prot_Ecto-sp13_S_contig1948.6260.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1948.6260.1
Unique Nameprot_Ecto-sp13_S_contig1948.6260.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length655
Homology
BLAST of mRNA_Ecto-sp13_S_contig1948.6260.1 vs. uniprot
Match: D7G219_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G219_ECTSI)

HSP 1 Score: 764 bits (1974), Expect = 1.230e-254
Identity = 563/657 (85.69%), Postives = 573/657 (87.21%), Query Frame = 0
Query:    1 MGILAAPSSAAAGLDLTRHERSSSFFFCLFWGAFSWCQWIPVDKSLRDAELRGTPSSEASTATGGGGGDAIAAGTKVQVMRGSLTVHEVCAEGMLGLRAAARKRAREKVRMKALMLAAMNRWGGRSLPLGTDRAGQQYLVFPADPQSVYVQPTTADKLQGLLSRGPAVGNGHRDDDRGDGGDVWKVFTGKDAVAGLMLGLSPRLPRERREGGGRLRGDGSAEQVGTTARKWEAVVREVRHSSGXXXXXXXXXXXXXXXXXXXXXXXX-EAWYLVSFRGWGQRFDSRWERASALSSLADGGKKDDATEVEXXXXXXXXXXXXXXXXXXXXXXXVNAGGGTGPGLPPQDDEYLQPKVLQGLEASYHMDKPGRARGLRCSVPSFTTAETESSAQARAKAMILTIQAALPSGARLRARGRFDGGLLQPWITFVQEAKTALELMEAWLLLESSINPRWLESSSKRLFSVLPCYSLALQTATYASVCLRAWVMDHCLQYGRSNANVDDAGMSEIASNMLPHQPPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRRLTKVGDLKGXXXXXXXXXXXXXXXXXXPAGDDPFAVDXXXASQHSGPPSXXXXXXXXXXXXXXXXXXGSG--KRGRPAKKRKVR 654
            MGIL APSSAAA LDLTR                  CQW+PVDKSL DAELRGT  SE STAT GGGGDA A G KVQVMRGSLTVHEVCAEGMLGLRAAARKRAREKVRMKAL LAAMNRWGGRSLPLGTDRAGQQYLVFPADPQSVYVQPTTADKLQGL+SRGP++GN HRDD     GDVWKVFTGKDAVAGLMLGLSPR PR      GRLRGDGSAEQVGT AR+WEA+VREVRHSSGXXXXXXXXXXXXXXXXXXXXXXXX EAWYLVSFRGW +RFD RWERASALS LA GGK D AT+VE XXXXXXXXXXX             AG GTGPGLPPQDDEYLQPKVLQGLEASY MDKPGRARGLRCSVPSFTTAETESSAQ RAKAMILTIQAALPSGARLRARGRFDGGLLQPWIT+VQEA TALELMEAWLLLESSINPRWLESSSKRLFSVLPCYSLALQTATYASVCLRAWVMDHCLQYGRSNANVDDAGMSEIASNMLPHQPPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRRLTKVGDLKGXXXXXXXXXXXXXXXXXX          XXXASQHSGPPS XXXXXXXXXXXXXXXXX     +RGRPAKKRKVR
Sbjct: 1261 MGILTAPSSAAADLDLTR------------------CQWVPVDKSLPDAELRGTTCSEVSTATSGGGGDATANGAKVQVMRGSLTVHEVCAEGMLGLRAAARKRAREKVRMKALTLAAMNRWGGRSLPLGTDRAGQQYLVFPADPQSVYVQPTTADKLQGLMSRGPSIGNDHRDDGXXXXGDVWKVFTGKDAVAGLMLGLSPRCPRGGXXXXGRLRGDGSAEQVGTAAREWEALVREVRHSSGXXXXXXXXXXXXXXXXXXXXXXXXXEAWYLVSFRGWSRRFD-RWERASALSPLAGGGKGD-ATDVEEXXXXXXXXXXXMSPSSG------GAGRGTGPGLPPQDDEYLQPKVLQGLEASYQMDKPGRARGLRCSVPSFTTAETESSAQTRAKAMILTIQAALPSGARLRARGRFDGGLLQPWITYVQEATTALELMEAWLLLESSINPRWLESSSKRLFSVLPCYSLALQTATYASVCLRAWVMDHCLQYGRSNANVDDAGMSEIASNMLPHQPPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRRLTKVGDLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASQHSGPPSPXXXXXXXXXXXXXXXXXXXXXXRRGRPAKKRKVR 1891          
BLAST of mRNA_Ecto-sp13_S_contig1948.6260.1 vs. uniprot
Match: A0A6H5KUC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUC7_9PHAE)

HSP 1 Score: 434 bits (1115), Expect = 5.720e-144
Identity = 348/389 (89.46%), Postives = 352/389 (90.49%), Query Frame = 0
Query:  268 EAWYLVSFRGWGQRFDSRWERASALSSLADGGKKDDATEVEXXXXXXXXXXXXXXXXXXXXXXX--VNAGGGTGPGLPPQDDEYLQPKVLQGLEASYHMDKPGRARGLRCSVPSFTTAETESSAQARAKAMILTIQAALPSGARLRARGRFDGGLLQPWITFVQEAKTALELMEAWLLLESSINPRWLESSSKRLFSVLPCYSLALQTATYASVCLRAWVMDHCLQYGRSNANVDDAGMSEIASNMLPHQPPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRRLTKVGDLKGXXXXXXXXXXXXXXXXXXPAGDDPFAVDXXXASQHSGPPSXXXXXXXXXXXXXXXXXXGSGKRGRPAKKRKVR 654
            EAWYLVSFRGW +RFD RWERASALSSLADGGK D ATEVE     XXXXXXXXXXXX        V A GGTGPGLP Q+DEYLQPKVLQGLEAS+HMDKPGRARGLRCSVPSFTTAETESSAQ RAKAMILTIQAALPSGARLRARGRFDGGLLQPWITFVQEA TALELMEAWLLLESSINPRWLESSSKRLFSVLPCY+LALQTATYASVCLRAWVMDHCLQYGRSNANVDDAGMSEIASNMLPHQPPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  RGRRLTKVGDLKGXXXXXXXXXXXXXXXXXX          XXX  QHSGPPSXXXXXXXXXXXXXXXXX GSGKRGRPAKKRKVR
Sbjct:   23 EAWYLVSFRGWSRRFD-RWERASALSSLADGGKGD-ATEVEGPEKEXXXXXXXXXXXXMSPSSGGAVTARGGTGPGLPRQEDEYLQPKVLQGLEASHHMDKPGRARGLRCSVPSFTTAETESSAQTRAKAMILTIQAALPSGARLRARGRFDGGLLQPWITFVQEATTALELMEAWLLLESSINPRWLESSSKRLFSVLPCYTLALQTATYASVCLRAWVMDHCLQYGRSNANVDDAGMSEIASNMLPHQPPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRGRRLTKVGDLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHSGPPSXXXXXXXXXXXXXXXXXSGSGKRGRPAKKRKVR 409          
BLAST of mRNA_Ecto-sp13_S_contig1948.6260.1 vs. uniprot
Match: A0A6H5KV10_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV10_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 6.560e-73
Identity = 158/265 (59.62%), Postives = 159/265 (60.00%), Query Frame = 0
Query:   79 VMRGSLTVHEVCAEGMLGLRAAARKRAREKVRMKALMLAAMNRWGGRSLPLGTDRAGQQYLVFPADPQSVYVQPTTADKLQGLLSRGPAVGNGHRDDDRGDGGDVWKVFTGKDAVAGLMLGLSPRLPRER----------------------------------------------------------------------------------------------------REGGGRLRGDGSAEQVGTTARKWEAVVREVRHSSG 243
            VMRGSLTVHEVCAEGMLGLRAAARKRAREKVRMKAL LAAMNRWGGRSLPLGTDRAGQQYLVFPADPQSVYVQPTTADKLQGLLSRGPAVGN HRDDDRG GGDVWKVFTGKDAVAGLMLGLSPRLPRER                                                                                                    REGGGR RGDGSA+QVGT AR WEAVVREVRHSSG
Sbjct: 1842 VMRGSLTVHEVCAEGMLGLRAAARKRAREKVRMKALTLAAMNRWGGRSLPLGTDRAGQQYLVFPADPQSVYVQPTTADKLQGLLSRGPAVGNDHRDDDRGGGGDVWKVFTGKDAVAGLMLGLSPRLPRERWLQAALIRHFPEAVEVLRDPSFPRRLAASAERGVSRNHVTEETTPLPSSDTPIKTPSPLTVVVKKQPSSQVFLNKSXXXXXXGEGAKAFAPGEKVWVSRRREGGGRPRGDGSAKQVGTAARTWEAVVREVRHSSG 2106          
BLAST of mRNA_Ecto-sp13_S_contig1948.6260.1 vs. uniprot
Match: A0A836CHE5_9STRA (PHD-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHE5_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.070e-6
Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 0
Query:  378 PSFTTAETESSAQARAKAMILTIQAALPSGARLRARGRFDGGL--LQP--WITFVQEAKTALELMEAWLLLESSINPRWLESSSKRLFSVLPCYSLALQTATYASVCLRAWVMDHCLQYGRS 495
            P+F   +  +S   RA+A +LT++AALP GA       + GGL  L P  W    + A +A ELMEA LLLE S+    +         +LP  S A++  T A+VC+RAW++D  + Y R+
Sbjct: 2601 PAFRRHDLLASGVERARAALLTVEAALPPGA-------WQGGLGGLTPALWRAHARGATSAEELMEACLLLEGSLGGPSIRGGGINDI-ILPPPSAAVRAPTPAAVCMRAWILDRSIVYDRT 2714          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1948.6260.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G219_ECTSI1.230e-25485.69Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KUC7_9PHAE5.720e-14489.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KV10_9PHAE6.560e-7359.62Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CHE5_9STRA3.070e-637.70PHD-type domain-containing protein n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1948contigEcto-sp13_S_contig1948:3340..14467 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1948.6260.1mRNA_Ecto-sp13_S_contig1948.6260.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1948 2240..15049 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1948.6260.1 ID=prot_Ecto-sp13_S_contig1948.6260.1|Name=mRNA_Ecto-sp13_S_contig1948.6260.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=655bp
MGILAAPSSAAAGLDLTRHERSSSFFFCLFWGAFSWCQWIPVDKSLRDAE
LRGTPSSEASTATGGGGGDAIAAGTKVQVMRGSLTVHEVCAEGMLGLRAA
ARKRAREKVRMKALMLAAMNRWGGRSLPLGTDRAGQQYLVFPADPQSVYV
QPTTADKLQGLLSRGPAVGNGHRDDDRGDGGDVWKVFTGKDAVAGLMLGL
SPRLPRERREGGGRLRGDGSAEQVGTTARKWEAVVREVRHSSGGDGGGGG
ASATSGGSASASSSGGGEAWYLVSFRGWGQRFDSRWERASALSSLADGGK
KDDATEVEEPGEEEEEEEEEEERRSPSSGGAVNAGGGTGPGLPPQDDEYL
QPKVLQGLEASYHMDKPGRARGLRCSVPSFTTAETESSAQARAKAMILTI
QAALPSGARLRARGRFDGGLLQPWITFVQEAKTALELMEAWLLLESSINP
RWLESSSKRLFSVLPCYSLALQTATYASVCLRAWVMDHCLQYGRSNANVD
DAGMSEIASNMLPHQPPGRRKKASVVDEEPGGVGGSQSTGPPSSASGSRG
GGASNTASASATTPPSGKRGRRLTKVGDLKGGGGGGGSSSSSGRRASPGP
AGDDPFAVDDDDASQHSGPPSPSRSSASSAGGGDGGGGSGSGKRGRPAKK
RKVR*
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