mRNA_Ecto-sp13_S_contig1970.6358.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1970.6358.1
Unique NamemRNA_Ecto-sp13_S_contig1970.6358.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1970.6358.1 vs. uniprot
Match: D7G3J2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3J2_ECTSI)

HSP 1 Score: 1316 bits (3407), Expect = 0.000e+0
Identity = 733/779 (94.09%), Postives = 749/779 (96.15%), Query Frame = 2 
Query:   23 MDERKSFDLSSKTASCFSKLRRGADLAPATLELKQTFALRRILLKHGERTEEECSAVRKFLAERTTIWREPFWALLSKREHLKIASCVKLRMVPSDGEPHDFVAADSTSGCMIFSALKGFAQVVQCFDSSGTRLEFQELETFGFLPVPEVLLEEAIRGVERVKSNPRSKVYRGEREYGERRQATTEAGKIRVKIAPDGQYLSINGAEVVPMLKKLAEKRGRSRLMKSMGLELPGMGGDGGFGGEVGXXXXXXXXXXXXXXXRKREVLMREARYGVGSILVHEGASPTMVFVIVEGECRIVKSGKPCSQSQSSGAKVSGGRSARYNLGSAQGSKIDVVLTSGFHTQVDVCQLGSLGPKALIGDIPALLGGVQPASVVAKTPLRVLQCRADRFAAHLEHNARARKVYVEAAKARRSRMTERGGEVEQLVSLAGTPLLVDMSAGSASTSTGPAKHPGGNSAETGDEAAHGSSNT-----RGGETERSTAGGKAAAATVANPTSTDRGRGRVNSRTDPSGTSKASSGKGVGPTVEPVPTHSGGSGHKESMRRSQSTPAATPVEEETRNTGTPADTAATARPATRRTSSSESSPPTRGLNAERIVATASTPQLPCFSLGASPQLAFRGARPSPTVGPQHTPARKAIASSERKVASPVTDALGASASASGDRGRRLGVGVEAGLSGTAAMATPALAAARYQASALLASHLTPFPTITKNRSLHAVAQPIVKHSEGFADACRGERSRSGTEAWRVAREARYESLVAPADRLSIVRQINAGFDALQQ 2344
            M+ERKSFDLSSKTASCFSKLRRGADLAPATLELKQTFALRRILLKHGERTEEECSAVRKFLAERTTIWREPFWAL+SKRE LKIASCVKLRMVPSDGEPHDFVAADSTSGCMIFSALKG AQV QCFDSSGTRLEFQELETFGFLPVPEVLLEEAIRGVERVKSNPRSKVYRGEREYGER QATTEAGKIRVKIAPDGQYLSINGAEVVPMLKKLAE RGRSRLMKSMGLELPGMGG+GGFGGEVGXXXXXXXXXXX    RKRE LMREARYGVGSILVHEGASPTMVFVIVEGECRIVKSGKPC QSQSSGAKVSGGRSARYNLGSAQGSK+DVVLTSGFHTQVDVCQLGSLGPKALIGDIPALLGGVQPASVVAKTPLRVLQCRADRFAAHLEHNARARKVYVEAAKARRSRMTERGGEVEQLVSLAGTPLLVDMSAGSASTS+GPAKHP GNSA+TGDEAAHGSSNT     RGGETERSTAGGKAAAAT ANPTSTDRGRGRV+SRTDPSGT+KASSGKG+GP VEPVPTHSGGSGHKESMRRSQSTPAATPVEEETRNTGTPADT ATAR ATRRTSSSESSPPTRGLNAERIVATASTPQLPCFSLG SPQLAFRGARPSPTVGP HTPARKA+ASSERKVASP+TDA+GASASASG R RRLGVGVEAGL+GTAAMATPAL  AR QAS LLASHLTPFPTITKNRSLHAVAQPIVKHSEGFADACRGERSRSGTEAWRVAREARYE LVAPADRLSI++QI+AGFDALQQ
Sbjct:    1 MEERKSFDLSSKTASCFSKLRRGADLAPATLELKQTFALRRILLKHGERTEEECSAVRKFLAERTTIWREPFWALVSKREQLKIASCVKLRMVPSDGEPHDFVAADSTSGCMIFSALKGLAQV-QCFDSSGTRLEFQELETFGFLPVPEVLLEEAIRGVERVKSNPRSKVYRGEREYGERHQATTEAGKIRVKIAPDGQYLSINGAEVVPMLKKLAENRGRSRLMKSMGLELPGMGGEGGFGGEVGXXXXXXXXXXX----RKREALMREARYGVGSILVHEGASPTMVFVIVEGECRIVKSGKPCPQSQSSGAKVSGGRSARYNLGSAQGSKVDVVLTSGFHTQVDVCQLGSLGPKALIGDIPALLGGVQPASVVAKTPLRVLQCRADRFAAHLEHNARARKVYVEAAKARRSRMTERGGEVEQLVSLAGTPLLVDMSAGSASTSSGPAKHPAGNSAQTGDEAAHGSSNTSDRTGRGGETERSTAGGKAAAATAANPTSTDRGRGRVSSRTDPSGTAKASSGKGIGPAVEPVPTHSGGSGHKESMRRSQSTPAATPVEEETRNTGTPADTTATARSATRRTSSSESSPPTRGLNAERIVATASTPQLPCFSLGTSPQLAFRGARPSPTVGPLHTPARKAVASSERKVASPMTDAIGASASASGYRWRRLGVGVEAGLAGTAAMATPALVTARDQASTLLASHLTPFPTITKNRSLHAVAQPIVKHSEGFADACRGERSRSGTEAWRVAREARYEGLVAPADRLSIMQQIDAGFDALQQ 774
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1970.6358.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3J2_ECTSI0.000e+094.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1970contigEcto-sp13_S_contig1970:6232..12876 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score75.1
Seed ortholog evalue1.7e-10
Seed eggNOG ortholog36331.EPrPI00000015079
Model size2617
Hectar predicted targeting categoryother localisation
Exons10
EggNOG free text desc.function. Source PGD
EggNOG OGs1MC3N@121069,2DT2W@1,2S6HA@2759
Cds size2430
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1970.6358.1prot_Ecto-sp13_S_contig1970.6358.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1970 6397..12854 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462994.9748623-UTR-Ecto-sp13_S_contig1970:6231..63961681462994.9748623-UTR-Ecto-sp13_S_contig1970:6231..6396Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1970 6232..6396 -
1681462995.0856721-UTR-Ecto-sp13_S_contig1970:12854..128761681462995.0856721-UTR-Ecto-sp13_S_contig1970:12854..12876Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1970 12855..12876 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462994.9859495-CDS-Ecto-sp13_S_contig1970:6396..65031681462994.9859495-CDS-Ecto-sp13_S_contig1970:6396..6503Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1970 6397..6503 -
1681462994.9956198-CDS-Ecto-sp13_S_contig1970:7459..85721681462994.9956198-CDS-Ecto-sp13_S_contig1970:7459..8572Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1970 7460..8572 -
1681462995.0059419-CDS-Ecto-sp13_S_contig1970:9113..92881681462995.0059419-CDS-Ecto-sp13_S_contig1970:9113..9288Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1970 9114..9288 -
1681462995.01576-CDS-Ecto-sp13_S_contig1970:9690..97881681462995.01576-CDS-Ecto-sp13_S_contig1970:9690..9788Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1970 9691..9788 -
1681462995.025764-CDS-Ecto-sp13_S_contig1970:9996..102711681462995.025764-CDS-Ecto-sp13_S_contig1970:9996..10271Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1970 9997..10271 -
1681462995.0359192-CDS-Ecto-sp13_S_contig1970:10517..106991681462995.0359192-CDS-Ecto-sp13_S_contig1970:10517..10699Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1970 10518..10699 -
1681462995.0456572-CDS-Ecto-sp13_S_contig1970:10962..110731681462995.0456572-CDS-Ecto-sp13_S_contig1970:10962..11073Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1970 10963..11073 -
1681462995.0555363-CDS-Ecto-sp13_S_contig1970:11451..116671681462995.0555363-CDS-Ecto-sp13_S_contig1970:11451..11667Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1970 11452..11667 -
1681462995.0654252-CDS-Ecto-sp13_S_contig1970:12338..124191681462995.0654252-CDS-Ecto-sp13_S_contig1970:12338..12419Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1970 12339..12419 -
1681462995.0756378-CDS-Ecto-sp13_S_contig1970:12782..128541681462995.0756378-CDS-Ecto-sp13_S_contig1970:12782..12854Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1970 12783..12854 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1970.6358.1

>prot_Ecto-sp13_S_contig1970.6358.1 ID=prot_Ecto-sp13_S_contig1970.6358.1|Name=mRNA_Ecto-sp13_S_contig1970.6358.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=810bp
MDERKSFDLSSKTASCFSKLRRGADLAPATLELKQTFALRRILLKHGERT
EEECSAVRKFLAERTTIWREPFWALLSKREHLKIASCVKLRMVPSDGEPH
DFVAADSTSGCMIFSALKGFAQVVQCFDSSGTRLEFQELETFGFLPVPEV
LLEEAIRGVERVKSNPRSKVYRGEREYGERRQATTEAGKIRVKIAPDGQY
LSINGAEVVPMLKKLAEKRGRSRLMKSMGLELPGMGGDGGFGGEVGGGGG
GGGGGGGGGGGRKREVLMREARYGVGSILVHEGASPTMVFVIVEGECRIV
KSGKPCSQSQSSGAKVSGGRSARYNLGSAQGSKIDVVLTSGFHTQVDVCQ
LGSLGPKALIGDIPALLGGVQPASVVAKTPLRVLQCRADRFAAHLEHNAR
ARKVYVEAAKARRSRMTERGGEVEQLVSLAGTPLLVDMSAGSASTSTGPA
KHPGGNSAETGDEAAHGSSNTRGGETERSTAGGKAAAATVANPTSTDRGR
GRVNSRTDPSGTSKASSGKGVGPTVEPVPTHSGGSGHKESMRRSQSTPAA
TPVEEETRNTGTPADTAATARPATRRTSSSESSPPTRGLNAERIVATAST
PQLPCFSLGASPQLAFRGARPSPTVGPQHTPARKAIASSERKVASPVTDA
LGASASASGDRGRRLGVGVEAGLSGTAAMATPALAAARYQASALLASHLT
PFPTITKNRSLHAVAQPIVKHSEGFADACRGERSRSGTEAWRVAREARYE
SLVAPADRLSIVRQINAGFDALQQASNPTPAPHPPSSHSLSPSARRLRLL
GGGRRRNPP*
back to top

mRNA from alignment at Ecto-sp13_S_contig1970:6232..12876-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1970.6358.1 ID=mRNA_Ecto-sp13_S_contig1970.6358.1|Name=mRNA_Ecto-sp13_S_contig1970.6358.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6645bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1970:6232..12876- (Ectocarpus species13 EcNAP12_S_4_19m)
CGAGACGGAAAACCCTCATAAAATGGACGAACGGAAAAGCTTCGATCTCA
GCTCGAAGACGGCGTCCTGTTTCTCCAAGCTTCGACGAGGAGCGGTGAGA
TCATGCAATCATAAGACGATGCCCAGCAAAGAAGTCATGAATCTTCCCGG
TATTCTTGAAGAGAAAAATGTCCTTATCTTGGTCGGCGTCGTATAGGACG
CGCGTCAAGTGCTACCTCTCAGTGTCCGCTGCGACGGAGACCTACAGTAC
AACTTACTGAAACACTACAGCAGTACAGTACCTTGTGCACATATCCCGTA
GACTATACTCTACGTGTTGAAGTCCCAGCGTGTGCGCTGTTTTTCCGCAT
GATCTTCTGCGCAAAGAAGTCTCGCCTCTCACCATATTCTTGTGTTGCAG
GCTTGAAGATAAATATCATCCAGTTTACATGCCACCTCGTGCCACACGTT
TCGATAGGATTTGGCACCCGCAACTCTTGAGCTCAAGCAGACCTTCGCGC
TACGAAGAATCCTACTGAAGCACGGCGAGCGGACAGAGGTGCGTTGATTG
TGTATGTCCCACAAGCACCCCTGTCTAGGCGCAAACCGCGTTAACTCAAA
CAGCATGTCAAGGCACCCGTGATGCTCGGGGACATAGGGACTTGCCCCGC
TGTCCACTTGGCGCGCCCAACGAAGCTGTCCACCCCATAACACTGTTTGT
GTTTTCGCCATCCCATATCGTCTCCCCAAAACCAAAAACCTCAGACCAAA
AACATTCCCCAAAACAAAATAATTAATCAATTATAACAAACGTCCCCTCA
TACATATTATTATATCTTTACTTACCGTCAATTGCACTGAGTAGTGGACA
CCCCGTTATGATCCCAGCGCAGACAGCACGCTTCATGCTTCAGTCACCTC
ATCTTTCTTATCGTAGGGTTGATATAATGGTCACGGCTTGGGACTCTGTA
CAAATGTTTCGGTAAGACAGCAGAACAAATACCATGGATGACGACAGCGA
TCGGTCCTGAAACGGATCGCACATCCAGATTTCCGTCCATACCCTTTCTC
TGTACCAACTATTTTCGGTGTCATCTTCTGGACTCCTATTTCGTTGGAGG
GGGGCTGCCGGCATGAACGGTCGAGTCCCATGCCACCTTGACATAAACCC
CTCCCCCAACCGAAATGGGTGACCCATCTGTTCGCGTGCACGCGGAACTA
AACTGCTAGGAAGAATGCTCAGCCGTACGCAAATTCCTCGCGGAACGTAC
AACGATATGGCGAGAACCATTCTGGGCCCTCCTCTCCAAGAGGGAACACC
TCAAGATCGCCAGTTGTGTCAAGCTGAGGATGGTTCCGAGCGACGGGGAG
CCGCATGACTTCGTTGCGGCGGACTCGACGTCCGGGTGCATGATATTCTC
GGCTCTCAAGGGCTTCGCTCAGGTAGTACACACGCTCAGTCTCCAACCAC
CAGGCATGGTGTGAGTCAAGACCTACAGCAGTAGTTATCAATCGGAGTAG
ACATCCCTGAGCCGTGCAGCACATGGGTTGGGTACCCGTCCAGCAATTGT
GCTTGAAGGAAGTGGGTTACACTTGTCAAACAACGGCCTGCATCTCCGTA
CCATCGTAAGCTCCTACACAAGCACCGAGTCTACTTTGATCTCCTCTGTC
TGATCGTTTGCGGATCCTCCCAGAAAGTTTCGTTCACGCAGGCACAGCCA
CTTGGTAGACTCATGCCTTGAGTGTTGCTCATGTCAGCTGCATAAATCAA
CAATAGGCTTGGCGGAGGCGACACGTGCGCGTCGTTCTTGAATCCTTGCG
CAGGTGCAATGTTTCGATAGCTCCGGCACGCGCCTAGAGTTCCAGGAGCT
GGAAACGTTTGGGTTTCTTCCGGTGCCGGAGGTGCTCTTGGAGGAGGCCA
TTCGCGGCGTGGAGGTGAGCAGAACGAGCCGAACACGTTTCCTCTTTCCT
CTCTGTTGACGTCCAGCGCGTGGCGTAGTTACACATCTGTCGACTTTAGG
AACAAACCTCTGGTGAGAGCATGCTGCAGCGTCTATCGAGCTCACGGTGC
CCTTCGCCTTCCGTCAAAACGGACTGGACGGGTGGACCGTACGAACCGGT
AAATATCGAGGTAATATGTTCAATCATCGTGTCGCCTTGTTGCTGCCCCC
CCTTTTCGGATCGCCACCCGAGAGCAGAGGGTGAAATCGAACCCGAGAAG
CAAAGTCTATCGTGGGGAGCGGGAGTACGGAGAAAGGCGCCAAGCGACAA
CGGAGGCCGGCAAGATCAGGGTCAAGATTGCCCCGGACGGGCAGTACTTG
TCCATAAACGGGGCAGAGGTGGTGCCGATGCTCAAGAAGCTCGCTGAAAA
GCGGGGGAGGTGCGCAGGAGGGAACCTACTGCTGTAGTCGTCATGTCAGT
GCACCCTCAACAAACACAGTCGAGTTACTTCCGCCATTTTTTCGCAAATA
TCTTTGCTGCGTCGCAGCCACGTTGCTGGCTGGACTGTGCCTCCTCAATA
CACATCGCGAAAATCTTCCATCAATACTCTACGTAGCTGAATTTTGAAGG
TTTAGGACGAAAATATTTGGCATCCTTGCGCGACCGTCGTTAATCTCGTT
GCCAGGAGCCGCCTGATGAAGAGCATGGGTCTCGAGCTCCCTGGGATGGG
GGGCGATGGTGGGTTTGGAGGGGAAGTAGGCGGTGGCGGTGGCGGTGGTG
GCGGCGGCGGCGGCGGCGGCGGCGGCAGGAAGCGGGAAGTGCTTATGCGA
GAAGCTCGATACGGGGTTGGTTCGATCCTGGTACACGAAGGGGCTTCTCC
CACGATGGTGTTCGTAATCGTGGAGGGAGAGTGCAGGATCGTCAAGTCTG
GGAAGCCGTGTTCCCAATCCCAGTCGTCTGGTGAGACTCGACAGGGCCGC
CACCATCTAGACGTGAAAAGGTCTAGCACGTCGACGAGCCCCGCCCAACA
GACAAGCCCCGAGCAAAATTCATCGCAGAACCTATCGAAATCTGGTGACA
TTCTGAATCATCCGCCTGGACAAAAGAAGAAACTCCACCATACGCCGAGA
TAAAGATTACACTCAAATTGTTTTTCTATCACATGCAGGCGCGAAGGTGT
CTGGTGGCAGGAGCGCGAGGTACAACCTAGGCAGTGCCCAAGGCAGCAAG
ATCGATGTGGTGCTTACCAGTGGCTTTCACACGCAGGTGCGGAGATTCTC
GACGTTCTCCGAGGTCACCTCTTGTGACCAAGCTGCGATGCGCCATGAAA
AAAGCAGGCGGACCCCGTCATTTAGACGAAGACCAGTCGGATAGACGTCA
GGAGAACTTTAATGACGACTTAGCTACAAGTACGTAGGCAGCATTCCTCG
GCATTCAAGATTCCAGCGAGGTCGCAGCAACTAGGGCATGATCATGTTGT
GCCCATACTCTGGCAGCATGGCGCCCATCGCCACTAACGGATGGATCCGA
GAAGATGAACTCGTTCGTCAGGGAGATAAACAACGCCAACAAAACTTCGC
ACGACGGTGATCGACGCACTACCTGGTCGAAGAGAGGCATGGTTCTTTTC
TATTTTTCCCTCCCTTGACAAACGCCTGCTGCACGCAGGTCGACGTGTGC
CAGCTCGGATCTCTGGGACCAAAGGCCCTCATCGGAGACATCCCCGCCTT
GCTCGGCGGCGTGCAGCCAGCGTCGGTCGTGGCGAAGACGCCCCTGAGAG
TCCTTCAGTGCAGAGCCGACAGGTTCGCTGCCCACTTGGAGCACAATGCC
CGAGCTAGGAAGGGTGAGAAGCCATTGCCTGTACGTTTCAAACGAAGAAG
CAGGCGCAATGCTCAGGCCTGCACGCGAAACGTTCACGACGTTGCAGCTT
ATTCCCAAGTAATGCACGTTGTCGTTGGCTGCTGATTCGGCTGGCTCGCC
CCCACTTTCGAGCGGATCGCGTTTATGAAATCGTAGCCACGAAGGGTCTG
GTTTGAGGGTAGACATAGTGTAACGTTTGGTCGTGGTAAAACTGAAATGT
GACGCTGCAGCGAACGTCCTTTGTGATTATCATCTACCTGTTACTCCGAA
GGAGCTTTCGTGATTGATAGAGCGTCTCCAAAGATTTTCATTTAAAATTA
CGATTCGGAAGGTTTGCATCTGCCGTGTTCGACGATAGGCTAATGATATG
TATCAGACGGGGCGCTTGTTCGCAGGCTAAAAAAACAGCAGTGTTGACGA
CTCAGTCTATCACCATCAACGTTAGTCCGAGGGCAGCACGTCTTCAGGTG
CTCAAATCGCCATAACGTCGGCCACAACGCGTCTTTCTCGCACGCCGCAC
ACAGTGTACGTGGAGGCCGCCAAGGCAAGGAGGTCTAGGATGACGGAGCG
AGGGGGAGAGGTGGAGCAGCTCGTCTCGCTCGCGGGGACCCCGCTGCTCG
TTGACATGAGCGCCGGCAGCGCTAGCACCTCCACCGGCCCCGCCAAACAC
CCAGGAGGAAACTCCGCCGAAACCGGCGACGAAGCTGCCCACGGCAGTAG
CAATACTAGGGGTGGGGAGACAGAAAGATCGACCGCCGGCGGGAAAGCTG
CAGCGGCCACGGTAGCCAATCCTACGTCCACCGACAGAGGCCGAGGACGC
GTTAACAGTCGGACCGATCCATCGGGAACCTCCAAGGCTAGCAGCGGCAA
GGGCGTCGGACCGACGGTTGAACCGGTACCAACGCACAGCGGTGGTAGCG
GCCACAAAGAATCGATGCGGAGGTCGCAGTCGACCCCCGCCGCCACACCC
GTGGAAGAAGAAACCCGCAACACCGGAACCCCCGCGGACACCGCCGCGAC
CGCGAGGCCAGCGACGAGGCGCACTTCATCGTCGGAGTCGTCACCTCCGA
CTCGGGGATTGAACGCCGAGCGGATAGTCGCCACGGCGAGCACCCCGCAG
CTGCCTTGTTTCTCCCTGGGGGCATCGCCACAGCTTGCGTTCCGCGGGGC
GCGACCCAGCCCAACAGTTGGGCCGCAGCACACGCCTGCTCGTAAGGCTA
TCGCTTCTTCCGAACGCAAGGTGGCATCGCCGGTGACCGATGCTCTCGGT
GCGTCGGCAAGTGCATCGGGTGACCGAGGGCGCCGTTTGGGAGTGGGAGT
GGAGGCGGGGCTTTCGGGGACAGCGGCGATGGCAACTCCAGCCCTGGCGG
CGGCCAGATATCAAGCGTCGGCGCTCCTAGCCTCCCACCTGACGCCATTC
CCGACCATCACGAAAAATCGAAGCTTGCACGCCGTGGCGCAGCCCATCGT
GAAGCACAGCGAGGGCTTCGCCGACGCCTGCCGGGGAGAGAGGAGTAGAT
CAGGGACCGAGGCATGGAGGGTGGCGAGAGAGGCGAGGTACGAGAGCCTG
GTCGCCCCGGCGGACCGATTGTCAATCGTGCGGCAAATCAACGCCGGCTT
TGACGCGTTACAACAAGGTGGCAGGAGCAGGAGGGTTCCTCCAGTGGCAT
AGTCTAGAAGAGCAAGAGCGTGGCGTGCCACGGGCAGACCTTGCAAATCG
TCTTGCCTTTTGCGAAAGGCGTACAAGGTCGTTAAGATGCAACATCTCAA
ACCGATGCCGTTCGCGCGGTCTTGAGAGCCGTTCGCTCTGATTTTCTCGT
GGCGAAGAAATGAAACGTATGATGATCTGTGGTGTGGCATCTTATGTGGC
AGATATGATACTTGTAAGCCGTCGTGCTTCATATCGCGCAGGGATCATCA
TTGCCGCGGCTCCGATGTCCGGTTCTCGTAGGCCTCGAGCGGTGTCAATC
CAGGCGTATATCAGCCCCAGAGGATCCCACTACATGGCCGGGCGGGTACA
AGAGAGGGCTTGTTAGGGTTGCGACGTCATTCCATACCTCAACATGAAGT
ACACACGTGTAAGAAGTTTCACGATTCCGCTGGAAGCAAACCTTGAATCA
CCAACTCGTGACTCAAGAATTCTGCTGCTGCACTGCTGTAGTCTCATGAG
ACATGTTGAGGCCGCGAGGCTTGAGGTGTTTCGTCATCCGGCCTCGACCG
TCTGTCGGTCGTTCCCAGAGAGTCGTGTACAGCAGCGAGGTACTGCAGGT
AGTCTGCCGCTTAGCAAGAGGTTGGTGGAGCCTGTGCTAGCACCCAGCGC
TATCGACCGGCTCCCGTGGGAGCCAGCACACAGGCCTGGAGCTTTTATAC
CGCGTGCAAGTCCACTACGGAGCATCTTACTGCTGTCCGCTCTGCCAATG
CGGACAAATATGGATATGCGGACATGCAAGCTATGCGGCATGACCTGTAA
AAACAGATTTAGTCTATAAGTCATATCCCATATCCAATCATAGAATGCAC
GCGGATTTTTTTAATTTGGGGGAGTTGGTGATACGATTTTTTTTCATACT
CGTGCATTTTTTTTTTTGTGTAGCGAGCAACCCAACGCCAGCACCTCACC
CACCATCCTCCCATAGCCTGTCTCCGTCCGCCCGCCGCCTGCGGCTGCTC
GGCGGCGGGCGGAGGAGGAACCCGCCTTAATCGGCAAATATTCACTATGG
GAGCCGTCGAGGGCAGCTCTGGTGCGATGTGTGGAGTGCCTTAGGGAAGG
GCTCCCGATCGTTGTCGGAAAGTTGGCCGGTTCGTCTGAAGCTCATCTCC
ATGCGGGATCTTCCTCACACAACGGGGAACACCATGCGTTACACG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1970:6232..12876-

>mRNA_Ecto-sp13_S_contig1970.6358.1 ID=mRNA_Ecto-sp13_S_contig1970.6358.1|Name=mRNA_Ecto-sp13_S_contig1970.6358.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2430bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1970:6232..12876- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACGAACGGAAAAGCTTCGATCTCAGCTCGAAGACGGCGTCCTGTTT
CTCCAAGCTTCGACGAGGAGCGGATTTGGCACCCGCAACTCTTGAGCTCA
AGCAGACCTTCGCGCTACGAAGAATCCTACTGAAGCACGGCGAGCGGACA
GAGGAAGAATGCTCAGCCGTACGCAAATTCCTCGCGGAACGTACAACGAT
ATGGCGAGAACCATTCTGGGCCCTCCTCTCCAAGAGGGAACACCTCAAGA
TCGCCAGTTGTGTCAAGCTGAGGATGGTTCCGAGCGACGGGGAGCCGCAT
GACTTCGTTGCGGCGGACTCGACGTCCGGGTGCATGATATTCTCGGCTCT
CAAGGGCTTCGCTCAGGTAGTGCAATGTTTCGATAGCTCCGGCACGCGCC
TAGAGTTCCAGGAGCTGGAAACGTTTGGGTTTCTTCCGGTGCCGGAGGTG
CTCTTGGAGGAGGCCATTCGCGGCGTGGAGAGGGTGAAATCGAACCCGAG
AAGCAAAGTCTATCGTGGGGAGCGGGAGTACGGAGAAAGGCGCCAAGCGA
CAACGGAGGCCGGCAAGATCAGGGTCAAGATTGCCCCGGACGGGCAGTAC
TTGTCCATAAACGGGGCAGAGGTGGTGCCGATGCTCAAGAAGCTCGCTGA
AAAGCGGGGGAGGAGCCGCCTGATGAAGAGCATGGGTCTCGAGCTCCCTG
GGATGGGGGGCGATGGTGGGTTTGGAGGGGAAGTAGGCGGTGGCGGTGGC
GGTGGTGGCGGCGGCGGCGGCGGCGGCGGCGGCAGGAAGCGGGAAGTGCT
TATGCGAGAAGCTCGATACGGGGTTGGTTCGATCCTGGTACACGAAGGGG
CTTCTCCCACGATGGTGTTCGTAATCGTGGAGGGAGAGTGCAGGATCGTC
AAGTCTGGGAAGCCGTGTTCCCAATCCCAGTCGTCTGGCGCGAAGGTGTC
TGGTGGCAGGAGCGCGAGGTACAACCTAGGCAGTGCCCAAGGCAGCAAGA
TCGATGTGGTGCTTACCAGTGGCTTTCACACGCAGGTCGACGTGTGCCAG
CTCGGATCTCTGGGACCAAAGGCCCTCATCGGAGACATCCCCGCCTTGCT
CGGCGGCGTGCAGCCAGCGTCGGTCGTGGCGAAGACGCCCCTGAGAGTCC
TTCAGTGCAGAGCCGACAGGTTCGCTGCCCACTTGGAGCACAATGCCCGA
GCTAGGAAGGTGTACGTGGAGGCCGCCAAGGCAAGGAGGTCTAGGATGAC
GGAGCGAGGGGGAGAGGTGGAGCAGCTCGTCTCGCTCGCGGGGACCCCGC
TGCTCGTTGACATGAGCGCCGGCAGCGCTAGCACCTCCACCGGCCCCGCC
AAACACCCAGGAGGAAACTCCGCCGAAACCGGCGACGAAGCTGCCCACGG
CAGTAGCAATACTAGGGGTGGGGAGACAGAAAGATCGACCGCCGGCGGGA
AAGCTGCAGCGGCCACGGTAGCCAATCCTACGTCCACCGACAGAGGCCGA
GGACGCGTTAACAGTCGGACCGATCCATCGGGAACCTCCAAGGCTAGCAG
CGGCAAGGGCGTCGGACCGACGGTTGAACCGGTACCAACGCACAGCGGTG
GTAGCGGCCACAAAGAATCGATGCGGAGGTCGCAGTCGACCCCCGCCGCC
ACACCCGTGGAAGAAGAAACCCGCAACACCGGAACCCCCGCGGACACCGC
CGCGACCGCGAGGCCAGCGACGAGGCGCACTTCATCGTCGGAGTCGTCAC
CTCCGACTCGGGGATTGAACGCCGAGCGGATAGTCGCCACGGCGAGCACC
CCGCAGCTGCCTTGTTTCTCCCTGGGGGCATCGCCACAGCTTGCGTTCCG
CGGGGCGCGACCCAGCCCAACAGTTGGGCCGCAGCACACGCCTGCTCGTA
AGGCTATCGCTTCTTCCGAACGCAAGGTGGCATCGCCGGTGACCGATGCT
CTCGGTGCGTCGGCAAGTGCATCGGGTGACCGAGGGCGCCGTTTGGGAGT
GGGAGTGGAGGCGGGGCTTTCGGGGACAGCGGCGATGGCAACTCCAGCCC
TGGCGGCGGCCAGATATCAAGCGTCGGCGCTCCTAGCCTCCCACCTGACG
CCATTCCCGACCATCACGAAAAATCGAAGCTTGCACGCCGTGGCGCAGCC
CATCGTGAAGCACAGCGAGGGCTTCGCCGACGCCTGCCGGGGAGAGAGGA
GTAGATCAGGGACCGAGGCATGGAGGGTGGCGAGAGAGGCGAGGTACGAG
AGCCTGGTCGCCCCGGCGGACCGATTGTCAATCGTGCGGCAAATCAACGC
CGGCTTTGACGCGTTACAACAAGCGAGCAACCCAACGCCAGCACCTCACC
CACCATCCTCCCATAGCCTGTCTCCGTCCGCCCGCCGCCTGCGGCTGCTC
GGCGGCGGGCGGAGGAGGAACCCGCCTTAA
back to top