prot_Ecto-sp13_S_contig19861.6448.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19861.6448.1
Unique Nameprot_Ecto-sp13_S_contig19861.6448.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length232
Homology
BLAST of mRNA_Ecto-sp13_S_contig19861.6448.1 vs. uniprot
Match: D7G6K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6K0_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 1.000e-25
Identity = 105/241 (43.57%), Postives = 114/241 (47.30%), Query Frame = 0
Query:    1 SGSDSEEGALVGAHAATASPASVAPPEAXXXXXXXXXXXXXXXXXXXXXXXIXXXXXXXAASGLLLAGQVAAADSPRASQGAAALIDQGPGYLDAPVSRRQAFSDSVGSDCSQSCCVAVMTPCPLAADVTAAEAHLR-------------RRRSVSGERVSKRGLPLRWGGRLSVRPLMVRMAARTRPVVRRGPWGRSPEGRVPLRLR-LVCPQFASRPPLRASRPSKRWRPRRRPARRLP 227
            SGSDSEEGALVGA AA ASP S AP  A   XXXXX               I       AASGL LA QVA A SPRASQGAA L  QG GYLDAP     A   S GS CS+SCCV    PCP    +  +   LR             RRRS S    ++  LPLR G RL+  P +               W   P    P RLR              AS PSKRW+PR+R  RRLP
Sbjct:   28 SGSDSEEGALVGAPAAAASPVSEAPSAAADNXXXXXGASCEDADFDDLANAIVAASAEAAASGLELADQVAEAASPRASQGAAVLEHQGSGYLDAPSG---AGRKSTGSGCSRSCCVTAAAPCPPWGLMPVSPVRLRPLPTWLRLKPVFGRRRSASDRHSARLSLPLRLGRRLTACPRLA--------------WSVPPRLVGPRRLRRXXXXXXXXXXXXXASPPSKRWKPRKRHGRRLP 251          
BLAST of mRNA_Ecto-sp13_S_contig19861.6448.1 vs. uniprot
Match: A0A6H5KZQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZQ9_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 9.560e-23
Identity = 93/107 (86.92%), Postives = 93/107 (86.92%), Query Frame = 0
Query:    1 SGSDSEEGALVGAHAATASPASVAPPEAXXXXXXXXXXXXXXXXXXXXXXXIXXXXXXXAASGLLLAGQVAAADSPRASQGAAALIDQGPGYLDAPVSRRQAFSDSV 107
            SGSDSEEGALVGA AATASPASV     XXXXXXXXXXXXXXXXXXXXXXXI       AASGLLLA QVAAADSPRASQGAAALIDQGPGYLDAPVSRRQAFSDSV
Sbjct:   28 SGSDSEEGALVGAPAATASPASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVAASANAAASGLLLASQVAAADSPRASQGAAALIDQGPGYLDAPVSRRQAFSDSV 134          
BLAST of mRNA_Ecto-sp13_S_contig19861.6448.1 vs. uniprot
Match: D7G3H7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H7_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 9.080e-6
Identity = 51/89 (57.30%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    1 SGSDSEEGALVGAHAATASPASVAPPEAXXXXXXXXXXXXXXXXXXXXXXXIXXXXXXXAASGLLLAGQVAAADSPRASQGAAALIDQG 89
            SGSDSEEGALVGA AA AS  S AP  A        XXXXXX         I       AASGL+LAGQVA A SPR SQGAAAL   G
Sbjct:   28 SGSDSEEGALVGAPAAAASLVSEAPSAAVDNSSEAAXXXXXXADGGDLANAIVATSAEAAASGLVLAGQVAEAASPRVSQGAAALTHPG 116          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19861.6448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G6K0_ECTSI1.000e-2543.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZQ9_9PHAE9.560e-2386.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3H7_ECTSI9.080e-657.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19861contigEcto-sp13_S_contig19861:2021..3093 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19861.6448.1mRNA_Ecto-sp13_S_contig19861.6448.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19861 2021..3093 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19861.6448.1 ID=prot_Ecto-sp13_S_contig19861.6448.1|Name=mRNA_Ecto-sp13_S_contig19861.6448.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=232bp
SGSDSEEGALVGAHAATASPASVAPPEAAGDSSEADGGSGGDADGGDLAN
AIVAASANAAASGLLLAGQVAAADSPRASQGAAALIDQGPGYLDAPVSRR
QAFSDSVGSDCSQSCCVAVMTPCPLAADVTAAEAHLRRRRSVSGERVSKR
GLPLRWGGRLSVRPLMVRMAARTRPVVRRGPWGRSPEGRVPLRLRLVCPQ
FASRPPLRASRPSKRWRPRRRPARRLPPTWP*
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