prot_Ecto-sp13_S_contig19842.6436.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19842.6436.1
Unique Nameprot_Ecto-sp13_S_contig19842.6436.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length230
Homology
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: D7G3Q7_ECTSI (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q7_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 7.610e-116
Identity = 183/194 (94.33%), Postives = 187/194 (96.39%), Query Frame = 0
Query:    1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAV---IADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYEAEHGTGDDDXXXXGEGGKESISQIRANEKWTDQPRPIGSAPEDE 191
            ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAV   IADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLR+GFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYEAEHGTGDD XXXX   G+ESISQIRANE+WT+QPRPIGSAPEDE
Sbjct:  135 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKVIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRRGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYEAEHGTGDDXXXXXXXEGRESISQIRANERWTNQPRPIGSAPEDE 328          
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: A0A6H5KZJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZJ4_9PHAE)

HSP 1 Score: 326 bits (836), Expect = 1.520e-110
Identity = 174/191 (91.10%), Postives = 178/191 (93.19%), Query Frame = 0
Query:    1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYEAEHGTGDDDXXXXGEGGKESISQIRANEKWTDQPRPIGSAPEDE 191
            ERQHSVYNALQKVE+ +SLVCIHDAARPLVTKAAVIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTP         QGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYEAEHGTGD  XXXX EGG+ESISQIRANE+WTDQPRPIGSAPEDE
Sbjct:   32 ERQHSVYNALQKVEEDASLVCIHDAARPLVTKAAVIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTP---------QGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYEAEHGTGDXXXXXXXEGGRESISQIRANERWTDQPRPIGSAPEDE 213          
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: A0A835YTP8_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTP8_9STRA)

HSP 1 Score: 214 bits (546), Expect = 3.360e-66
Identity = 108/146 (73.97%), Postives = 129/146 (88.36%), Query Frame = 0
Query:    1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAA---VIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEAR 143
            ERQ+SV+N LQ V +G+S+VCIHDAARPLVTK     V+ DA+E+GAAVLGVPMKATVKES DGQFV RTIDRSRLW+IQTPQV+KP LLR+GF++V  E+ EVTDDVSI+EQLGLPVKLT G+YTNLKLTTP+D+VVA +IL++R
Sbjct:  127 ERQNSVFNGLQAVHEGASVVCIHDAARPLVTKECIYQVLRDAEEHGAAVLGVPMKATVKESEDGQFVLRTIDRSRLWEIQTPQVIKPALLREGFERVEQEKLEVTDDVSIIEQLGLPVKLTMGEYTNLKLTTPDDMVVAEQILKSR 272          
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: A0A7S2V2L3_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2L3_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.500e-61
Identity = 106/151 (70.20%), Postives = 124/151 (82.12%), Query Frame = 0
Query:    1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKA---AVIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYEA 148
            ERQ SV N L  V +G+SLVC+HDAARPLVT      VIADA+E+GAAVLGVPMKATVKESADG+FV RTI RSRLW+IQTPQV+KPDLLR+GF KV  E  EVTDDVSI+E LGLPVK+T G+YTN+KLTTP+D+ VA +IL+ R   +A
Sbjct:  143 ERQDSVCNGLSLVGEGASLVCVHDAARPLVTPENIHQVIADAEEHGAAVLGVPMKATVKESADGEFVLRTIPRSRLWEIQTPQVIKPDLLREGFKKVAEESLEVTDDVSIIEALGLPVKITMGEYTNIKLTTPDDMDVAEQILKVRAEKQA 293          
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: A0A7S2DHR1_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHR1_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.040e-60
Identity = 101/146 (69.18%), Postives = 120/146 (82.19%), Query Frame = 0
Query:    1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAA---VIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEAR 143
            ERQ SV+N LQK+ D + +VCIHDAARPL+T  A   V+ D  E+GAAVLGVPMKATVKES DG+FV RTIDRSRLW+IQTPQV+KP +L  GF +V  E WEVTDDVSIVEQLG+PVKLT G+YTNLKLTTP+D+ VA +I+ +R
Sbjct:  145 ERQDSVFNGLQKINDDAPVVCIHDAARPLITPEAIYKVLRDGIEHGAAVLGVPMKATVKESEDGEFVLRTIDRSRLWEIQTPQVIKPSILMDGFKRVNEEGWEVTDDVSIVEQLGVPVKLTLGEYTNLKLTTPDDMQVAEQIMASR 290          
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: A0A6S9KIB4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KIB4_HETAK)

HSP 1 Score: 194 bits (494), Expect = 4.760e-58
Identity = 104/151 (68.87%), Postives = 121/151 (80.13%), Query Frame = 0
Query:    1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTK---AAVIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYEA 148
            ERQ SV N L  V  G++LV +HDAARPLVT    A V+ADA  +GAAVLGVPMKATVKESADG+FV RTI R+RLW+IQTPQV+KPDLLR+GF KV +E  EVTDDVSI+E LGLPVK+T G+YTNLKLTTP+D+ VA  IL+AR    A
Sbjct:  148 ERQDSVSNGLGAVGAGAALVAVHDAARPLVTPGNIAQVVADARAHGAAVLGVPMKATVKESADGEFVLRTIPRARLWEIQTPQVIKPDLLREGFRKVEAEGLEVTDDVSIIEALGLPVKITMGEYTNLKLTTPDDMDVAESILQAREAAAA 298          
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: F0Y453_AURAN (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y453_AURAN)

HSP 1 Score: 191 bits (486), Expect = 2.920e-57
Identity = 99/146 (67.81%), Postives = 119/146 (81.51%), Query Frame = 0
Query:    1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAA---VIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEAR 143
            ERQ SV + L      ++LVCIHDAARPLVT      VI DA ++GAAVLGVP+KATVKES DG+FV RT+DRSRLW++ TPQV+KP LLR+GFDKV  E  EVTDDVSI+EQLGLPVKLT G+YTNLK+TTP+D+VVA++IL+ R
Sbjct:  115 ERQDSVRSGLDACPADAALVCIHDAARPLVTPEEIFKVIGDARDHGAAVLGVPVKATVKESDDGEFVLRTVDRSRLWEVHTPQVIKPALLREGFDKVAKEGLEVTDDVSIIEQLGLPVKLTLGEYTNLKVTTPDDMVVATQILDQR 260          
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: A0A7S1UCG6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCG6_9STRA)

HSP 1 Score: 188 bits (478), Expect = 6.660e-56
Identity = 100/146 (68.49%), Postives = 115/146 (78.77%), Query Frame = 0
Query:    1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAA---VIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEAR 143
            ERQ SV N L KV DG+SLV +HDAARPLVT A    V+ D  E+GAAVLGVPMKATVKES DG+FV RTI RSRLW+IQTPQV++P LLR+GF KV     EVTDDVSIVEQ+G PVK+T G+YTN+KLTTPED+ +A  IL  R
Sbjct:  126 ERQDSVENGLSKVVDGASLVAVHDAARPLVTPAEIYNVLMDGVEHGAAVLGVPMKATVKESEDGEFVLRTIPRSRLWEIQTPQVIRPALLREGFRKVKELGLEVTDDVSIVEQIGEPVKITVGEYTNIKLTTPEDMQIAESILRER 271          
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: A0A0G4G666_VITBC (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G666_VITBC)

HSP 1 Score: 186 bits (473), Expect = 6.300e-55
Identity = 98/155 (63.23%), Postives = 122/155 (78.71%), Query Frame = 0
Query:    1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAV---IADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYE--AEH 150
            ERQ SV+N LQ + +G S+VCIHD+ARPLVT+  V   I DA+ +GAAV+GVPMKATVKES DGQFV RTI+RSRLW+IQTPQV++P LL++GF  V  +   VTDDVS+VE LG PVKLT G+Y NLK+TTPED+V+A + + AR+  E  AEH
Sbjct:  138 ERQDSVWNGLQAMPEGVSVVCIHDSARPLVTQGTVLQCIRDANTHGAAVVGVPMKATVKESEDGQFVLRTIERSRLWEIQTPQVIQPALLKEGFALVREKSLAVTDDVSLVELLGKPVKLTMGEYENLKITTPEDMVIAEQFMRARQREETAAEH 292          
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: A0A7S2DVQ4_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DVQ4_9EUKA)

HSP 1 Score: 185 bits (470), Expect = 7.520e-55
Identity = 98/147 (66.67%), Postives = 115/147 (78.23%), Query Frame = 0
Query:    1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVIA---DADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARR 144
            ERQ SV N L  +    +LV +HDAARPLVT  A+ A   DA E+GAAVL VPMKATVKESADG+FV RT+ RS+LW+IQTPQ+++P LLR GF+KV  E  EVTDDVSIVE LG PVKLT G+YTNLKLTTPED+V+A  ILE R+
Sbjct:  120 ERQDSVRNGLAALSAECTLVAVHDAARPLVTLDAIGACFCDAAEHGAAVLAVPMKATVKESADGEFVTRTLQRSKLWEIQTPQIIRPQLLRDGFEKVEKESLEVTDDVSIVELLGEPVKLTMGEYTNLKLTTPEDMVIAETILEGRK 266          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3Q7_ECTSI7.610e-11694.332-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
A0A6H5KZJ4_9PHAE1.520e-11091.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YTP8_9STRA3.360e-6673.972-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
A0A7S2V2L3_9STRA1.500e-6170.202-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
A0A7S2DHR1_9STRA1.040e-6069.182-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
A0A6S9KIB4_HETAK4.760e-5868.87Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
F0Y453_AURAN2.920e-5767.812-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
A0A7S1UCG6_9STRA6.660e-5668.49Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A0G4G666_VITBC6.300e-5563.232-C-methyl-D-erythritol 4-phosphate cytidylyltrans... [more]
A0A7S2DVQ4_9EUKA7.520e-5566.67Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 1..145
e-value: 1.0E-46
score: 161.3
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 1..140
IPR034683Cytidylyltransferase IspD/TarIPFAMPF01128IspDcoord: 1..141
e-value: 1.1E-39
score: 136.5
NoneNo IPR availablePANTHERPTHR32125FAMILY NOT NAMEDcoord: 1..144
NoneNo IPR availablePANTHERPTHR32125:SF42-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE, CHLOROPLASTICcoord: 1..144
IPR0182944-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved sitePROSITEPS01295ISPDcoord: 20..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19842contigEcto-sp13_S_contig19842:125..3139 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19842.6436.1mRNA_Ecto-sp13_S_contig19842.6436.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19842 125..3139 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19842.6436.1 ID=prot_Ecto-sp13_S_contig19842.6436.1|Name=mRNA_Ecto-sp13_S_contig19842.6436.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=230bp
ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVIADADEYGAAVLGVP
MKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWE
VTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYEAEH
GTGDDDDDEDGEGGKESISQIRANEKWTDQPRPIGSAPEDEKESISQIRA
NEKWVEGSPESANSYDEPMVNLSKMRANS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR034683IspD/TarI
IPR018294ISPD_synthase_CS