prot_Ecto-sp13_S_contig19854.6442.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19854.6442.1
Unique Nameprot_Ecto-sp13_S_contig19854.6442.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length300
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19854.6442.1 vs. uniprot
Match: A0A6H5L664_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L664_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 9.320e-92
Identity = 250/452 (55.31%), Postives = 258/452 (57.08%), Query Frame = 0 
Query:    1 SSREATRRLLGGDGGGKLVYDYVSMVSQDVATVYGLVQGGAFLDWQDSHRRRTPLHRAVYFGHSQILKILLAAGANPNVADNHAVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVYNRIGVTRLLLDASASSLEVHDLCLGITPLAWASKLSFTTMLRVLLNAGADVNSRSPAGSXXXXXXXXXXXXXXXXXXXXXXXXXDSLDNHGADAGS---------------------------------------LALSRARKDRTWRRRGWLVVVLARRQAMAMA-----------------------------------------------------------------------------------------------------------------LGSTGGDSTR-VGSGTGWTPERGAVEILLWLAAMEVGVFRNVMRYV 299
            SSREATRRLLGGD GGKLVYDYV+MVSQDVATV GL QGGAFLDWQD+HRRR+PLHRAVYFGH QILKILLAAGANPNVADNHAVT                XXXXXXXXXXXXXXXXXXXXX     RIGVTRLLLDASASSLEV D   GITPLAWASKLSFTTMLR+LL+ GADVNSRSP   XXXXXXXXXXXXXXXXXXXXXXXXXDSLDN GADAGS                                       LALS+ARKDRTWRRRGWLVV LARRQAM MA                                                                                                                 LGSTGGD T  VGSGTGW PERGA+E LLWLAAME GVFRNVMR+V
Sbjct:  211 SSREATRRLLGGDRGGKLVYDYVNMVSQDVATVCGLAQGGAFLDWQDNHRRRSPLHRAVYFGHFQILKILLAAGANPNVADNHAVTPLHMVAVKGCEAEAAEXXXXXXXXXXXXXXXXXXXXXXXXXXRIGVTRLLLDASASSLEVRDSFHGITPLAWASKLSFTTMLRILLSMGADVNSRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSLDNEGADAGSVTGLGDPPGHTGPQSPPILPGAANQTGRPKNGALATRIQLALSKARKDRTWRRRGWLVV-LARRQAMTMAVVPGTTSRASKTYVRGNQGHPRMTIPRIPVMTGVDGKMVVEDLTGADQKRTRVANETFSADGGGAETCRKENPDLHCKQTSIVRGEGASSFHRFFDGTGTNFTSLLSAPSSAQLGSTGGDITGYVGSGTGWAPERGAIETLLWLAAMEEGVFRNVMRFV 661
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BLAST of mRNA_Ecto-sp13_S_contig19854.6442.1 vs. uniprot
Match: D7G7M3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M3_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 2.710e-87
Identity = 234/294 (79.59%), Postives = 238/294 (80.95%), Query Frame = 0 
Query:    1 SSREATRRLLGGDGGGKLVYDYVSMVSQDVATVYGLVQGGAFLDWQDSHRRRTPLHRAVYFGHSQILKILLAAGANPNVADNHAVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVYNRIGVTRLLLDASASSLEVHDLCLGITPLAWASKLSFTTMLRVLLNAGADVNSRSPAGSXXXXXXXXXXXXXXXXXXXXXXXXXDSLDNHGADAGS---------------------------------------LALSRARKDRTWRRRGWLVVVLARRQAMAMAL 255
            SSREATRRLLGGD GGKLVYDYV+MVSQDVATVYGLVQGGAFLDWQDSHRRRTPLHRAVYFGH QILKILLAAGANPNVADN AVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   YNRIGVTRLLLDASASSLEV D   GITPLAWASKLSFT MLRVLL+ GADVNSRSPA  XXXXXXXXXXXXXXXXXXXXXXXXXDS DN GADAGS                                       LALS+ARKDRTWRRRGWLVV LARRQAMAMA+
Sbjct:  213 SSREATRRLLGGDRGGKLVYDYVNMVSQDVATVYGLVQGGAFLDWQDSHRRRTPLHRAVYFGHFQILKILLAAGANPNVADNLAVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNRIGVTRLLLDASASSLEVRDSYHGITPLAWASKLSFTLMLRVLLSTGADVNSRSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXDSADNEGADAGSAIGLGDPPRHAGPQSPPILLGAVNEIGRLNNEELATRIRLALSKARKDRTWRRRGWLVV-LARRQAMAMAV 505
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BLAST of mRNA_Ecto-sp13_S_contig19854.6442.1 vs. uniprot
Match: A0A6H5L5T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T2_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 1.630e-86
Identity = 222/444 (50.00%), Postives = 235/444 (52.93%), Query Frame = 0 
Query:    1 SSREATRRLLGGDGGGKLVYDYVSMVSQDVATVYGLVQGGAFLDWQDSHRRRTPLHRAVYFGHSQILKILLAAGANPNVADNHAVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVYNRIGVTRLLLDASASSLEVHDLCLGITPLAWASKLSFTTMLRVLLNAGADVNSRSPAGSXXXXXXXXXXXXXXXXXXXXXXXXXDSLDNHGADAGS---------------------------------------LALSRARKDRTWRRRGWLVVVLARRQAMAMAL--GST--------------------------------------------------------------------------------------------------------GGDSTRVGSGTGWTPERGAVEILLWLAAMEVGVFRNVMRYV 299
            SSREATRRLLGGD GGKLVYDYV+MVSQDVATV GL QGGAFLDWQD+HRRR+PLHRAVYFGH QILKILLAAGANPNVADNHAVT                                     AVVYNRIGVTRLLLDASASSLEV D   GITPLAWASK SF TMLR+LL+ GADVNSRSPA  XXXXXXXXXXXXXXXXXXXXXXXXXDSLDN GADAGS                                       LALS ARKDRTWRRRGWLVV LARRQAMAMA+  G+T                                                                                                        GG +  +   TGWTP +G V+ LL LAA+EVGVFR VMRY+
Sbjct:  204 SSREATRRLLGGDRGGKLVYDYVNMVSQDVATVCGLAQGGAFLDWQDNHRRRSPLHRAVYFGHFQILKILLAAGANPNVADNHAVTPLHIYDTHARTDDSYTPLHL-----------------AVVYNRIGVTRLLLDASASSLEVRDSFHGITPLAWASKFSFATMLRILLSMGADVNSRSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXDSLDNEGADAGSAIGLGDPPRHKGPQSPPILPGAVNRTGWLKNETLATRIQLALSNARKDRTWRRRGWLVV-LARRQAMAMAVVPGTTSRASKTSVSGNKSDSKMTIPRILATTGVDADTGRRVHLASHQEGTRQGIVRSSSDLPHSNDVPGGWSHGNLGNSVPLQSKGSHNTAIFTSQISESSSMQLGWAGGGSAGHIDKVTGWTPGQGVVQALLGLAAVEVGVFRGVMRYI 629
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BLAST of mRNA_Ecto-sp13_S_contig19854.6442.1 vs. uniprot
Match: D7G7L7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L7_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 3.120e-42
Identity = 76/86 (88.37%), Postives = 81/86 (94.19%), Query Frame = 0 
Query:    1 SSREATRRLLGGDGGGKLVYDYVSMVSQDVATVYGLVQGGAFLDWQDSHRRRTPLHRAVYFGHSQILKILLAAGANPNVADNHAVT 86
            SSREATRRLLGGD GGKLVYDYV+MVSQ+VATVYGLV+GGAFLDWQDSHRRR+PLHRAV FGHSQIL+ILL  GANPNVADN AVT
Sbjct:   75 SSREATRRLLGGDRGGKLVYDYVNMVSQNVATVYGLVKGGAFLDWQDSHRRRSPLHRAVNFGHSQILQILLTTGANPNVADNLAVT 160
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BLAST of mRNA_Ecto-sp13_S_contig19854.6442.1 vs. uniprot
Match: D7G7L8_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L8_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 8.580e-12
Identity = 56/126 (44.44%), Postives = 57/126 (45.24%), Query Frame = 0 
Query:  167 MLRVLLNAGADVNSRSPAGSXXXXXXXXXXXXXXXXXXXXXXXXXDSLDNHGADAGS---------------------------------------LALSRARKDRTWRRRGWLVVVLARRQAMAM 253
            MLRVLLNAGADVNSRS AGS                         D LDN GADAGS                                       LALS+ARKDRTWRRRGWLVV LA RQAMAM
Sbjct:    1 MLRVLLNAGADVNSRSSAGSTPLYWACRLNTADIVECLLLAGADPDYLDNQGADAGSVTGLGDPPRHTGRQSPPILPGAVNETGRLKNEALATRIRLALSKARKDRTWRRRGWLVV-LATRQAMAM 125
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19854.6442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L664_9PHAE9.320e-9255.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7M3_ECTSI2.710e-8779.59Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5L5T2_9PHAE1.630e-8650.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7L7_ECTSI3.120e-4288.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G7L8_ECTSI8.580e-1244.44Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 51..66
score: 37.08
coord: 167..181
score: 37.66
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 50..79
e-value: 2.1E-5
score: 33.9
coord: 116..146
e-value: 0.0072
score: 25.5
coord: 184..213
e-value: 1.6E-5
score: 34.3
coord: 83..112
e-value: 290.0
score: 9.0
coord: 151..180
e-value: 0.6
score: 19.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 50..82
score: 13.758
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 184..216
score: 13.437
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 83..115
score: 8.736
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 151..183
score: 10.499
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 116..142
score: 9.564
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 55..141
e-value: 2.2E-12
score: 47.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 36..216
score: 50.268
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 148..239
e-value: 9.6E-21
score: 75.7
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 22..147
e-value: 5.5E-29
score: 103.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 26..228
NoneNo IPR availablePFAMPF13857Ank_5coord: 171..218
e-value: 4.7E-10
score: 39.5
NoneNo IPR availablePANTHERPTHR24193:SF116ADA2A-CONTAINING COMPLEX COMPONENT 3, ISOFORM Dcoord: 103..179
coord: 29..114
NoneNo IPR availablePANTHERPTHR24193:SF116ADA2A-CONTAINING COMPLEX COMPONENT 3, ISOFORM Dcoord: 154..230
coord: 86..141
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 154..230
coord: 86..141
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 103..179
coord: 29..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19854contigEcto-sp13_S_contig19854:3..1350 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19854.6442.1mRNA_Ecto-sp13_S_contig19854.6442.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19854 3..1350 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19854.6442.1 ID=prot_Ecto-sp13_S_contig19854.6442.1|Name=mRNA_Ecto-sp13_S_contig19854.6442.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=300bp
SSREATRRLLGGDGGGKLVYDYVSMVSQDVATVYGLVQGGAFLDWQDSHR
RRTPLHRAVYFGHSQILKILLAAGANPNVADNHAVTPLHMVAVKGCEAEA
AELLCAGADMHARTNDSYTPLHLAVVYNRIGVTRLLLDASASSLEVHDLC
LGITPLAWASKLSFTTMLRVLLNAGADVNSRSPAGSTPLHWACRFNNADI
VESLLLAGADPDSLDNHGADAGSLALSRARKDRTWRRRGWLVVVLARRQA
MAMALGSTGGDSTRVGSGTGWTPERGAVEILLWLAAMEVGVFRNVMRYV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf