prot_Ecto-sp13_S_contig19784.6403.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19784.6403.1
Unique Nameprot_Ecto-sp13_S_contig19784.6403.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length79
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19784.6403.1 vs. uniprot
Match: D7FXP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP0_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 6.130e-47
Identity = 73/79 (92.41%), Postives = 73/79 (92.41%), Query Frame = 0 
Query:    1 MVVIVETGDGGWDTQEEPRDMLVGRVFGGLPNGRLGRHSVKAARSPVDPGTEPSTPCSSFSDLGNINTWETHRTPQTEG 79
            MVVIVETGDGGWDTQEEPRDMLVGRVFGGLPNGRLGRHSVKAARSPVDPGTEPSTPCSSF DLGN N WET R PQ EG
Sbjct:    1 MVVIVETGDGGWDTQEEPRDMLVGRVFGGLPNGRLGRHSVKAARSPVDPGTEPSTPCSSFPDLGNTNKWETPRVPQREG 79
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BLAST of mRNA_Ecto-sp13_S_contig19784.6403.1 vs. uniprot
Match: A0A6H5KH43_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH43_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 1.750e-24
Identity = 48/52 (92.31%), Postives = 50/52 (96.15%), Query Frame = 0 
Query:   22 LVGRVFGGLPNGRLGRHSVKAARSPVDPGTEPSTPCSSFSDLGNINTWETHR 73
            LVGRVFGGLPNGRLGRHSVKAARSPVDPGTEP+TPCSSF DLGN+NTWET R
Sbjct:   12 LVGRVFGGLPNGRLGRHSVKAARSPVDPGTEPATPCSSFQDLGNMNTWETPR 63
[Close]
BLAST of mRNA_Ecto-sp13_S_contig19784.6403.1 vs. uniprot
Match: D7G3B3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3B3_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.550e-17
Identity = 48/87 (55.17%), Postives = 60/87 (68.97%), Query Frame = 0 
Query:    1 MVVIVETGDGGWDTQE--EPRDMLVGRVFGGLPNGRLGRHSVKAARSP------VDPGTEPSTPCSSFSDLGNINTWETHRTPQTEG 79
            MV++ ++GD  WDT+   +PRDML GRVFGGLPNGRLGR S+KA  S       VDP TEPSTP SS +DL + NT+     P++EG
Sbjct:    1 MVIVEDSGD--WDTERKTDPRDMLFGRVFGGLPNGRLGRRSIKAGGSAGNSVLRVDPVTEPSTPSSSSADLTSFNTF-----PRSEG 80
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19784.6403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FXP0_ECTSI6.130e-4792.41Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KH43_9PHAE1.750e-2492.31Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7G3B3_ECTSI1.550e-1755.17Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19784contigEcto-sp13_S_contig19784:1352..3002 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19784.6403.1mRNA_Ecto-sp13_S_contig19784.6403.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19784 1352..3002 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19784.6403.1 ID=prot_Ecto-sp13_S_contig19784.6403.1|Name=mRNA_Ecto-sp13_S_contig19784.6403.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=79bp
MVVIVETGDGGWDTQEEPRDMLVGRVFGGLPNGRLGRHSVKAARSPVDPG
TEPSTPCSSFSDLGNINTWETHRTPQTEG
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