prot_Ecto-sp13_S_contig19469.6256.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19469.6256.1
Unique Nameprot_Ecto-sp13_S_contig19469.6256.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length139
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19469.6256.1 vs. uniprot
Match: D8LNL6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNL6_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 1.470e-78
Identity = 125/134 (93.28%), Postives = 128/134 (95.52%), Query Frame = 0 
Query:    1 WTEQEEKLLNKLIMDRMERGEDMSETMLTGDEEVDVPWAEVARIIKSRNRIACRKKWDYLQMQRRQKWQYVRDKSGSAASVNLAFVKAIIDTGAADESELNWSSLPYPRANLKWKNLRERELQAPNANLQFREV 134
            WTEQEEKLLNKL+MDRME GEDMSE MLTG+EEVDVPWAEVARIIKSRNRIACRKKWDYLQMQRRQKWQYVRD  GSAAS+NLAFVKAII TGAADESELNWSSLPYPRANLKWKNLRERELQAPNANLQFRE 
Sbjct:  126 WTEQEEKLLNKLMMDRMECGEDMSEVMLTGNEEVDVPWAEVARIIKSRNRIACRKKWDYLQMQRRQKWQYVRDTRGSAASINLAFVKAIIGTGAADESELNWSSLPYPRANLKWKNLRERELQAPNANLQFREA 259
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BLAST of mRNA_Ecto-sp13_S_contig19469.6256.1 vs. uniprot
Match: A0A6H5K2Z7_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Z7_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 2.000e-78
Identity = 127/134 (94.78%), Postives = 128/134 (95.52%), Query Frame = 0 
Query:    1 WTEQEEKLLNKLIMDRMERGEDMSETMLTGDEEVDVPWAEVARIIKSRNRIACRKKWDYLQMQRRQKWQYVRDKSGSAASVNLAFVKAIIDTGAADESELNWSSLPYPRANLKWKNLRERELQAPNANLQFREV 134
            WTEQEEKLLNKLIMDRME  EDMSE MLTGDE+VDVPWAEVARIIKSRNRIACRKKWDYLQMQRRQK QYVRD SGSAASVNLAFVKAIIDTGAADESELNWSSLPYPRANLKWKNLRERELQAPNANLQFRE 
Sbjct:  219 WTEQEEKLLNKLIMDRMECSEDMSEVMLTGDEDVDVPWAEVARIIKSRNRIACRKKWDYLQMQRRQKRQYVRDTSGSAASVNLAFVKAIIDTGAADESELNWSSLPYPRANLKWKNLRERELQAPNANLQFREA 352
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19469.6256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNL6_ECTSI1.470e-7893.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2Z7_9PHAE2.000e-7894.78MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 1..78
e-value: 2.7E-6
score: 29.3
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 1..61
score: 7.468

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19469contigEcto-sp13_S_contig19469:525..3214 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19469.6256.1mRNA_Ecto-sp13_S_contig19469.6256.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19469 525..3214 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19469.6256.1 ID=prot_Ecto-sp13_S_contig19469.6256.1|Name=mRNA_Ecto-sp13_S_contig19469.6256.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=139bp
WTEQEEKLLNKLIMDRMERGEDMSETMLTGDEEVDVPWAEVARIIKSRNR
IACRKKWDYLQMQRRQKWQYVRDKSGSAASVNLAFVKAIIDTGAADESEL
NWSSLPYPRANLKWKNLRERELQAPNANLQFREVRLNY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017877Myb-like_dom