prot_Ecto-sp13_S_contig194.6222.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig194.6222.1
Unique Nameprot_Ecto-sp13_S_contig194.6222.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length383
Homology
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BLAST of mRNA_Ecto-sp13_S_contig194.6222.1 vs. uniprot
Match: A0A6H5K330_9PHAE (CCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K330_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 2.320e-117
Identity = 278/376 (73.94%), Postives = 280/376 (74.47%), Query Frame = 0 
Query:    1 MVEIMDRGREVEWSPDMELEGDDAEKAAALLLAVAPRNRSFDATQNPEGPGPAGTTGXXXXXXXXXXXXXXXXXXXXDGGGVAHVDTEGGAVPLEGAGAGXXXXXXXXGSWESPLKREFDGPVNGALPNGSYRDSATAALSGGDPRVAAVSIASSPSSLXXXXXXXXXXXXXXGGASMRLQSLADLATQELQTMGDVDETDTAGTHGHRGDHXXXXXXXXXXXXXXXXXXXXXXAGFSPKRHISPRLSGGGXXXXXXXXXXXXXXXXXXXXXFSA---------PLPPARAAPGHHXHLRERGVPRSRHERAEXXXXXXXXXXXXXRADGGRGRRHRPRSVSMPEGMELQARAWSGGYSSGRRKSGRIDSIKEELE 367
            MVEIMDRGREVEWSPDMELEGDDAEKAAALLLAVAPRNRSFDATQ PEGPGPAGTTGXXXXXXXXXXXXXXXXXX             GGAVP EGA   XXXXXXXX S ES LKREF G VNGALPN SYRDSA AAL GGDPR AAVSIASSPSS               G ASMRLQSLADLATQELQTMGDVDETDT G HGHR                         AGFSPKRH+SPRLSGGG XXXXXXXXXXXXXXXX     SA         PLPPARAAP   X LRERGVPRSRHER  XXXXXXXXX    RA+GGRG RHRPRSVSMPEGMELQARAWSGGYSSGRRKSGRIDSIKEELE
Sbjct:    1 MVEIMDRGREVEWSPDMELEGDDAEKAAALLLAVAPRNRSFDATQKPEGPGPAGTTGXXXXXXXXXXXXXXXXXX-------------GGAVPPEGAXXXXXXXXXXXXSGESALKREFGGTVNGALPNASYRDSAAAALPGGDPREAAVSIASSPSSFSLSTSPRPRSASSGGVASMRLQSLADLATQELQTMGDVDETDTPGIHGHRRHQQHQRSLSNGNSQSSSARTPPLPAGFSPKRHLSPRLSGGGGXXXXXXXXXXXXXXXXVSALSSAAXXXXXCSAPLPPARAAPXXXXXLRERGVPRSRHERXXXXXXXXXXXHAAARAEGGRGMRHRPRSVSMPEGMELQARAWSGGYSSGRRKSGRIDSIKEELE 363
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BLAST of mRNA_Ecto-sp13_S_contig194.6222.1 vs. uniprot
Match: D8LD77_ECTSI (CCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD77_ECTSI)

HSP 1 Score: 335 bits (858), Expect = 3.370e-108
Identity = 308/375 (82.13%), Postives = 310/375 (82.67%), Query Frame = 0 
Query:    1 MVEIMDRGREVEWSPDMELEGDDAEKAAALLLAVAPRNRSFDATQNPEGPGPAGTTGXXXXXXXXXXXXXXXXXXXXDGGG-VAHVDTEGGAVPLEGAGAGXXXXXXXXGSWESPLKREFDGPVNGALPNGSYRDSATAALSGGDPRVAAVSIASSPSSLXXXXXXXXXXXXXX----GGASMRLQSLADLATQELQTMGDVDETDTAGTHGHRGDHXXXXXXXXXXXXXXXXXXXXXXAGFSPKRHISPRLSGGGXXXXXXXXXXXXXXXXXXXXXFSAPLPPARAAPGHHXHLRERGVPRSRHERAEXXXXXXXXXXXXXRADGGRGRRHRPRSVSMPEGMELQARAWSGGYSSGRRKSGRIDSIKEELEVTL 370
            MVEIMD  REVEWSPDMELEGDDAEKAAALLLAVAPRNRSFDATQNPEGPGPAGTTGXXXXXXXXXXXXXXXXXXXX     VAHV TEGG VP EGAG  XXXXXXXX S ES LKREF G +NGALPN SYRDSA AALSGGDPR A VS ASSPS  XXXXXXXXXXXXXX    GGASMRLQSLADLATQELQTM DVDETDTAG HG     XXXXXXXXXXXXXXXX      AGFSPKRH+SPRLSGG XXXXXXXXXXXXXXXXXXXXX                 LRERGVPRSRHERAEXXXXXXXXXXXXX     RGRRHRPRSVSMPEGMELQARAWSGGYSSGRRKSGRIDSIKEELEV L
Sbjct:    1 MVEIMDSRREVEWSPDMELEGDDAEKAAALLLAVAPRNRSFDATQNPEGPGPAGTTGXXXXXXXXXXXXXXXXXXXXXXXXXVAHVGTEGGTVPSEGAGXXXXXXXXXXXSGESALKREFGGMLNGALPNTSYRDSAAAALSGGDPRAATVSTASSPSXXXXXXXXXXXXXXXXXXIGGGASMRLQSLADLATQELQTMCDVDETDTAGAHGXXXXXXXXXXXXXXXXXXXXXRTPPAPAGFSPKRHLSPRLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----LRERGVPRSRHERAEXXXXXXXXXXXXXXXXXXRGRRHRPRSVSMPEGMELQARAWSGGYSSGRRKSGRIDSIKEELEVCL 371
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig194.6222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K330_9PHAE2.320e-11773.94CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LD77_ECTSI3.370e-10882.13CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 300..320

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig194contigEcto-sp13_S_contig194:23888..27664 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig194.6222.1mRNA_Ecto-sp13_S_contig194.6222.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig194 23721..27664 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig194.6222.1 ID=prot_Ecto-sp13_S_contig194.6222.1|Name=mRNA_Ecto-sp13_S_contig194.6222.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=383bp
MVEIMDRGREVEWSPDMELEGDDAEKAAALLLAVAPRNRSFDATQNPEGP
GPAGTTGGGGGGGGGSGPVNAPPAPPPDGGGVAHVDTEGGAVPLEGAGAG
AAGGAAGGGSWESPLKREFDGPVNGALPNGSYRDSATAALSGGDPRVAAV
SIASSPSSLSLSTSPRPRSASSGGGASMRLQSLADLATQELQTMGDVDET
DTAGTHGHRGDHHHHRSLSNGNSQSSSARTPPPPAGFSPKRHISPRLSGG
GGGGRGGRGVSALSSAAAAVASFSAPLPPARAAPGHHHHLRERGVPRSRH
ERAEEEEEEEEEMRAAARADGGRGRRHRPRSVSMPEGMELQARAWSGGYS
SGRRKSGRIDSIKEELEVTLCLHLAFAAAAAAA
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