mRNA_Ecto-sp13_S_contig1948.6260.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1948.6260.1
Unique NamemRNA_Ecto-sp13_S_contig1948.6260.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1948.6260.1 vs. uniprot
Match: D7G219_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G219_ECTSI)

HSP 1 Score: 873 bits (2255), Expect = 1.290e-289
Identity = 622/721 (86.27%), Postives = 635/721 (88.07%), Query Frame = 1
Query:    4 QAARCAFCGDLELSLCSTLVEGPTWEEALDHQLQAQPAAIAAAAATAAAIGDTVQSATKRRIAAMGILAAPSSAAAGLDLTRHERSSSFFFCLFWGAFSWCQWIPVDKSLRDAELRGTPSSEASTATGGGGGDAIAAGTKVQVMRGSLTVHEVCAEGMLGLRAAARKRAREKVRMKALMLAAMNRWGGRSLPLGTDRAGQQYLVFPADPQSVYVQPTTADKLQGLLSRGPAVGNGHRDDDRGDGGDVWKVFTGKDAVAGLMLGLSPRLPRERREGGGRLRGDGSAEQVGTTARKWEAVVREVRHSSGXXXXXXXXXXXXXXXXXXXXXXXX-EAWYLVSFRGWGQRFDSRWERASALSSLADGGKKDDATEVEXXXXXXXXXXXXXXXXXXXXXXXVNAGGGTGPGLPPQDDEYLQPKVLQGLEASYHMDKPGRARGLRCSVPSFTTAETESSAQARAKAMILTIQAALPSGARLRARGRFDGGLLQPWITFVQEAKTALELMEAWLLLESSINPRWLESSSKRLFSVLPCYSLALQTATYASVCLRAWVMDHCLQYGRSNANVDDAGMSEIASNMLPHQPPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRRLTKVGDLKGXXXXXXXXXXXXXXXXXXPAGDDPFAVDXXXASQHSGPPSXXXXXXXXXXXXXXXXXXGSG--KRGRPAKKRKVR 2157
            +AARCAFCGDLELSLCSTLVEG TWEEALDHQLQAQPAAIAAAAATA A+GDTVQ+ATKRRIAAMGIL APSSAAA LDLTR                  CQW+PVDKSL DAELRGT  SE STAT GGGGDA A G KVQVMRGSLTVHEVCAEGMLGLRAAARKRAREKVRMKAL LAAMNRWGGRSLPLGTDRAGQQYLVFPADPQSVYVQPTTADKLQGL+SRGP++GN HRDD     GDVWKVFTGKDAVAGLMLGLSPR PR      GRLRGDGSAEQVGT AR+WEA+VREVRHSSGXXXXXXXXXXXXXXXXXXXXXXXX EAWYLVSFRGW +RFD RWERASALS LA GGK D AT+VE XXXXXXXXXXX             AG GTGPGLPPQDDEYLQPKVLQGLEASY MDKPGRARGLRCSVPSFTTAETESSAQ RAKAMILTIQAALPSGARLRARGRFDGGLLQPWIT+VQEA TALELMEAWLLLESSINPRWLESSSKRLFSVLPCYSLALQTATYASVCLRAWVMDHCLQYGRSNANVDDAGMSEIASNMLPHQPPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRRLTKVGDLKGXXXXXXXXXXXXXXXXXX          XXXASQHSGPPS XXXXXXXXXXXXXXXXX     +RGRPAKKRKVR
Sbjct: 1197 EAARCAFCGDLELSLCSTLVEGSTWEEALDHQLQAQPAAIAAAAATADAVGDTVQAATKRRIAAMGILTAPSSAAADLDLTR------------------CQWVPVDKSLPDAELRGTTCSEVSTATSGGGGDATANGAKVQVMRGSLTVHEVCAEGMLGLRAAARKRAREKVRMKALTLAAMNRWGGRSLPLGTDRAGQQYLVFPADPQSVYVQPTTADKLQGLMSRGPSIGNDHRDDGXXXXGDVWKVFTGKDAVAGLMLGLSPRCPRGGXXXXGRLRGDGSAEQVGTAAREWEALVREVRHSSGXXXXXXXXXXXXXXXXXXXXXXXXXEAWYLVSFRGWSRRFD-RWERASALSPLAGGGKGD-ATDVEEXXXXXXXXXXXMSPSSG------GAGRGTGPGLPPQDDEYLQPKVLQGLEASYQMDKPGRARGLRCSVPSFTTAETESSAQTRAKAMILTIQAALPSGARLRARGRFDGGLLQPWITYVQEATTALELMEAWLLLESSINPRWLESSSKRLFSVLPCYSLALQTATYASVCLRAWVMDHCLQYGRSNANVDDAGMSEIASNMLPHQPPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRRLTKVGDLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASQHSGPPSPXXXXXXXXXXXXXXXXXXXXXXRRGRPAKKRKVR 1891          
BLAST of mRNA_Ecto-sp13_S_contig1948.6260.1 vs. uniprot
Match: A0A6H5KUC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUC7_9PHAE)

HSP 1 Score: 435 bits (1118), Expect = 2.340e-139
Identity = 348/389 (89.46%), Postives = 352/389 (90.49%), Query Frame = 1
Query:  997 EAWYLVSFRGWGQRFDSRWERASALSSLADGGKKDDATEVEXXXXXXXXXXXXXXXXXXXXXXX--VNAGGGTGPGLPPQDDEYLQPKVLQGLEASYHMDKPGRARGLRCSVPSFTTAETESSAQARAKAMILTIQAALPSGARLRARGRFDGGLLQPWITFVQEAKTALELMEAWLLLESSINPRWLESSSKRLFSVLPCYSLALQTATYASVCLRAWVMDHCLQYGRSNANVDDAGMSEIASNMLPHQPPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRRLTKVGDLKGXXXXXXXXXXXXXXXXXXPAGDDPFAVDXXXASQHSGPPSXXXXXXXXXXXXXXXXXXGSGKRGRPAKKRKVR 2157
            EAWYLVSFRGW +RFD RWERASALSSLADGGK D ATEVE     XXXXXXXXXXXX        V A GGTGPGLP Q+DEYLQPKVLQGLEAS+HMDKPGRARGLRCSVPSFTTAETESSAQ RAKAMILTIQAALPSGARLRARGRFDGGLLQPWITFVQEA TALELMEAWLLLESSINPRWLESSSKRLFSVLPCY+LALQTATYASVCLRAWVMDHCLQYGRSNANVDDAGMSEIASNMLPHQPPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  RGRRLTKVGDLKGXXXXXXXXXXXXXXXXXX          XXX  QHSGPPSXXXXXXXXXXXXXXXXX GSGKRGRPAKKRKVR
Sbjct:   23 EAWYLVSFRGWSRRFD-RWERASALSSLADGGKGD-ATEVEGPEKEXXXXXXXXXXXXMSPSSGGAVTARGGTGPGLPRQEDEYLQPKVLQGLEASHHMDKPGRARGLRCSVPSFTTAETESSAQTRAKAMILTIQAALPSGARLRARGRFDGGLLQPWITFVQEATTALELMEAWLLLESSINPRWLESSSKRLFSVLPCYTLALQTATYASVCLRAWVMDHCLQYGRSNANVDDAGMSEIASNMLPHQPPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRGRRLTKVGDLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHSGPPSXXXXXXXXXXXXXXXXXSGSGKRGRPAKKRKVR 409          
BLAST of mRNA_Ecto-sp13_S_contig1948.6260.1 vs. uniprot
Match: A0A6H5KV10_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV10_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 6.250e-102
Identity = 243/446 (54.48%), Postives = 253/446 (56.73%), Query Frame = 1
Query:    4 QAARCAFCGDLELSLCSTLVEGPTWEEALDHQLQAQPAAIAAAAATAAAIGDTVQSATKRRIAAMGILAAPSSAAAGLD----------LTRHERSSSF---------FFCLFWGAFSWCQ-------WIPVDKSLRD------AELRGTP-------SSEASTATGGGGGDAIAAGTKVQVMRGSLTVHEVCAEGMLGLRAAARKRAREKVRMKALMLAAMNRWGGRSLPLGTDRAGQQYLVFPADPQSVYVQPTTADKLQGLLSRGPAVGNGHRDDDRGDGGDVWKVFTGKDAVAGLMLGLSPRLPRER----------------------------------------------------------------------------------------------------REGGGRLRGDGSAEQVGTTARKWEAVVREVRHSSG 924
            +AARCAFCGDLEL+LCSTLVEGPTWEEALDHQLQAQP AIAAAAATA AIGDTVQ+ATKRRIAAMGIL  PSSAAAG            L      S F         F C        C+         P+ K  R+      A++ GT        +SE  T                 VMRGSLTVHEVCAEGMLGLRAAARKRAREKVRMKAL LAAMNRWGGRSLPLGTDRAGQQYLVFPADPQSVYVQPTTADKLQGLLSRGPAVGN HRDDDRG GGDVWKVFTGKDAVAGLMLGLSPRLPRER                                                                                                    REGGGR RGDGSA+QVGT AR WEAVVREVRHSSG
Sbjct: 1681 EAARCAFCGDLELALCSTLVEGPTWEEALDHQLQAQPGAIAAAAATADAIGDTVQAATKRRIAAMGILTPPSSAAAGASGYRSTKAFETLNSENTESPFRMVDSEDDKFKC---DCGIKCEDRVHVVAECPLYKKEREVYVTELAKIDGTYREMFEAWNSEERT-----------------VMRGSLTVHEVCAEGMLGLRAAARKRAREKVRMKALTLAAMNRWGGRSLPLGTDRAGQQYLVFPADPQSVYVQPTTADKLQGLLSRGPAVGNDHRDDDRGGGGDVWKVFTGKDAVAGLMLGLSPRLPRERWLQAALIRHFPEAVEVLRDPSFPRRLAASAERGVSRNHVTEETTPLPSSDTPIKTPSPLTVVVKKQPSSQVFLNKSXXXXXXGEGAKAFAPGEKVWVSRRREGGGRPRGDGSAKQVGTAARTWEAVVREVRHSSG 2106          
BLAST of mRNA_Ecto-sp13_S_contig1948.6260.1 vs. uniprot
Match: A0A836CHE5_9STRA (PHD-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHE5_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 6.400e-6
Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 1
Query: 1327 PSFTTAETESSAQARAKAMILTIQAALPSGARLRARGRFDGGL--LQP--WITFVQEAKTALELMEAWLLLESSINPRWLESSSKRLFSVLPCYSLALQTATYASVCLRAWVMDHCLQYGRS 1680
            P+F   +  +S   RA+A +LT++AALP GA       + GGL  L P  W    + A +A ELMEA LLLE S+    +         +LP  S A++  T A+VC+RAW++D  + Y R+
Sbjct: 2601 PAFRRHDLLASGVERARAALLTVEAALPPGA-------WQGGLGGLTPALWRAHARGATSAEELMEACLLLEGSLGGPSIRGGGINDI-ILPPPSAAVRAPTPAAVCMRAWILDRSIVYDRT 2714          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1948.6260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G219_ECTSI1.290e-28986.27Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KUC7_9PHAE2.340e-13989.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KV10_9PHAE6.250e-10254.48Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CHE5_9STRA6.400e-637.70PHD-type domain-containing protein n=1 Tax=Tribone... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1948contigEcto-sp13_S_contig1948:2240..15049 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score70.1
Seed ortholog evalue4.4e-09
Seed eggNOG ortholog35128.Thaps23207
Model size3260
KEGG koko:K17586
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000166,GO:0000228,GO:0000785,GO:0000790,GO:0000792,GO:0001763,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004402,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005720,GO:0005911,GO:0006139,GO:0006259,GO:0006325,GO:0006355,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0008080,GO:0008150,GO:0008152,GO:0008327,GO:0009314,GO:0009416,GO:0009506,GO:0009628,GO:0009648,GO:0009653,GO:0009791,GO:0009889,GO:0009987,GO:0010016,GO:0010216,GO:0010223,GO:0010228,GO:0010346,GO:0010468,GO:0010556,GO:0016043,GO:0016407,GO:0016410,GO:0016567,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0022414,GO:0030054,GO:0031323,GO:0031326,GO:0031935,GO:0031974,GO:0031981,GO:0032446,GO:0032501,GO:0032502,GO:0033043,GO:0033044,GO:0034212,GO:0034641,GO:0036094,GO:0036211,GO:0042393,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043543,GO:0043565,GO:0043966,GO:0043967,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0046483,GO:0048367,GO:0048573,GO:0048608,GO:0048646,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051128,GO:0051171,GO:0051252,GO:0051276,GO:0055044,GO:0060255,GO:0060968,GO:0061458,GO:0061630,GO:0061659,GO:0061733,GO:0065007,GO:0070013,GO:0070647,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090308,GO:0097159,GO:0140096,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902275,GO:1903506,GO:1905393,GO:2000112,GO:2001141
Exons16
EggNOG free text desc.Chromatin organization modifier domain
EggNOG OGs2CMNF@1,2QQZG@2759,2XASX@2836
Cds size1965
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462987.6874418-UTR-Ecto-sp13_S_contig1948:2239..33391681462987.6874418-UTR-Ecto-sp13_S_contig1948:2239..3339Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1948 2240..3339 -
1681462987.852585-UTR-Ecto-sp13_S_contig1948:14467..145571681462987.852585-UTR-Ecto-sp13_S_contig1948:14467..14557Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1948 14468..14557 -
1681462987.8620486-UTR-Ecto-sp13_S_contig1948:14944..150491681462987.8620486-UTR-Ecto-sp13_S_contig1948:14944..15049Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1948 14945..15049 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462987.700268-CDS-Ecto-sp13_S_contig1948:3339..35791681462987.700268-CDS-Ecto-sp13_S_contig1948:3339..3579Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1948 3340..3579 -
1681462987.7097244-CDS-Ecto-sp13_S_contig1948:3910..40691681462987.7097244-CDS-Ecto-sp13_S_contig1948:3910..4069Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1948 3911..4069 -
1681462987.7187152-CDS-Ecto-sp13_S_contig1948:4541..46251681462987.7187152-CDS-Ecto-sp13_S_contig1948:4541..4625Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1948 4542..4625 -
1681462987.7271798-CDS-Ecto-sp13_S_contig1948:5937..60431681462987.7271798-CDS-Ecto-sp13_S_contig1948:5937..6043Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1948 5938..6043 -
1681462987.7367494-CDS-Ecto-sp13_S_contig1948:6835..70141681462987.7367494-CDS-Ecto-sp13_S_contig1948:6835..7014Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1948 6836..7014 -
1681462987.7471173-CDS-Ecto-sp13_S_contig1948:7554..76981681462987.7471173-CDS-Ecto-sp13_S_contig1948:7554..7698Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1948 7555..7698 -
1681462987.7574635-CDS-Ecto-sp13_S_contig1948:8156..83581681462987.7574635-CDS-Ecto-sp13_S_contig1948:8156..8358Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1948 8157..8358 -
1681462987.7698953-CDS-Ecto-sp13_S_contig1948:8714..88031681462987.7698953-CDS-Ecto-sp13_S_contig1948:8714..8803Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1948 8715..8803 -
1681462987.7867572-CDS-Ecto-sp13_S_contig1948:9512..96051681462987.7867572-CDS-Ecto-sp13_S_contig1948:9512..9605Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1948 9513..9605 -
1681462987.7975242-CDS-Ecto-sp13_S_contig1948:9960..100061681462987.7975242-CDS-Ecto-sp13_S_contig1948:9960..10006Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1948 9961..10006 -
1681462987.80663-CDS-Ecto-sp13_S_contig1948:11015..110831681462987.80663-CDS-Ecto-sp13_S_contig1948:11015..11083Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1948 11016..11083 -
1681462987.8161242-CDS-Ecto-sp13_S_contig1948:12249..124231681462987.8161242-CDS-Ecto-sp13_S_contig1948:12249..12423Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1948 12250..12423 -
1681462987.8259077-CDS-Ecto-sp13_S_contig1948:13197..133501681462987.8259077-CDS-Ecto-sp13_S_contig1948:13197..13350Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1948 13198..13350 -
1681462987.8356059-CDS-Ecto-sp13_S_contig1948:13974..140951681462987.8356059-CDS-Ecto-sp13_S_contig1948:13974..14095Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1948 13975..14095 -
1681462987.8443298-CDS-Ecto-sp13_S_contig1948:14360..144671681462987.8443298-CDS-Ecto-sp13_S_contig1948:14360..14467Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1948 14361..14467 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1948.6260.1prot_Ecto-sp13_S_contig1948.6260.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1948 3340..14467 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1948.6260.1

>prot_Ecto-sp13_S_contig1948.6260.1 ID=prot_Ecto-sp13_S_contig1948.6260.1|Name=mRNA_Ecto-sp13_S_contig1948.6260.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=655bp
MGILAAPSSAAAGLDLTRHERSSSFFFCLFWGAFSWCQWIPVDKSLRDAE
LRGTPSSEASTATGGGGGDAIAAGTKVQVMRGSLTVHEVCAEGMLGLRAA
ARKRAREKVRMKALMLAAMNRWGGRSLPLGTDRAGQQYLVFPADPQSVYV
QPTTADKLQGLLSRGPAVGNGHRDDDRGDGGDVWKVFTGKDAVAGLMLGL
SPRLPRERREGGGRLRGDGSAEQVGTTARKWEAVVREVRHSSGGDGGGGG
ASATSGGSASASSSGGGEAWYLVSFRGWGQRFDSRWERASALSSLADGGK
KDDATEVEEPGEEEEEEEEEEERRSPSSGGAVNAGGGTGPGLPPQDDEYL
QPKVLQGLEASYHMDKPGRARGLRCSVPSFTTAETESSAQARAKAMILTI
QAALPSGARLRARGRFDGGLLQPWITFVQEAKTALELMEAWLLLESSINP
RWLESSSKRLFSVLPCYSLALQTATYASVCLRAWVMDHCLQYGRSNANVD
DAGMSEIASNMLPHQPPGRRKKASVVDEEPGGVGGSQSTGPPSSASGSRG
GGASNTASASATTPPSGKRGRRLTKVGDLKGGGGGGGSSSSSGRRASPGP
AGDDPFAVDDDDASQHSGPPSPSRSSASSAGGGDGGGGSGSGKRGRPAKK
RKVR*
back to top

mRNA from alignment at Ecto-sp13_S_contig1948:2240..15049-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1948.6260.1 ID=mRNA_Ecto-sp13_S_contig1948.6260.1|Name=mRNA_Ecto-sp13_S_contig1948.6260.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=12810bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1948:2240..15049- (Ectocarpus species13 EcNAP12_S_4_19m)
CGCCAGGCTGCTCGGTGCGCCTTTTGCGGCGATCTGGAGCTGTCGCTGTG CTCTACCTTGGTGGAAGGCCCTACCTGGGAAGAGGCCCTGGATCACCAGT TGCAGGTGTGTTTGCGTGTGTTAGTGTGCCGATTGATCGTTGAGAGGTAC GTTTTCCAGGTGGATGTGTTGGGATGTCGATGAAATGCTTGTTCCCGAGT TTTTGGAGCTTGTGTCGTTGGAGAAGATGACATTGGAACACGTGCACGTA CAACTCGATCGTTGGTGGGCTTGTGGAACATGATGCCCTTTTGGGGCGCG GGCAAGAGACGGGAGATCTCTTTGTGCCGTCCACAACTAGTGGTTGCATG GGGATTATTTTTTACTCTTGTTGGCAATTTAGGACGACTGATTTGTATCA CCAGTAGTGGCAATTAGTTAGTTCTGGGGAGACGCCGAGAGCGTAACCCC AACCCGCGCGCGTGACTGATTGATCTTGTACGGGGTCGACAGGCTCAGCC GGCGGCGATCGCGGCCGCCGCCGCCACCGCCGCCGCCATCGGCGACACGG TCCAATCGGCCACCAAGCGCAGGATAGCGGCCATGGGGATCCTCGCCGCC CCATCTTCCGCCGCCGCCGGTTTGGACCTCACCAGGCACGAACGCTCCTC CAGTTTTTTTTTTTGCCTTTTTTGGGGTGCATTTAGTTGGTAGAGAGATT TCTTCATTTGTTTCCGCTGCTGTCGGAACGAGAGTGGTCGAACAACTGCT GTGTGTGTTGTTGCTGGGTACGACTGGCTGGGGTGCATGAGTAGGTGAAG GGTTTTGTGATTTTTTTCCGCTACGATCGGAACGACAGCCGTCGAACGAC TTTGTGGGTCCTTGGGCGGACGGGACTAGAGGAAGGGGTTTCCTGGGGAA ATTGGGGTTTGTTATTCCCGGCTTCACATTATTCTGTTGAAAACCCACCT TCAGGTGCCAGTGGATACCGGTCGACAAAAGCCTTCGAGACGCTGAACTC CGAGGTACGCCTTCTTCCGAGGCCTCCACCGCGACCGGCGGAGGAGGGGG CGACGCGATTGCTGCTGGAACAAAGGTGTGTAGCGCACCACGGCTCGTTC CATGTAGAACACGGAGCCCCCGTTTCGTCCCTCCCCCCTCTCTTGTAGTC GAGCTTTATTTTGTTCACACTGAAACCTAATGCGCTTGAGAGAACTGTTC AAGAGATTGCGCTTCGTTCACACTGGAACATGACGCACTGAAGAGACCTG TTTAGGAGTTTGCGCTTAGTTCAGACGGCCTTTGTAGTGGAGAGACCGGT TGAGGTTGTGCGTTGTTCAGACGACCTTCCCCAGTTAAAAGAGACCGGTG AAGGGGGCTCCGAGCGTGCACACCGGGAGACGCACTGCTCTAGGATGAAA ATTCCGGGGAATGCTTATTTTATTTTATTTTTTCCCTCCTCTTGTTGTGT TGTTGTATGTATCTCGTTTGTCCACTCCCTGCCTTCTCGTCAACGTAGTT AACGTGTCTCACGGTAAAAAAAAATGTGTTGTCTGTCTCTTGTCCTGATC AAGATCGTTTTTGTGGCGGCTTGGTGTGGCTTGGCTCTCGTCAGGCAAAT ATCATGGTGGAAGAGAGCCCGACCCCCTGTCATGTTGTCTTGTCCCTCGT CTTGATCACCATCATCGTTGTTGTGTTGGCTTTGCTTGGCTTTCTCAAGG TGCAGGTCATGCGGGGAAGCTTGACCGTGCACGAGGTGTGCGCTGAAGGG ATGCTCGGCCTGAGAGCCGCCGCGCGCAAGCGCGCGAGGGAGAAGGTTCG GATGAAGGCCCTGATGCTGGCCGCGATGAACCGGTGGGGGGGACGCAGCC TGGTGAGTGTGTGCAGCGGTACCTCTCTTTGCGTCCCCCGCTTCGTTCGT GTCGTTCATGTTGTTGTTGGTGGTGGTGGTCGTTGTGGTTGTGTTGTTGC TGTTGTTGTTGTTGCTGTGGTTGTTGTTGTGGTTGTGGTTGTTGTTGTTG TTGTTGTTATTATTGTTGTTGTTGCTGTTGGTGATGGTGTTGTTGTTGTT GTTGTTGTTGTTGTTGTTGTCGTTGATGTTGTTGATGTTGTTGTTGTGTT TTGTTGCTGCTGGTGTGGTCGCGAATGTTGTTGCTGGTTGCTGTCGTTGC TGTCAACTGTGCTGCTTTGGGCCACGCTCCGCCCTCTAAGCAGCATGTAG TCCCATCTCCTCAATACAACCTCACGCGTATCCTGCAGACGGAGAGAAAA TACAGAGATCCGTGGTCACAACGTTTGTCGCACAGTCGCCAGCCAAGAGC GACGGCGGGACCTGCCGCTAAAGACCACAGACAGGAAGGGAGAAGCATGG TGGTGTCAACCGCAACGAAACGAGCCGAACCGACACCCATACAAATCCGT CGCACGGGCACACAAAGTTCCCGCTCGGGTTCAACAACAACTAAACGCTC TCCCCCGTGACACTTTGTTTGCTCTGCTTCTTGCGAAACGGTACGGTACT CCGTCGTCGTGCAAACATGCGGTATTTCCACACGCTATTAAAAAATCTCT CCTCCAAACGGTCGCCTACTCTGCTTCTGGCGAAACGGTACGGTTTACCG TCAAACACATGGTATATGGTGTGTAGCCTCTCGGGACGGATCGAGCGGGA CAGCAGTACCTGGTCTTCCCCGCCGACCCGCAGAGCGTGTACGTGCAGCC CACCACCGCGGACAAGCTGCAGGGCCTCCTGTCGCGGGGGCCGGCGGTTG GGAATGGCCATCGTGATGACGACCGCGGCGATGGCGGTGATGTGTGGAAG GTGAGGGTGTAGTTTCCGCGCGGGTGGGGGGGGGGGGGGGGGTACTCATG TTTTGGATGCGGTTAGACCATTGACCATACTTCCCGAGAGGTTAGAGCAC AGCACACGGGTATCGTAGTCTTGCGTCTGGTGGGGGATCTTTTAAATGTG GCCGGGTTGTGGACGGACAAGTGTGAGGCTGATGTGTTTTGTCGTGGCGT TGATGTCGTTTTTTTTGTTTCCTCATTTAAACCGATGCCATACGCACTCA AGCGTGGCGCAACCGACAAGCGGCAACCGGCCATGATCTCTTCCCATACG GGATTGGAGCCGCAATCGTGCTGGCCCATGTAGATGCTCGAAGTATGTGT GGGTCCTATTGCAGAGACACGACACTTGGAGCCCCGCTTCACTTTTCGGG TTGGGGGGGGGGGGGGGGGGGGGGGGGGGAAAGGGGGGGGGATGTGGGTT TTTTTTCAAAAATGAAGGGGGTGGAATTTTGAACAAAAAAGGGGGGGGGN NNNNNNNNNTTTTTTTTTTTTTTTTTTGGGGGGGCAGGGGGGGGCGGGGG GGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGCAGTCGAGAAAGGGGCGCGTATGATGGTCTTAGTTCACAACTGAAG TAGGTGGAATCTTGCACAACAAATGGGGTTGGGGTTGGTGTGGTGTCACT GTCTCGTGAAAAGATATTATGGATGGCTCAAGTTCGTGGCGTGAGTCGAA GTTTCCGGGAAGTTGATGATGTCGCCGGACGTCTTGTGGCCAACCCGTGA ACGCACCCTGCACGGGCTAAAAGGTCGATCGTCTCCTCCGCACTACGTGT TACCCAAACAAGTGACCATATGGTTTTAATTGAGTACAACTCGCAACTGA ATGGTCGTTACCTGAATGTCGTGTGAATGTATCATAATGTCCGTACGTAT TTATCTTCTCTTCAACATACCCTGCGCAAGCAAGGTCGATCGTCTCCGTT CCACGTGTCACCCAAGCCCGGTCAGTCAGTACAATTTACAGGTTGCAACT AGGCGGTCGTTCAACTGAACGTCGTTTGAATGTATCATGTGCCCGTTTTT TTTTTTACTTCTGTCATCCATGTAATGTTCATCGTCCGCATGACCGCTGC ATCGCCCGCGCCACAGGTGTTTACCGGGAAGGATGCGGTGGCGGGGCTGA TGCTCGGGCTGAGTCCCAGGCTACCGAGAGAGAGGTGGCTCCAGGCGGCT CTCATTCGCCATTTCCCCGAGGCTGTTGAAGTCTTGAGGGTGGGTCGTCT TCTTTTTTTTTTGTGCGTGCTCGTTTGTGTCAAGAAGTGCGTGCCATCCT GTGCGACCTGCGGCGCGACGGATGATGGTGTTAACAGAGGAAGTGAGGAC GAACTTGAGTATGTTTGGCGTACGGCATGTTGTGTTATGAAACTGCTGTG GGGTGTGGGGGTCACGGGGACTGGACTTCTTTTCTTTGTGTGATGTACCG CCGTGACGCGGTCTACTTTCGGCCTCTCCTTCCTCTATTTCCCCGGCCAT CCACTGATGTTTTTAGGAGGTTAATCGAAATGGGCATGCGGTAGTGGTCT ATATTGCGATACTGTCCCTGCGGATAGGGTGCGAAGATGGAGCAAGACGG GAGGGACATGGGGTTACCGGAACGAAACCCATGGGTCGATGAAACTTGAC ATCTTTCTTTTCCGTGCTGCAAGCTAACCAGTTCGGGAAAAGAAGAGAGG AGGAAAGACGAGAAACGCTTCCCTCCCAGGGGGGTAGAAAACAACGAAGA CGCCCTTGCAAGCTTCACGGGGACCAACAACACAGTCGTCGCAGACGTAG CTGTCGCAGTTTTGGCCAACTTCCCCCCCCCCCCCCCCCCTAAATCCACT CGAACACAAGTGTCCGTCTTTATACATACTCTCTTGCGCCTCGCCCGCTC CTTCCCCCTCCTGTCTCTCAAAATCCGGCTTCCCCCTACAACACTCAGGA CCCATCGTTCCCGCGCCGCCTAGCCGCCTCCGCCGAGCGCGGCGTTAGCA GAAACCCCGTGATGGAAGAAATAACCCCCCTTTCTTCCTCGGGCACCACG ACCAAAACGTCGTCTCCTCTGACGGTGGTGGTGAAGAAGCAGCCGTCGTC GCAAGCTTCCCTGAACAAGAGTAGTAGCTCGGGTGGGGGGGGGGAGGGGG CGGAGACTTTTGCCCCCGGACAAAAGGTGTGGGTTTCCAGGAGGAGGGAG GGGGGGGGGCGTCTTCGCGGCGATGGTTCTGCCGAACAGGTGCGTGTTTT TTTTTTTTTCCGCCCACTGTACCTTTTTTTTGTCCCGTACCCAAGTGTGT GCCTTAGTATTATCCGCTGTACCGTATTTATACTCCCGTACCCCCAAGTG TTTTGAGTGTGTGCTTGAGGGTACTGCTGTTGATTTTGCCGTTCGCGTGT GAACCCAGCCGCCCGTGTCAGCTCAGCTGTGCCTCGATGAATCCCGCTCC CAACTGACGTTCGCGTGGGTAGCCAGCTCAGCTGTACTCTCATTACGTTT GCTGGCGGAAATAATGGCGTCTCTGTCCTCCTTATCTCCTATCTATCCGT GTGCTGCTGTATCTTGGTCTTGGTCTCGATCTGTCTTCCGCCAGGTGGGG ACGACCGCCCGGAAATGGGAGGCGGTTGTGAGGGAGGTACGACACTCATC CGGCGGCGACGGCGGCGGCGGTGGCGCGAGCGCCACGGTGAGCGGTGTTG CGTGTGTACAGCAGTGTGCGTGCTAAGGGTAGGAAGGCGTTTTTGTCGGC CCAACGACGAACCCGACAGGGTGATTTGCCATGATCGATAGATAGTTGGT TGTGGTGGACCCCCGCGCACGCTGTGTGAGTGCCGTGGAAGAAAATGTGC AGGGCACCCGACTGCTGGAGCGTCTCTATTTTTTTACCGAGTCCGAAGGG TGATTGGTTCCGTAGGAGATGCGTGGGTCAAACTCGGGGTCTCGTGTCCG CATTTTGTTTTTTTTCTCGTAGTTTGGGCCAAGCGTATGTTGTTTGGCCC ACGAGGGGAACCACCTGCTCTGGCTCGATGAACCGGAACGTTGTCGGAAC GTTTTTTCAGCGAGACAAGAAGCGAACAGCAACAACGGAAACAAACGAAA AAAGGCCAACATGAACAAAATTTTCTCGCGGGCAATAGAACTCTTGTGTT CTTTTGTGAACAGAGTCTAGGAACATACCGTGTGCTACAGCAGTATCGAA TGTGCTCTGTTTATTGTTTTACGAAAGAGAATCGTGGCGTCCCCATGGCT GATGATGGCACAAACGTATCCCTAGCTCTTGACACCTGCGGTGCACCCCC AAGCTCCGTAACCCTTATGATGGCAATGCTGTACCCCGCCCCACCTTTCC CCCCTCGAAAATCTTGCTGATGTGGAATCGGTTTCTTTCTTTTTAGTCGG GGGGCTCCGCGAGCGCCTCGAGCAGTGGGGGGGGGGAGGCCTGGTACCTG GTGTCCTTCCGGGGCTGGGGTCAGAGGTTCGACAGGTACGCTCTTGAGGG AAAGTTGGTTGTTGGGATGCCACTACTGCTGTTGTCGTGTGGAACACATT GTGACGGAAGGGACGGCAACAGATAAAAAAAAAGTCTGCACGGTTTTGGC ACGTGTCTCTGGCCGCAATCAGTTGTGCTTGTGCTCGTCCGGTGTTTTTT TTTGTGTCTCCATTCCAGCTCCGAACTACGGAATACCAGTGTCTTTTCGA CTCCCTTCCAGCACCATCTATGGAACAATGCAATGCCTCGAACTACTTCA AACGGTGAACGGGGCTTGCTTGTTAGGTCTTCCGACTCATCACCCGCGCA ACACACGAACGAACGAACGAATGAACGAACGAACGAGCGAGCAGGTGGGA GCGGGCCTCCGCCCTCTCGTCCTTGGCCGACGGCGGCAAGAAGGATGACG CCACCGAGGTTGAAGAGCCAGGGGAGGAGGAGGAGGAGGAGGAGGAGGAA GAAGAAAGAAGGTCGCCTTCCTCTGGTGGTGCTGTTAACGCAGGGGGCGG CACGGGGCCAGGGCTCCCGCCTCAAGACGACGAATACCTACAGGTGACAA AACCAACAAACACAAAGAGTAGAGCCGGCCCTGCACTCGCCACCCTTGCT CTCTCGCTTCCGTGTCGTGTCCCCCCTCTGGCCAATGGTCTAACCGCTGA GGCATGAAAAAGCATGAGTTCGCCCTACTCGCCCCTCCCAACCTGAGCCT GCCGTGGACTCCACGCAACACGCACTTACCCTTTGATTAGAAAGTGTTTT GAGTGTTTTTCATTCCGCTAGAATCCTGGCGCCTTGTCATTGGTCAGCCG GTCGATGTTAGTTATGAAAACACACACACCTCTGGGCCTGTAGCGTAGCA CCCAGCGGGACGATAACCTTAACCTCGTCGTTTCACCACCCGCTTGTAGA TGCGTACATCTAAGAAAAAATAGTTTTTGACAAAAAATGTTTGTGTTGGT TCGGTGCGATTGTATGTTTTTCACCCTTCTTCGTGTTGAAACATAAATCA GCCGAAGGTGCTGCAGGGCCTCGAGGCGAGCTACCACATGGACAAGCCCG GCCGAGCGAGGGGCCTACGGTGCAGCGTCCCGTCCTTCACGACCGCGGAG ACGGAGAGCAGCGCACAGGCCAGGGCCAAGGCCATGATCCTCACGGTACG GTACGGTACGGTACGGTCTGTCTGTGTGTGTGTTTGTGTGCTGTGCCTCC TCCAATCAGTGTGTGGGTGTGTTGCGTATTTCCCACGATCCTCACGGTAC GGTCTTGTCTGTGTCTGTGTGTTTGTGTGCTGTGCCTTCCCCATTCAGCG TGTGGATGTGTTGCGTTTTTGCTTGTGGTGGTTGCGGCCTGACCTTCCAC GTCGATCGTAGCAATGGATTCAGAGGCACAGCATAGTAGGAGGTAGCAGA CCCCCTCCCTTTCTCGGCGTCCCTACCGCCGCGCGCACTCTTTTGCTGCT GTTGTAATCTATCCCTCAAGTTCGTCTCAGCTTCGGGGAAATGTCGCACC CGTTATATCCTCCAAGTCTCACGGATTTTTCGTTTCTTTGGGAAATTTTC CGCGTCGCCCCCGCCTCAGCCGAGACTTTCTTCACCCGTCCGTCTCATCC CCGAGTCTCCCATTTTTCTGTGGCTCGGCTAGATTTTTTCGGGAAATTCC CCCCCGCAATGCGTACAAAAAAAAAAAAAATCCAGATCCAGGCGGCCTTG CCAAGCGGTGCGCGTCTCCGAGCAAGGGGCCGGTTCGACGGGGGACTCCT CCAGCCGTGGATCACGTTCGTGCAGGAGGCCAAGACGGCGCTTGAGCTGA TGGAGGCGTGGCTGCTGCTGGAGTCGTCCATCAACCCGAGGTGGCTGGAG TCTTCCTCGAAGAGGTAATAAATGGAGGCATGAATGAATGAATACGTTGT TTGTTTCCGTGGCGCGATTTTTTTCGGATGGCGAACGGTGTCTCAAGAAT TTGAAGAGGTACAGTAGTTAAGGCAGCATGGATGTGTGTTTGGTGTTTGA CTCCAGTTTTTAAGGGTGGGAACCGGTGTCTCAAAGATTCTGCCAGAGTT GGCTGGAGTCGTCCTGCAAGAGGTATTGAAAAGAGGAAGCAAGACAGCAT GCGCGTGTGTTTGTTTCTAGTTTTTTTTTTCGGGTGGGAACCGGTCGGTG TCTCGTGCCTGTGTGTTTTTTTCGGTCCTTTTTTTTAATTCAGTCTCGAG GTAGAGAGTAGTCGACATTCACCCCGATGGAGCACTGATGTTTCCATCGG GACGTGGAGGTTGGGTGAGCCATTCGTGCGTGTTTCTGCCTGCCTCCCTC TCGCTCCTGCTCCTGTAGGCACGAAGTGCTTAAAAACTCACTGTTGTTTG TCATATTTTTCTGATATGCGATATTGTTGATGTTGCTGGCATTGCCCACC AATCTCTGCTCATCTCATCGTGTGGCTTTCAATCCTCCCTTGTCCACTTA TTGTTTCTGCTCTTCTTCTGATGCATTGGTAGTCTTTTCCCTCCACCCCC CCCCCCCCCCCGCCCCTCCGGTCTGCTCTCCTGTCTAACCGTCTGTTTTT CGGCATTCCCCTCTCTCGATCTGCTGTGTTCCTTCCATTTTTGTCACTAC GCCGTGTGTGTTATCTCTGTACAACACACACATGCTTGTTCCCCCTTCGC TCGCAGGCTGTTCAGCGTGCTCCCTTGCTACTCGCTGGCGCTGCAGACGG CGACGTACGCCTCGGTTTGCCTGAGGGCGTGGGTCATGGACCACTGTCTT CAGTACGGAAGGGTATGTATGCACAAGCACAGACAACGCCAATTAACGAA GTTTATCCATCACAGCCGCACGAGAAAAAAAAGAAGCGGTGGCATCATCT TGGCGGTGATGACGCGTGAAAAATTAATTGCGTACATAGGTGCCACCCCT CCTGTCTGCAGTACGCACGAACACAAACGTCAACAACAAATTTATCCGAT ACAGGCACACTAGCAAAAGAAAGCGGTGGCATCATTTTGGTGGTGATGAC AAAAGAAAAACACAGTTGCTACAGAATACAGGCACACGAAAAAGAATGCC GCATCATTTTGGTGGTGAAAGAGTACAGGATACTACCATTCTTTTCCGAC AATACTGTGATGCGCGAGAGATGACGTCGATTGTGGAGGATAAGGGAAGT GTGCACATTGGTTTCTGTTGGTGATAGTCCAAGCTAGATGGATTGACGCC TCTAGCGGTAAGGGGACCGCGAAACACGCCGGGACGGATTTAACCTTGGA AATCATTTGAGACGATCTCGTCAAATCTGACGAAACACTCGACCGATTTT GTATGTAGACGGCTATTTTTGAAACCGCTTGAGACGTTTGGGTGGTCGTT TGGTAGAGCGCCTCGTTCACCTTGTGTGGAGGAACCAAGCTTGTTTTTTC GTTTGTGCTCTCGGAGTTTTAGCGGTGTGAAAGGTTTTTGCCGCCCCGGC GCGTGAGACACGCACCACGCCGTTGTTTGAGAGAGGCGTGCTTTATTGGT GAAGCGTGTGCGGTCGGACGGTAGGAACGGAGATTAGGTGATGTATTTGG GTTAACACTTAGCATTAGCATGCACTACAATTTGTATGGATGGACCAAAA ATGGAATCTCCTTTTCTTATGTACGCACGGAAAAAAAGTTTTTATGTTGG TCATCATCATTGTTGGATATATTGTTGGATGTGCGGACAACCCCAATCAA AGTTTTTCGTGCTTCATCTTTTTAGCTTCACCCGACAGGAGCTTTCGTCC AGCTTCGTTGACCCAAGCCACCTTCCTTCCATTCATGTATCGGAACCTAA GTTTCGGCAAACTTTACGGCATTGGTGGCCCAGCATTACTGTGCTGCCAC GGGGTTGCAGCCAGCCAGCACCGTTGTTTTCGCCGCGACCTTTCTAGTCT GTCCCCTCTGTCTCTCTATTTGTTTGACGCCCGTTCACGGGGACGCCGTC TTTTTTTGTCTGAATCTTGTCTTGTTGTTGCCCTCTCACAAAGAAGACTG CCTGCTTACGATGACCTCACTTTTTTTTTGTGTCCGCCGAACCCTGCTCG TGTGATGGGATGACAATGCTGCAGTCCAACGCGAACGTGGACGATGCGGG CATGTCGGAGATCGCGTCGAACATGCTGCCGCATCAGCCCCCTGGACGGC GCAAGAAGGTGCCAGAACTACTGTACGGCAGAAGAAGCGGTAGACACGGT AGATACCGCCTAGCATGCCGAACGATGAACACATGGAGGAATGCAAGTTA CATACATGAATGTTGTAGGCGGATAATATTATGTGCAATCGCATCGTGCT GACGGACGCGGGGGCAACATGCTGCGCAGAGAAAATTCTTGCACCACGAT ACTTGACGGTGCAGCGTAGACAGAGAATTTCCGACAAAGACAAAAATAAC AGAAAGAACAGGAAACAAGAACCGGAGAACGCCTGATGGAAGGCTAGCGT GAGTCTTCTATCGGATATTTGCGGAACGTTTCCTCTTGTGCCCAGAACGG TAATGTGTTCAAGTGTTACATATGTGCACAGATGGGAAAACTAGCACTGT AAGCCACATTAGACCGCTGCTTTCACGAGACAAACTGAAGAGTAACTGCT GCTGCTGTCTTCCCTTTCGAATGTCGCCAGGCATCTGTTGTCGACGAAGA GCCGGGGGGGGTGGGGGGTTCACAATCCACGGGTCCCCCCTCGTCCGCTT CCGGAAGTCGCGGTGGCGGTGCGAGCAACACTGCCTCGGCGTCGGCGACA ACTCCTCCGTCCGGAAAAAGAGGCCGCCGATTGACAAAGGTACGGACGGA CAGTGCTTCGCTTTCTGCGTCGTATTGATAAAACGTCTTTCTCCCTGCAC CTACCTACCACTTTGGGTTTGCTCCCCCCCCCTGTAGTACGTCCTGCATC GTTTTGATGAAACGTCTTTCTCCCTGCACCTACCTACCACTTTGGGTTTG CTCTCCCCCTTCAAGTCGTCCTGCATCGTTTTGACTAAACGCCTTCTTCA TGCACCTACATACAACTTTGGGTTTGCTTCCCCCTGCAGCACGTCATGTG ACCGCCGCCCCCTTACAACCCACACCCCTTTGGCACAAAAAAACGACCCG TCCGACCCGTAATCATCCAGGTGGGGGACTTGAAAGGCGGCGGCGGAGGA GGAGGGAGTTCATCGTCATCAGGGAGGCGTGCATCCCCGGGGCCGGCGGG AGACGACCCCTTCGCTGTGGATGACGACGATGCTTCCCAGCACAGCGGTC CTCCGTCCCCATCTAGATCATCAGCCTCCAGTGCAGGGGGCGGGGATGGG GGCGGCGGCAGCGGCAGCGGAAAACGAGGACGGCCGGCCAAGAAACGCAA AGTGCGTTGAGACAAGACACAATCACATATAAGGAGTATTGGTTTGCTCG GGTAGGCAGAGAACACGGGGGTGGGTATTTGAATTCCCCACGAAGGTGGC GCCGGCCTTGACAAGCCGTCAGCGTTTGTTGTGAGGAGAGACTGGTTGCT ACTCGAAACGCTAGAAGCTCCTTCCCCCCTCGTCGACGCCCGTGCATGCG CGAGCTAGCCGCGGCGCCCCATCATGGGGCGCAACCGATTTTGGTCTAGA TTATGGTGAAATTAGCGCACGTGTAGGAAAGCTTTTCGGGTGGGTGTTGT GTGTGAATTTGTATTTGCTTGCTTGCTGTGCTGTGCGAGTGTTTCGGCTG CGTTCGCAGCCTACACGGCAGAGGTAACAGTAGAGAGCTCAAGAGGAGAC ACAAAGAAAACGCTGCCGTTGGACAAGTGTTTTTTTAGCCTACAGGCATT GCAGTCTTGAAAGGAAGGGTGACGTGAGGAGGAGGAGGAGAGGTGGCGAA GGCAAAGTGGTGCTGGGTTTTTGTTGGTGTAAGAGGGCGAGAGAGGTGGC CGGGGTGATCGAAATATTGAAATATTGAAGTTTTGTAGCGGAACGATTAG TTCCTCCGCCTTTTCTCGGAGACAATGGGGAAAGGAAGAAAGCTGCTGTC GTGCTGTGCACGGTGAGGCAAGCGCGCGGGGCGGTGCATCCATCCGCGTG AGGGAAACAAGGGCACGGACGTTGGTTCCGTCGTCAATCCCAGGTGACGG AGGGTGGCACAAGCTGCTCTAGAAACACAGCAGCAAGTTCTCAGTTCTTC TTCCAAGAAACAATAAATAGTTCGTAGACTACTAGGAAGACACCTTGCCT TAACGGGGGGGGCGATGGGAAAAAACCCAACACGTTGATTAAAAATCAAT GTAGGGGATGTAATCTATTCTGTAAGGTTTGGGTGCGGTCGTCGGAGGCC AAGATACGTTGAAATGGATCGTCTCTCTCTTTCGAACCGGAAAATATGTC GTGGGCCTTTGCATATACATCCATATTTGCTGTGAAATTTGGGATGGAAA TCCGGAAGTCATTGGGCCCCTCTTGCACATTTTCTTTGCTGTTTGGGATG GAAACTCGGG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1948:2240..15049-

>mRNA_Ecto-sp13_S_contig1948.6260.1 ID=mRNA_Ecto-sp13_S_contig1948.6260.1|Name=mRNA_Ecto-sp13_S_contig1948.6260.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1965bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1948:2240..15049- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGATCCTCGCCGCCCCATCTTCCGCCGCCGCCGGTTTGGACCTCAC
CAGGCACGAACGCTCCTCCAGTTTTTTTTTTTGCCTTTTTTGGGGTGCAT
TTAGTTGGTGCCAGTGGATACCGGTCGACAAAAGCCTTCGAGACGCTGAA
CTCCGAGGTACGCCTTCTTCCGAGGCCTCCACCGCGACCGGCGGAGGAGG
GGGCGACGCGATTGCTGCTGGAACAAAGGTGCAGGTCATGCGGGGAAGCT
TGACCGTGCACGAGGTGTGCGCTGAAGGGATGCTCGGCCTGAGAGCCGCC
GCGCGCAAGCGCGCGAGGGAGAAGGTTCGGATGAAGGCCCTGATGCTGGC
CGCGATGAACCGGTGGGGGGGACGCAGCCTGCCTCTCGGGACGGATCGAG
CGGGACAGCAGTACCTGGTCTTCCCCGCCGACCCGCAGAGCGTGTACGTG
CAGCCCACCACCGCGGACAAGCTGCAGGGCCTCCTGTCGCGGGGGCCGGC
GGTTGGGAATGGCCATCGTGATGACGACCGCGGCGATGGCGGTGATGTGT
GGAAGGTGTTTACCGGGAAGGATGCGGTGGCGGGGCTGATGCTCGGGCTG
AGTCCCAGGCTACCGAGAGAGAGGAGGGAGGGGGGGGGGCGTCTTCGCGG
CGATGGTTCTGCCGAACAGGTGGGGACGACCGCCCGGAAATGGGAGGCGG
TTGTGAGGGAGGTACGACACTCATCCGGCGGCGACGGCGGCGGCGGTGGC
GCGAGCGCCACGTCGGGGGGCTCCGCGAGCGCCTCGAGCAGTGGGGGGGG
GGAGGCCTGGTACCTGGTGTCCTTCCGGGGCTGGGGTCAGAGGTTCGACA
GCAGGTGGGAGCGGGCCTCCGCCCTCTCGTCCTTGGCCGACGGCGGCAAG
AAGGATGACGCCACCGAGGTTGAAGAGCCAGGGGAGGAGGAGGAGGAGGA
GGAGGAGGAAGAAGAAAGAAGGTCGCCTTCCTCTGGTGGTGCTGTTAACG
CAGGGGGCGGCACGGGGCCAGGGCTCCCGCCTCAAGACGACGAATACCTA
CAGCCGAAGGTGCTGCAGGGCCTCGAGGCGAGCTACCACATGGACAAGCC
CGGCCGAGCGAGGGGCCTACGGTGCAGCGTCCCGTCCTTCACGACCGCGG
AGACGGAGAGCAGCGCACAGGCCAGGGCCAAGGCCATGATCCTCACGATC
CAGGCGGCCTTGCCAAGCGGTGCGCGTCTCCGAGCAAGGGGCCGGTTCGA
CGGGGGACTCCTCCAGCCGTGGATCACGTTCGTGCAGGAGGCCAAGACGG
CGCTTGAGCTGATGGAGGCGTGGCTGCTGCTGGAGTCGTCCATCAACCCG
AGGTGGCTGGAGTCTTCCTCGAAGAGGCTGTTCAGCGTGCTCCCTTGCTA
CTCGCTGGCGCTGCAGACGGCGACGTACGCCTCGGTTTGCCTGAGGGCGT
GGGTCATGGACCACTGTCTTCAGTACGGAAGGTCCAACGCGAACGTGGAC
GATGCGGGCATGTCGGAGATCGCGTCGAACATGCTGCCGCATCAGCCCCC
TGGACGGCGCAAGAAGGCATCTGTTGTCGACGAAGAGCCGGGGGGGGTGG
GGGGTTCACAATCCACGGGTCCCCCCTCGTCCGCTTCCGGAAGTCGCGGT
GGCGGTGCGAGCAACACTGCCTCGGCGTCGGCGACAACTCCTCCGTCCGG
AAAAAGAGGCCGCCGATTGACAAAGGTGGGGGACTTGAAAGGCGGCGGCG
GAGGAGGAGGGAGTTCATCGTCATCAGGGAGGCGTGCATCCCCGGGGCCG
GCGGGAGACGACCCCTTCGCTGTGGATGACGACGATGCTTCCCAGCACAG
CGGTCCTCCGTCCCCATCTAGATCATCAGCCTCCAGTGCAGGGGGCGGGG
ATGGGGGCGGCGGCAGCGGCAGCGGAAAACGAGGACGGCCGGCCAAGAAA
CGCAAAGTGCGTTGA
back to top