prot_Ecto-sp13_S_contig19766.6394.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19766.6394.1
Unique Nameprot_Ecto-sp13_S_contig19766.6394.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length554
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19766.6394.1 vs. uniprot
Match: D8LCI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI5_ECTSI)

HSP 1 Score: 601 bits (1549), Expect = 1.370e-207
Identity = 423/557 (75.94%), Postives = 434/557 (77.92%), Query Frame = 0 
Query:    1 SFTCRGPLRSSSRNSERRRIQVVLPYGVGSGAAGGXXXXXXXXXXXXXXXXAGAAGTMMSLLDPPNPTALEARLNEDRRMKRGRDLRRERHAFLSRLTQEREERVLLEAWAASTIQALFRGFLARPRPPRPRPRKELTPAESNRRLVADLQAILARAGLPTIPGLGPDGRKASDGTAWGQGRGGATSGHGGGGMAGAGERGLKRSRSRRQRAFEDEMSTHITRVVRGFLERRRFGRRWAVWHRKRRWSSASRIQNCWRAYRKRMGWRELESEATRQQFRRVAVVVQVMDRAAAKIQARWRGVACRMGLARKATDDALWKRRMVSAVTIQVAARRRAAIVRYGSKLTLGAARREREARAAAEXXXXXXXXXXXXXXXXXXXXXXXXXXSATSEGGEAARDRAEPARGGETGRREAAAAVVGMAAVAGSEGGRDKEQRTTAAATRNAGGKGRGA-EASTSKIQLLKLQQEDQQQKHEGPAHGSETGLSNQKAGLSPTGVGSADGSGXXXXTGLCGGLSSDVRKRVSQEAS---LQFVQESIQAAVVSARKHSVEGTGSQ 553
            S T R  + SSSRNSERRRIQVVLPYGVGSGAAGGXXXXXXXXXXXX    AGA GTMMSLLDPPNPTALEARLNE+RR+KRGRDLRRERHAFLSRLTQEREERVLLEAWAASTIQALFRGFLARPRPPRPRPRKELTPAESNRRLVADLQAILARAGLPTIPGLGPDGRK S+GTAWGQGR                          RQRAFEDEMST ITRVVRGFLERRRFGRRWAVW RKRR SSASRIQNCWRAYRKRMGWRELESE              VMDRAAAKIQARWRGVACRMGLARKATDDAL KRRMVSAVTIQ AARRRAAIVRYGSKLTLGAARREREAR+AA XXXXXXXXXXXXXXXXXXXXXXXXX +ATSEGGE+AR RA+PARG ETG REAAA+                              KGRGA    TSKI+LL+LQQEDQQQKH GPAHGSETGLSN K GLSPTGVGSADG  XXXX                       LQFVQESIQAAVVSARKHSVEGTGSQ
Sbjct:  102 SNTTRPVVVSSSRNSERRRIQVVLPYGVGSGAAGGXXXXXXXXXXXXASGRAGATGTMMSLLDPPNPTALEARLNENRRLKRGRDLRRERHAFLSRLTQEREERVLLEAWAASTIQALFRGFLARPRPPRPRPRKELTPAESNRRLVADLQAILARAGLPTIPGLGPDGRKTSEGTAWGQGRXXXXXXXXXXXXXXXXXXXXXXXXXXRQRAFEDEMSTRITRVVRGFLERRRFGRRWAVWDRKRRRSSASRIQNCWRAYRKRMGWRELESE--------------VMDRAAAKIQARWRGVACRMGLARKATDDALGKRRMVSAVTIQAAARRRAAIVRYGSKLTLGAARREREARSAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAATSEGGESARGRAQPARGVETGDREAAASXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXKGRGAARPPTSKIKLLELQQEDQQQKHGGPAHGSETGLSNLKVGLSPTGVGSADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQFVQESIQAAVVSARKHSVEGTGSQ 643
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BLAST of mRNA_Ecto-sp13_S_contig19766.6394.1 vs. uniprot
Match: A0A6H5J9Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Z3_9PHAE)

HSP 1 Score: 344 bits (882), Expect = 4.260e-113
Identity = 191/217 (88.02%), Postives = 195/217 (89.86%), Query Frame = 0 
Query:   58 MMSLLDPPNPTALEARLNEDRRMKRGRDLRRERHAFLSRLTQEREERVLLEAWAASTIQALFRGFLARPRPPRPRPRKELTPAESNRRLVADLQAILARAGLPTIPGLGPDGRKASDGTAWGQGRGGATSGHGGGGMAGAGERGLKRSRSRRQRAFEDEMSTHITRVVRGFLERRRFGRRWAVWHRKRRWSSASRIQNCWRAYRKRMGWRELESEAT 274
            MMSLLDPPNPTALEARLNEDRR KRGR+LR ERHAFLSRLT+EREERVLLEAWAASTIQALFRGFL RPRP RPRPRKELTPAESNRRLVADLQAILARAGLPTIPGLGPDGRKAS+GTAWGQGRG ATS              LKRSRSRRQRAFEDEMST IT VVRGFLERRRFGRRWAVW RKRRWSSASRIQNCWRAYRKRMGWRELESEA+
Sbjct:    1 MMSLLDPPNPTALEARLNEDRRAKRGRNLRLERHAFLSRLTREREERVLLEAWAASTIQALFRGFLTRPRPKRPRPRKELTPAESNRRLVADLQAILARAGLPTIPGLGPDGRKASEGTAWGQGRG-ATSXXXXXXXXXXXXXXLKRSRSRRQRAFEDEMSTRITSVVRGFLERRRFGRRWAVWDRKRRWSSASRIQNCWRAYRKRMGWRELESEAS 216
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19766.6394.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCI5_ECTSI1.370e-20775.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9Z3_9PHAE4.260e-11388.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 213..235
e-value: 46.0
score: 8.2
coord: 245..267
e-value: 57.0
score: 7.4
coord: 287..309
e-value: 2.4
score: 17.1
coord: 107..129
e-value: 39.0
score: 8.8
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 290..305
e-value: 0.25
score: 11.3
coord: 110..125
e-value: 0.0069
score: 16.1
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 288..316
score: 7.272
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 108..136
score: 7.986
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 248..275
score: 6.54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19766contigEcto-sp13_S_contig19766:810..3029 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19766.6394.1mRNA_Ecto-sp13_S_contig19766.6394.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19766 810..3029 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19766.6394.1 ID=prot_Ecto-sp13_S_contig19766.6394.1|Name=mRNA_Ecto-sp13_S_contig19766.6394.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=554bp
SFTCRGPLRSSSRNSERRRIQVVLPYGVGSGAAGGTAGIGGGYRGGRGSG
RAGAAGTMMSLLDPPNPTALEARLNEDRRMKRGRDLRRERHAFLSRLTQE
REERVLLEAWAASTIQALFRGFLARPRPPRPRPRKELTPAESNRRLVADL
QAILARAGLPTIPGLGPDGRKASDGTAWGQGRGGATSGHGGGGMAGAGER
GLKRSRSRRQRAFEDEMSTHITRVVRGFLERRRFGRRWAVWHRKRRWSSA
SRIQNCWRAYRKRMGWRELESEATRQQFRRVAVVVQVMDRAAAKIQARWR
GVACRMGLARKATDDALWKRRMVSAVTIQVAARRRAAIVRYGSKLTLGAA
RREREARAAAEAARPRRRWNRGGGTGGTTGAAAGTAASATSEGGEAARDR
AEPARGGETGRREAAAAVVGMAAVAGSEGGRDKEQRTTAAATRNAGGKGR
GAEASTSKIQLLKLQQEDQQQKHEGPAHGSETGLSNQKAGLSPTGVGSAD
GSGGGGGTGLCGGLSSDVRKRVSQEASLQFVQESIQAAVVSARKHSVEGT
GSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS