prot_Ecto-sp13_S_contig1971.6361.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1971.6361.1
Unique Nameprot_Ecto-sp13_S_contig1971.6361.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length96
Homology
BLAST of mRNA_Ecto-sp13_S_contig1971.6361.1 vs. uniprot
Match: D8LJM9_ECTSI (Brix domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJM9_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 4.040e-64
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0
Query:    1 LGSFFPHEPEFNGRQVVTFHNQRDYIFVRFHRYIFAEGKGEGDTKKTRARLQELGPRFTLKMRWLQEGTFDTQFGEYEWIHKRKEMDSTRRTFHL 95
            LGSFFPHEPEFNGRQVVTFHNQRDYIFVRFHRYIFAEGKGEGDTKKTRARLQELGPRFTLKMRWLQEGTFDTQ+GEYEWIHKRKEMDSTRRTFHL
Sbjct:  213 LGSFFPHEPEFNGRQVVTFHNQRDYIFVRFHRYIFAEGKGEGDTKKTRARLQELGPRFTLKMRWLQEGTFDTQYGEYEWIHKRKEMDSTRRTFHL 307          
BLAST of mRNA_Ecto-sp13_S_contig1971.6361.1 vs. uniprot
Match: A0A7S1CY89_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CY89_CYCTE)

HSP 1 Score: 165 bits (418), Expect = 1.470e-50
Identity = 79/99 (79.80%), Postives = 83/99 (83.84%), Query Frame = 0
Query:    1 LGSFFPHEPEFNGRQVVTFHNQRDYIFVRFHRYIFAEGKGEGDT----KKTRARLQELGPRFTLKMRWLQEGTFDTQFGEYEWIHKRKEMDSTRRTFHL 95
            +GS FPH  +F GRQVVTFHNQRDYIFVR HRYIF EGK   D     KKTRARLQELGPRFTLK+RWLQEGTFDTQFGEYEW HKRKEMD+TRR FHL
Sbjct:   63 MGSLFPHNAQFEGRQVVTFHNQRDYIFVRHHRYIFYEGKQVLDEAKGLKKTRARLQELGPRFTLKLRWLQEGTFDTQFGEYEWFHKRKEMDTTRRRFHL 161          
BLAST of mRNA_Ecto-sp13_S_contig1971.6361.1 vs. uniprot
Match: A0A7S2PK49_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PK49_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.550e-49
Identity = 74/98 (75.51%), Postives = 82/98 (83.67%), Query Frame = 0
Query:    1 LGSFFPHEPEFNGRQVVTFHNQRDYIFVRFHRYIFAEGKG---EGDTKKTRARLQELGPRFTLKMRWLQEGTFDTQFGEYEWIHKRKEMDSTRRTFHL 95
            LGS FPH  +F GRQV TFHNQRD+IFVR HRY+F EG     E   KKT+A+LQELGPRFT+KMRWLQEGTFDTQFGEYEW+HKRKEMD+TRR FHL
Sbjct:    5 LGSLFPHNAQFQGRQVATFHNQRDFIFVRHHRYVFKEGNQVNKETGKKKTKAKLQELGPRFTMKMRWLQEGTFDTQFGEYEWMHKRKEMDTTRRKFHL 102          
BLAST of mRNA_Ecto-sp13_S_contig1971.6361.1 vs. uniprot
Match: K0RZU9_THAOC (Brix domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RZU9_THAOC)

HSP 1 Score: 164 bits (415), Expect = 7.470e-48
Identity = 77/98 (78.57%), Postives = 82/98 (83.67%), Query Frame = 0
Query:    1 LGSFFPHEPEFNGRQVVTFHNQRDYIFVRFHRYIFAEGKG---EGDTKKTRARLQELGPRFTLKMRWLQEGTFDTQFGEYEWIHKRKEMDSTRRTFHL 95
            LGS FPH  +F GRQV TFHNQRD+IFVR HRYIF EGK    E   KKT+ARLQELGPRFT+KMRWLQEGTFDTQFGEYEW HKRKEMD+TRR FHL
Sbjct:  249 LGSLFPHNAQFQGRQVATFHNQRDFIFVRHHRYIFEEGKDTSKETKEKKTKARLQELGPRFTIKMRWLQEGTFDTQFGEYEWFHKRKEMDTTRRKFHL 346          
BLAST of mRNA_Ecto-sp13_S_contig1971.6361.1 vs. uniprot
Match: A0A7S1B3B9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B3B9_9STRA)

HSP 1 Score: 160 bits (405), Expect = 8.770e-47
Identity = 78/97 (80.41%), Postives = 83/97 (85.57%), Query Frame = 0
Query:    1 LGSFFPHE-PEFNGRQVVTFHNQRDYIFVRFHRYIFAEGKG---EGDTKKTRARLQELGPRFTLKMRWLQEGTFDTQFGEYEWIHKRKEMDSTRRTF 93
            LGS FPH+ P+F GRQV TFHNQRD+IFVR HRYIFAEGK    E   KKTRARLQELGPRFTLKMRWLQEG FDT+FGEYEWIHKRKEMD+TRR F
Sbjct:  210 LGSLFPHDAPQFEGRQVATFHNQRDFIFVRHHRYIFAEGKEDNPETGKKKTRARLQELGPRFTLKMRWLQEGVFDTKFGEYEWIHKRKEMDTTRRRF 306          
BLAST of mRNA_Ecto-sp13_S_contig1971.6361.1 vs. uniprot
Match: A0A6U3UYI3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3UYI3_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.740e-46
Identity = 76/98 (77.55%), Postives = 83/98 (84.69%), Query Frame = 0
Query:    1 LGSFFPHEPEFNGRQVVTFHNQRDYIFVRFHRYIFAEGKGEG-DTKK--TRARLQELGPRFTLKMRWLQEGTFDTQFGEYEWIHKRKEMDSTRRTFHL 95
            LGS FPH  +F GRQV TFHNQRD+IFVR HRY+F EGK    +TKK  T+ARLQELGPRFTLKM+WLQEGTFDTQFGEYEW HKRKEMD+TRR FHL
Sbjct:  251 LGSLFPHNAQFKGRQVATFHNQRDFIFVRHHRYVFEEGKETNKETKKPKTKARLQELGPRFTLKMKWLQEGTFDTQFGEYEWFHKRKEMDTTRRKFHL 348          
BLAST of mRNA_Ecto-sp13_S_contig1971.6361.1 vs. uniprot
Match: A0A1E7FDN1_9STRA (Brix-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDN1_9STRA)

HSP 1 Score: 154 bits (388), Expect = 7.290e-46
Identity = 75/110 (68.18%), Postives = 83/110 (75.45%), Query Frame = 0
Query:    1 LGSFFPHEPEFNGRQVVTFHNQRDYIFVRFHRYIFAEGK----------GEGDTKKT-----RARLQELGPRFTLKMRWLQEGTFDTQFGEYEWIHKRKEMDSTRRTFHL 95
            LGS FPH+ EF GRQVVTFHNQRDY+FVR HRY+F E K          GE +   T     +ARLQELGPRFTLK+RW+Q GTFDTQFGEYEWIHKRKEMD+TRR FHL
Sbjct:   62 LGSLFPHDAEFQGRQVVTFHNQRDYVFVRHHRYVFEEKKESMIKKAQKPGEPEKPLTIKDRVKARLQELGPRFTLKLRWIQSGTFDTQFGEYEWIHKRKEMDTTRRRFHL 171          
BLAST of mRNA_Ecto-sp13_S_contig1971.6361.1 vs. uniprot
Match: A0A4D9CX49_9STRA (Brix domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX49_9STRA)

HSP 1 Score: 157 bits (396), Expect = 3.400e-45
Identity = 77/115 (66.96%), Postives = 85/115 (73.91%), Query Frame = 0
Query:    1 LGSFFPHEPEFNGRQVVTFHNQRDYIFVRFHRYIFAEGKGE--------------GDTKKT------RARLQELGPRFTLKMRWLQEGTFDTQFGEYEWIHKRKEMDSTRRTFHL 95
            LGSFFPH PEF GRQVVTFHNQRD++FVR HRY+F E K +              GD  K       RARLQELGPRFTLK+RWLQEGTFDT+FGEYEW+HKRKEMD+TRR FHL
Sbjct:  214 LGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYVFDEKKAKSVPEINNPKKRKSAGDGSKAIAAGGIRARLQELGPRFTLKLRWLQEGTFDTKFGEYEWLHKRKEMDTTRRRFHL 328          
BLAST of mRNA_Ecto-sp13_S_contig1971.6361.1 vs. uniprot
Match: B7FZV9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZV9_PHATC)

HSP 1 Score: 154 bits (389), Expect = 1.480e-44
Identity = 72/95 (75.79%), Postives = 79/95 (83.16%), Query Frame = 0
Query:    1 LGSFFPHEPEFNGRQVVTFHNQRDYIFVRFHRYIFAEGKGEGDTKKTRARLQELGPRFTLKMRWLQEGTFDTQFGEYEWIHKRKEMDSTRRTFHL 95
            LGS FPH+ +F GRQVVTFHNQRDYIFVR HRYIF E +G+         LQELGPRFTLK+RW+QEGTFDTQFGEYEWIHKRKEMD+TRR FHL
Sbjct:  202 LGSVFPHDAQFQGRQVVTFHNQRDYIFVRHHRYIFRELEGKAKD------LQELGPRFTLKLRWIQEGTFDTQFGEYEWIHKRKEMDTTRRKFHL 290          
BLAST of mRNA_Ecto-sp13_S_contig1971.6361.1 vs. uniprot
Match: B8BQI2_THAPS (Brix domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQI2_THAPS)

HSP 1 Score: 151 bits (381), Expect = 2.970e-43
Identity = 72/95 (75.79%), Postives = 77/95 (81.05%), Query Frame = 0
Query:    1 LGSFFPHEPEFNGRQVVTFHNQRDYIFVRFHRYIFAEGKGEGDTKKTRARLQELGPRFTLKMRWLQEGTFDTQFGEYEWIHKRKEMDSTRRTFHL 95
            LGS FPH  +F GRQV TFHNQRD+IFVR HRY        G  KKT+ARLQELGPRFT+KMRWLQEGTFDTQFGEYEW HKRKEMD+TRR FHL
Sbjct:  206 LGSLFPHNAQFQGRQVATFHNQRDFIFVRHHRYEMICCLETGK-KKTKARLQELGPRFTMKMRWLQEGTFDTQFGEYEWFHKRKEMDTTRRKFHL 299          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1971.6361.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJM9_ECTSI4.040e-6498.95Brix domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S1CY89_CYCTE1.470e-5079.80Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2PK49_9STRA1.550e-4975.51Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0RZU9_THAOC7.470e-4878.57Brix domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A7S1B3B9_9STRA8.770e-4780.41Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A6U3UYI3_9STRA1.740e-4677.55Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1E7FDN1_9STRA7.290e-4668.18Brix-domain-containing protein n=1 Tax=Fragilariop... [more]
A0A4D9CX49_9STRA3.400e-4566.96Brix domain-containing protein n=2 Tax=Monodopsida... [more]
B7FZV9_PHATC1.480e-4475.79Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
B8BQI2_THAPS2.970e-4375.79Brix domain-containing protein n=1 Tax=Thalassiosi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007109Brix domainPFAMPF04427Brixcoord: 3..63
e-value: 2.6E-9
score: 37.5
IPR007109Brix domainPROSITEPS50833BRIXcoord: 1..71
score: 16.765
NoneNo IPR availablePANTHERPTHR22734:SF3RIBOSOME PRODUCTION FACTOR 1coord: 2..95
NoneNo IPR availablePANTHERPTHR22734U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4coord: 2..95
NoneNo IPR availableSUPERFAMILY52954Class II aaRS ABD-relatedcoord: 2..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1971contigEcto-sp13_S_contig1971:13418..15138 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1971.6361.1mRNA_Ecto-sp13_S_contig1971.6361.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1971 13418..15138 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1971.6361.1 ID=prot_Ecto-sp13_S_contig1971.6361.1|Name=mRNA_Ecto-sp13_S_contig1971.6361.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=96bp
LGSFFPHEPEFNGRQVVTFHNQRDYIFVRFHRYIFAEGKGEGDTKKTRAR
LQELGPRFTLKMRWLQEGTFDTQFGEYEWIHKRKEMDSTRRTFHL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007109Brix