mRNA_Ecto-sp13_S_contig19842.6436.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: D7G3Q7_ECTSI (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q7_ECTSI) HSP 1 Score: 344 bits (882), Expect = 7.610e-116 Identity = 183/194 (94.33%), Postives = 187/194 (96.39%), Query Frame = 1
Query: 1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAV---IADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYEAEHGTGDDDXXXXGEGGKESISQIRANEKWTDQPRPIGSAPEDE 573
ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAV IADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLR+GFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYEAEHGTGDD XXXX G+ESISQIRANE+WT+QPRPIGSAPEDE
Sbjct: 135 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKVIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRRGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYEAEHGTGDDXXXXXXXEGRESISQIRANERWTNQPRPIGSAPEDE 328
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: A0A6H5KZJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZJ4_9PHAE) HSP 1 Score: 326 bits (836), Expect = 1.520e-110 Identity = 174/191 (91.10%), Postives = 178/191 (93.19%), Query Frame = 1
Query: 1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYEAEHGTGDDDXXXXGEGGKESISQIRANEKWTDQPRPIGSAPEDE 573
ERQHSVYNALQKVE+ +SLVCIHDAARPLVTKAAVIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTP QGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYEAEHGTGD XXXX EGG+ESISQIRANE+WTDQPRPIGSAPEDE
Sbjct: 32 ERQHSVYNALQKVEEDASLVCIHDAARPLVTKAAVIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTP---------QGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYEAEHGTGDXXXXXXXEGGRESISQIRANERWTDQPRPIGSAPEDE 213
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: A0A835YTP8_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTP8_9STRA) HSP 1 Score: 214 bits (546), Expect = 3.360e-66 Identity = 108/146 (73.97%), Postives = 129/146 (88.36%), Query Frame = 1
Query: 1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAA---VIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEAR 429
ERQ+SV+N LQ V +G+S+VCIHDAARPLVTK V+ DA+E+GAAVLGVPMKATVKES DGQFV RTIDRSRLW+IQTPQV+KP LLR+GF++V E+ EVTDDVSI+EQLGLPVKLT G+YTNLKLTTP+D+VVA +IL++R
Sbjct: 127 ERQNSVFNGLQAVHEGASVVCIHDAARPLVTKECIYQVLRDAEEHGAAVLGVPMKATVKESEDGQFVLRTIDRSRLWEIQTPQVIKPALLREGFERVEQEKLEVTDDVSIIEQLGLPVKLTMGEYTNLKLTTPDDMVVAEQILKSR 272
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: A0A7S2V2L3_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2L3_9STRA) HSP 1 Score: 203 bits (517), Expect = 1.500e-61 Identity = 106/151 (70.20%), Postives = 124/151 (82.12%), Query Frame = 1
Query: 1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKA---AVIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYEA 444
ERQ SV N L V +G+SLVC+HDAARPLVT VIADA+E+GAAVLGVPMKATVKESADG+FV RTI RSRLW+IQTPQV+KPDLLR+GF KV E EVTDDVSI+E LGLPVK+T G+YTN+KLTTP+D+ VA +IL+ R +A
Sbjct: 143 ERQDSVCNGLSLVGEGASLVCVHDAARPLVTPENIHQVIADAEEHGAAVLGVPMKATVKESADGEFVLRTIPRSRLWEIQTPQVIKPDLLREGFKKVAEESLEVTDDVSIIEALGLPVKITMGEYTNIKLTTPDDMDVAEQILKVRAEKQA 293
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: A0A7S2DHR1_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHR1_9STRA) HSP 1 Score: 201 bits (511), Expect = 1.040e-60 Identity = 101/146 (69.18%), Postives = 120/146 (82.19%), Query Frame = 1
Query: 1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAA---VIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEAR 429
ERQ SV+N LQK+ D + +VCIHDAARPL+T A V+ D E+GAAVLGVPMKATVKES DG+FV RTIDRSRLW+IQTPQV+KP +L GF +V E WEVTDDVSIVEQLG+PVKLT G+YTNLKLTTP+D+ VA +I+ +R
Sbjct: 145 ERQDSVFNGLQKINDDAPVVCIHDAARPLITPEAIYKVLRDGIEHGAAVLGVPMKATVKESEDGEFVLRTIDRSRLWEIQTPQVIKPSILMDGFKRVNEEGWEVTDDVSIVEQLGVPVKLTLGEYTNLKLTTPDDMQVAEQIMASR 290
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: A0A6S9KIB4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KIB4_HETAK) HSP 1 Score: 194 bits (494), Expect = 4.760e-58 Identity = 104/151 (68.87%), Postives = 121/151 (80.13%), Query Frame = 1
Query: 1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTK---AAVIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYEA 444
ERQ SV N L V G++LV +HDAARPLVT A V+ADA +GAAVLGVPMKATVKESADG+FV RTI R+RLW+IQTPQV+KPDLLR+GF KV +E EVTDDVSI+E LGLPVK+T G+YTNLKLTTP+D+ VA IL+AR A
Sbjct: 148 ERQDSVSNGLGAVGAGAALVAVHDAARPLVTPGNIAQVVADARAHGAAVLGVPMKATVKESADGEFVLRTIPRARLWEIQTPQVIKPDLLREGFRKVEAEGLEVTDDVSIIEALGLPVKITMGEYTNLKLTTPDDMDVAESILQAREAAAA 298
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: F0Y453_AURAN (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y453_AURAN) HSP 1 Score: 191 bits (486), Expect = 2.920e-57 Identity = 99/146 (67.81%), Postives = 119/146 (81.51%), Query Frame = 1
Query: 1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAA---VIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEAR 429
ERQ SV + L ++LVCIHDAARPLVT VI DA ++GAAVLGVP+KATVKES DG+FV RT+DRSRLW++ TPQV+KP LLR+GFDKV E EVTDDVSI+EQLGLPVKLT G+YTNLK+TTP+D+VVA++IL+ R
Sbjct: 115 ERQDSVRSGLDACPADAALVCIHDAARPLVTPEEIFKVIGDARDHGAAVLGVPVKATVKESDDGEFVLRTVDRSRLWEVHTPQVIKPALLREGFDKVAKEGLEVTDDVSIIEQLGLPVKLTLGEYTNLKVTTPDDMVVATQILDQR 260
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: A0A7S1UCG6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCG6_9STRA) HSP 1 Score: 188 bits (478), Expect = 6.660e-56 Identity = 100/146 (68.49%), Postives = 115/146 (78.77%), Query Frame = 1
Query: 1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAA---VIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEAR 429
ERQ SV N L KV DG+SLV +HDAARPLVT A V+ D E+GAAVLGVPMKATVKES DG+FV RTI RSRLW+IQTPQV++P LLR+GF KV EVTDDVSIVEQ+G PVK+T G+YTN+KLTTPED+ +A IL R
Sbjct: 126 ERQDSVENGLSKVVDGASLVAVHDAARPLVTPAEIYNVLMDGVEHGAAVLGVPMKATVKESEDGEFVLRTIPRSRLWEIQTPQVIRPALLREGFRKVKELGLEVTDDVSIVEQIGEPVKITVGEYTNIKLTTPEDMQIAESILRER 271
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: A0A0G4G666_VITBC (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G666_VITBC) HSP 1 Score: 186 bits (473), Expect = 6.300e-55 Identity = 98/155 (63.23%), Postives = 122/155 (78.71%), Query Frame = 1
Query: 1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAV---IADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARRLYE--AEH 450
ERQ SV+N LQ + +G S+VCIHD+ARPLVT+ V I DA+ +GAAV+GVPMKATVKES DGQFV RTI+RSRLW+IQTPQV++P LL++GF V + VTDDVS+VE LG PVKLT G+Y NLK+TTPED+V+A + + AR+ E AEH
Sbjct: 138 ERQDSVWNGLQAMPEGVSVVCIHDSARPLVTQGTVLQCIRDANTHGAAVVGVPMKATVKESEDGQFVLRTIERSRLWEIQTPQVIQPALLKEGFALVREKSLAVTDDVSLVELLGKPVKLTMGEYENLKITTPEDMVIAEQFMRARQREETAAEH 292
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Match: A0A7S2DVQ4_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DVQ4_9EUKA) HSP 1 Score: 185 bits (470), Expect = 7.520e-55 Identity = 98/147 (66.67%), Postives = 115/147 (78.23%), Query Frame = 1
Query: 1 ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVIA---DADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRQGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEARR 432
ERQ SV N L + +LV +HDAARPLVT A+ A DA E+GAAVL VPMKATVKESADG+FV RT+ RS+LW+IQTPQ+++P LLR GF+KV E EVTDDVSIVE LG PVKLT G+YTNLKLTTPED+V+A ILE R+
Sbjct: 120 ERQDSVRNGLAALSAECTLVAVHDAARPLVTLDAIGACFCDAAEHGAAVLAVPMKATVKESADGEFVTRTLQRSKLWEIQTPQIIRPQLLRDGFEKVEKESLEVTDDVSIVELLGEPVKLTMGEYTNLKLTTPEDMVIAETILEGRK 266 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19842.6436.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig19842.6436.1 >prot_Ecto-sp13_S_contig19842.6436.1 ID=prot_Ecto-sp13_S_contig19842.6436.1|Name=mRNA_Ecto-sp13_S_contig19842.6436.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=230bp ERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVIADADEYGAAVLGVPback to top mRNA from alignment at Ecto-sp13_S_contig19842:125..3139+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig19842.6436.1 ID=mRNA_Ecto-sp13_S_contig19842.6436.1|Name=mRNA_Ecto-sp13_S_contig19842.6436.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3015bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19842:125..3139+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig19842:125..3139+ >mRNA_Ecto-sp13_S_contig19842.6436.1 ID=mRNA_Ecto-sp13_S_contig19842.6436.1|Name=mRNA_Ecto-sp13_S_contig19842.6436.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=690bp|location=Sequence derived from alignment at Ecto-sp13_S_contig19842:125..3139+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |