prot_Ecto-sp13_S_contig1944.6245.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1944.6245.1
Unique Nameprot_Ecto-sp13_S_contig1944.6245.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length741
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1944.6245.1 vs. uniprot
Match: D8LBP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP2_ECTSI)

HSP 1 Score: 712 bits (1839), Expect = 7.150e-250
Identity = 455/559 (81.40%), Postives = 469/559 (83.90%), Query Frame = 0 
Query:  182 MACMLYLRKKSRKKKAMTTTTHVKDSATGQTGRVAALGETGKMEAPCTAAIAPSKVECSFTPVPPPQSATTAPAPFGSVGETPQPVATMSAGDKAPPARTTGPPSPFSAGMERELDMFVRSRPKDKSSTSSAVVLEAQRRARRRALSMQKRNTAEEERKTGALESAKKPLTVADIEQLKASRRAALARAASQIQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAVLAYDEAQADERERRVRNETYARIRREERRRELALQRQEDERVEMMRMYEAGERYKGTSPVATMIPAPVPAVHSARSFFSITDSASIAETVVGDHGPGVASSASRRRKSWRRVDPDHIEEVQDAFEGAYSNSEGAQDVRKAELDALKSTHHQPQANQQGSDPAKRTTTTTSPSGGALLELDLASSPTNARRASGSSCAPLLPDEDSSENVTVRRGLRKPPLLSPTRPSFLSRYARSASASATTCVAASAYGSRNRKQGALGRRRISTTPVWKRPAVPLSKPYVPVPQKDTDGRIS 740
            M CMLYLRKK+RKKK MT TTHVKDSATGQTGRVAALGE+GK EAPC AA+APSKVECSFTPVPPPQSAT APAPFGSVGETP+P  TMSAGD+APP+RTTGPPSPFSAGMERELD+FV SRPKDKS  SSAVVLEAQRRARRRALSMQKR TAEEERK GALESAKKP TVADIE+LKASRRAALARAASQIQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                              VAAVLAYDEAQADERERRVRNETYARIRREERRRELALQRQEDERVEMMRMYEAGERYKGTSPVAT++PAPVPAVHSARSFFSITDSASIAETVVGD+GPGVASSASRRRK+WRRVDPDHIEEVQDA EGA SNS GAQDVRKAELDALKSTHHQPQANQQGS PA+ T                                  LPD+DS E VTV R LRKPPLLSPTRPSF SRYARSASASATT VAASAYGSRNRKQGALGRRRISTTPVWKRPAVPLSKPYVPVPQKDT GRIS
Sbjct:    1 MECMLYLRKKARKKKVMTATTHVKDSATGQTGRVAALGESGKEEAPCAAALAPSKVECSFTPVPPPQSATMAPAPFGSVGETPKPAVTMSAGDRAPPSRTTGPPSPFSAGMERELDVFVMSRPKDKSGMSSAVVLEAQRRARRRALSMQKRKTAEEERKAGALESAKKPPTVADIERLKASRRAALARAASQIQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSIVAAEKKQRERQLGLVRQAEAEAKRERVAAVLAYDEAQADERERRVRNETYARIRREERRRELALQRQEDERVEMMRMYEAGERYKGTSPVATVLPAPVPAVHSARSFFSITDSASIAETVVGDNGPGVASSASRRRKTWRRVDPDHIEEVQDALEGACSNSGGAQDVRKAELDALKSTHHQPQANQQGSTPAQHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPDDDSGEMVTVSRRLRKPPLLSPTRPSFSSRYARSASASATTGVAASAYGSRNRKQGALGRRRISTTPVWKRPAVPLSKPYVPVPQKDTGGRIS 559
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1944.6245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBP2_ECTSI7.150e-25081.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 367..394
NoneNo IPR availableCOILSCoilCoilcoord: 417..441

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1944contigEcto-sp13_S_contig1944:2210..6117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1944.6245.1mRNA_Ecto-sp13_S_contig1944.6245.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1944 1982..6117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1944.6245.1 ID=prot_Ecto-sp13_S_contig1944.6245.1|Name=mRNA_Ecto-sp13_S_contig1944.6245.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=741bp
MQPTQRALGPPSPPPSSSSSPPNAPRRQPHTPLPPGDDDGALELGSLNLI
DRARALCAAADDVQKATIEASRRIAAIHGNPDRPPRQKKKNAPVKEPPDV
CARLPSDIPPPRGEGWRRLGPVSVVCGSNRISAPPQTNRRALTREVEVCI
DGGFYSVVPADLDPGGGFCVSLDRDFAGETNMACMLYLRKKSRKKKAMTT
TTHVKDSATGQTGRVAALGETGKMEAPCTAAIAPSKVECSFTPVPPPQSA
TTAPAPFGSVGETPQPVATMSAGDKAPPARTTGPPSPFSAGMERELDMFV
RSRPKDKSSTSSAVVLEAQRRARRRALSMQKRNTAEEERKTGALESAKKP
LTVADIEQLKASRRAALARAASQIQKAKSQKQEAEARSEGERQKKEAEAA
RKAHALRSAAAARGSIAAAEKKQRERQLELVRQAEAEAKRERVAAVLAYD
EAQADERERRVRNETYARIRREERRRELALQRQEDERVEMMRMYEAGERY
KGTSPVATMIPAPVPAVHSARSFFSITDSASIAETVVGDHGPGVASSASR
RRKSWRRVDPDHIEEVQDAFEGAYSNSEGAQDVRKAELDALKSTHHQPQA
NQQGSDPAKRTTTTTSPSGGALLELDLASSPTNARRASGSSCAPLLPDED
SSENVTVRRGLRKPPLLSPTRPSFLSRYARSASASATTCVAASAYGSRNR
KQGALGRRRISTTPVWKRPAVPLSKPYVPVPQKDTDGRIS*
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