prot_Ecto-sp13_S_contig1970.6358.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1970.6358.1
Unique Nameprot_Ecto-sp13_S_contig1970.6358.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length810
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1970.6358.1 vs. uniprot
Match: D7G3J2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3J2_ECTSI)

HSP 1 Score: 1316 bits (3407), Expect = 0.000e+0
Identity = 733/779 (94.09%), Postives = 749/779 (96.15%), Query Frame = 0 
Query:    1 MDERKSFDLSSKTASCFSKLRRGADLAPATLELKQTFALRRILLKHGERTEEECSAVRKFLAERTTIWREPFWALLSKREHLKIASCVKLRMVPSDGEPHDFVAADSTSGCMIFSALKGFAQVVQCFDSSGTRLEFQELETFGFLPVPEVLLEEAIRGVERVKSNPRSKVYRGEREYGERRQATTEAGKIRVKIAPDGQYLSINGAEVVPMLKKLAEKRGRSRLMKSMGLELPGMGGDGGFGGEVGXXXXXXXXXXXXXXXRKREVLMREARYGVGSILVHEGASPTMVFVIVEGECRIVKSGKPCSQSQSSGAKVSGGRSARYNLGSAQGSKIDVVLTSGFHTQVDVCQLGSLGPKALIGDIPALLGGVQPASVVAKTPLRVLQCRADRFAAHLEHNARARKVYVEAAKARRSRMTERGGEVEQLVSLAGTPLLVDMSAGSASTSTGPAKHPGGNSAETGDEAAHGSSNT-----RGGETERSTAGGKAAAATVANPTSTDRGRGRVNSRTDPSGTSKASSGKGVGPTVEPVPTHSGGSGHKESMRRSQSTPAATPVEEETRNTGTPADTAATARPATRRTSSSESSPPTRGLNAERIVATASTPQLPCFSLGASPQLAFRGARPSPTVGPQHTPARKAIASSERKVASPVTDALGASASASGDRGRRLGVGVEAGLSGTAAMATPALAAARYQASALLASHLTPFPTITKNRSLHAVAQPIVKHSEGFADACRGERSRSGTEAWRVAREARYESLVAPADRLSIVRQINAGFDALQQ 774
            M+ERKSFDLSSKTASCFSKLRRGADLAPATLELKQTFALRRILLKHGERTEEECSAVRKFLAERTTIWREPFWAL+SKRE LKIASCVKLRMVPSDGEPHDFVAADSTSGCMIFSALKG AQV QCFDSSGTRLEFQELETFGFLPVPEVLLEEAIRGVERVKSNPRSKVYRGEREYGER QATTEAGKIRVKIAPDGQYLSINGAEVVPMLKKLAE RGRSRLMKSMGLELPGMGG+GGFGGEVGXXXXXXXXXXX    RKRE LMREARYGVGSILVHEGASPTMVFVIVEGECRIVKSGKPC QSQSSGAKVSGGRSARYNLGSAQGSK+DVVLTSGFHTQVDVCQLGSLGPKALIGDIPALLGGVQPASVVAKTPLRVLQCRADRFAAHLEHNARARKVYVEAAKARRSRMTERGGEVEQLVSLAGTPLLVDMSAGSASTS+GPAKHP GNSA+TGDEAAHGSSNT     RGGETERSTAGGKAAAAT ANPTSTDRGRGRV+SRTDPSGT+KASSGKG+GP VEPVPTHSGGSGHKESMRRSQSTPAATPVEEETRNTGTPADT ATAR ATRRTSSSESSPPTRGLNAERIVATASTPQLPCFSLG SPQLAFRGARPSPTVGP HTPARKA+ASSERKVASP+TDA+GASASASG R RRLGVGVEAGL+GTAAMATPAL  AR QAS LLASHLTPFPTITKNRSLHAVAQPIVKHSEGFADACRGERSRSGTEAWRVAREARYE LVAPADRLSI++QI+AGFDALQQ
Sbjct:    1 MEERKSFDLSSKTASCFSKLRRGADLAPATLELKQTFALRRILLKHGERTEEECSAVRKFLAERTTIWREPFWALVSKREQLKIASCVKLRMVPSDGEPHDFVAADSTSGCMIFSALKGLAQV-QCFDSSGTRLEFQELETFGFLPVPEVLLEEAIRGVERVKSNPRSKVYRGEREYGERHQATTEAGKIRVKIAPDGQYLSINGAEVVPMLKKLAENRGRSRLMKSMGLELPGMGGEGGFGGEVGXXXXXXXXXXX----RKREALMREARYGVGSILVHEGASPTMVFVIVEGECRIVKSGKPCPQSQSSGAKVSGGRSARYNLGSAQGSKVDVVLTSGFHTQVDVCQLGSLGPKALIGDIPALLGGVQPASVVAKTPLRVLQCRADRFAAHLEHNARARKVYVEAAKARRSRMTERGGEVEQLVSLAGTPLLVDMSAGSASTSSGPAKHPAGNSAQTGDEAAHGSSNTSDRTGRGGETERSTAGGKAAAATAANPTSTDRGRGRVSSRTDPSGTAKASSGKGIGPAVEPVPTHSGGSGHKESMRRSQSTPAATPVEEETRNTGTPADTTATARSATRRTSSSESSPPTRGLNAERIVATASTPQLPCFSLGTSPQLAFRGARPSPTVGPLHTPARKAVASSERKVASPMTDAIGASASASGYRWRRLGVGVEAGLAGTAAMATPALVTARDQASTLLASHLTPFPTITKNRSLHAVAQPIVKHSEGFADACRGERSRSGTEAWRVAREARYEGLVAPADRLSIMQQIDAGFDALQQ 774
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1970.6358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3J2_ECTSI0.000e+094.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 266..423
e-value: 2.3E-11
score: 45.5
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 267..417

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1970contigEcto-sp13_S_contig1970:6397..12854 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1970.6358.1mRNA_Ecto-sp13_S_contig1970.6358.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1970 6232..12876 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1970.6358.1 ID=prot_Ecto-sp13_S_contig1970.6358.1|Name=mRNA_Ecto-sp13_S_contig1970.6358.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=810bp
MDERKSFDLSSKTASCFSKLRRGADLAPATLELKQTFALRRILLKHGERT
EEECSAVRKFLAERTTIWREPFWALLSKREHLKIASCVKLRMVPSDGEPH
DFVAADSTSGCMIFSALKGFAQVVQCFDSSGTRLEFQELETFGFLPVPEV
LLEEAIRGVERVKSNPRSKVYRGEREYGERRQATTEAGKIRVKIAPDGQY
LSINGAEVVPMLKKLAEKRGRSRLMKSMGLELPGMGGDGGFGGEVGGGGG
GGGGGGGGGGGRKREVLMREARYGVGSILVHEGASPTMVFVIVEGECRIV
KSGKPCSQSQSSGAKVSGGRSARYNLGSAQGSKIDVVLTSGFHTQVDVCQ
LGSLGPKALIGDIPALLGGVQPASVVAKTPLRVLQCRADRFAAHLEHNAR
ARKVYVEAAKARRSRMTERGGEVEQLVSLAGTPLLVDMSAGSASTSTGPA
KHPGGNSAETGDEAAHGSSNTRGGETERSTAGGKAAAATVANPTSTDRGR
GRVNSRTDPSGTSKASSGKGVGPTVEPVPTHSGGSGHKESMRRSQSTPAA
TPVEEETRNTGTPADTAATARPATRRTSSSESSPPTRGLNAERIVATAST
PQLPCFSLGASPQLAFRGARPSPTVGPQHTPARKAIASSERKVASPVTDA
LGASASASGDRGRRLGVGVEAGLSGTAAMATPALAAARYQASALLASHLT
PFPTITKNRSLHAVAQPIVKHSEGFADACRGERSRSGTEAWRVAREARYE
SLVAPADRLSIVRQINAGFDALQQASNPTPAPHPPSSHSLSPSARRLRLL
GGGRRRNPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR018490cNMP-bd-like