAFSCRLNALATALTCQWLMGPCKVNDVELDSGEVGSGMGVLVERCRYLEEAGCASICINSCK-----VPTQEFFEKDMGLPLTMTPNYEDFSCQ 245          
BLAST of mRNA_Ecto-sp13_S_contig1999.6498.1 vs. uniprot
Match: A0A2V0P122_9CHLO (D27-like_C domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P122_9CHLO)

HSP 1 Score: 226 bits (576), Expect = 1.970e-68
Identity = 112/204 (54.90%), Postives = 144/204 (70.59%), Query Frame = 0
Query:   70 EPADAAKPSLKVIRGRAGPADATPTYD--DTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRIVPTEEFFAKDMGLALEMTPNYEDFSCQ 271
            E AD A P+   +R +AGPA A P Y   D +PL+R+++ LFR K+AE +G D      GY  ++D+ + LN ++P+ R TQ  +R +L SLFP WLP +F  MFS+P PA S RLNA+ T +  QWLMGP K+ND+EID G VG G G+LVERCR+LE AGCAS+C+N+CK     VPT+EFF KDMGL L MTPNY+DFSCQ
Sbjct:    9 EAADGAAPAA--LR-QAGPAAAAPDYAGVDAQPLNRVVMALFRRKMAEAIGSDSQL--QGYPAIIDLTRRLNRQYPTARDTQLTTRAILNSLFPGWLPGAFRAMFSRPLPALSCRLNAFATALTCQWLMGPCKVNDVEIDGGQVGAGMGVLVERCRYLEEAGCASICINSCK-----VPTQEFFEKDMGLPLTMTPNYDDFSCQ 202          
BLAST of mRNA_Ecto-sp13_S_contig1999.6498.1 vs. uniprot
Match: A0A2J8AIV6_9CHLO (D27-like_C domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AIV6_9CHLO)

HSP 1 Score: 222 bits (566), Expect = 3.930e-66
Identity = 105/182 (57.69%), Postives = 135/182 (74.18%), Query Frame = 0
Query:   92 TPTYD--DTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRIVPTEEFFAKDMGLALEMTPNYEDFSCQ 271
            TP+Y   D +PL++I++ LFR K+   VG D      GYD ++D+ + LN KF +  +TQEA+R +L +LFPSWLP +F VMF++P P  S R+NA  T +  QWLMGP K+ND+E DDGTVG GHG+LVERCR+LE AGCA+VC+N+CK     VPT+ FFAKDMGLAL MTPNY+DFSCQ
Sbjct:  171 TPSYAAIDVQPLNKIVMALFRRKMVAAVGSDSPL--SGYDAIIDLTRRLNNKFRTAAETQEATRSILIALFPSWLPGAFKVMFARPLPELSCRMNALATALTCQWLMGPCKVNDVETDDGTVGEGHGVLVERCRYLEQAGCAAVCINSCK-----VPTQSFFAKDMGLALTMTPNYDDFSCQ 345          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1999.6498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEW1_ECTSI6.140e-17895.20D27-like_C domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5K8Y9_9PHAE9.850e-12979.34PROTEASOME_ALPHA_1 domain-containing protein n=1 T... [more]
A0A835ZDY9_9STRA1.020e-7567.65D27-like_C domain-containing protein n=1 Tax=Tribo... [more]
A0A8J4BT63_9CHLO5.390e-7157.45D27-like_C domain-containing protein n=2 Tax=Volvo... [more]
I0YX40_COCSC1.510e-7055.56D27-like_C domain-containing protein n=1 Tax=Cocco... [more]
A8IC34_CHLRE1.620e-7058.20Predicted protein n=2 Tax=Chlamydomonas reinhardti... [more]
A0A7J7QQS2_9CHLO5.510e-6955.03D27-like_C domain-containing protein n=1 Tax=Scene... [more]
A0A0D2MYG1_9CHLO1.540e-6856.61D27-like_C domain-containing protein n=1 Tax=Monor... [more]
A0A2V0P122_9CHLO1.970e-6854.90D27-like_C domain-containing protein n=1 Tax=Raphi... [more]
A0A2J8AIV6_9CHLO3.930e-6657.69D27-like_C domain-containing protein n=1 Tax=Tetra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025114Domain of unknown function DUF4033PFAMPF13225DUF4033coord: 194..271
e-value: 1.1E-25
score: 89.4
NoneNo IPR availablePANTHERPTHR33591:SF2BETA-CAROTENE ISOMERASE D27coord: 32..271
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..340
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.861
IPR038938Beta-carotene isomerase D27-likePANTHERPTHR33591FAMILY NOT NAMEDcoord: 32..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1999contigEcto-sp13_S_contig1999:7030..10740 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1999.6498.1mRNA_Ecto-sp13_S_contig1999.6498.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1999 7030..11189 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1999.6498.1 ID=prot_Ecto-sp13_S_contig1999.6498.1|Name=mRNA_Ecto-sp13_S_contig1999.6498.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=341bp
MRSGAIAVLALVRAVLLVPSVTAYIPTSTSTSKSAWVAPPHRCSTRCRAR
SSSTIGDSTASDPVGGAGIEPADAAKPSLKVIRGRAGPADATPTYDDTRP
LDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQE
ASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSK
LNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKARRRIVPTEEF
FAKDMGLALEMTPNYEDFSCQQWNTIRRLVRVVVRPHVPVFVQQDSVGER
HGRGVSGGVFRAMPVARSAEAAEPAGSRTVSSNRYRRGWQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025114DUF4033
IPR038938D27-like