prot_Ecto-sp13_S_contig19169.6120.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19169.6120.1
Unique Nameprot_Ecto-sp13_S_contig19169.6120.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length199
Homology
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BLAST of mRNA_Ecto-sp13_S_contig19169.6120.1 vs. uniprot
Match: D7G3W3_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W3_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 6.420e-98
Identity = 169/172 (98.26%), Postives = 169/172 (98.26%), Query Frame = 0 
Query:   10 GRPVVPPVFQQAMDAGAAAGXXXXXXXXEGWIARGATAEQLSLWGVQPPPGLARQYATRHGERGGGMNMMTMNDFMESDAALNQMLRSVTPQGAGGAGAPPLVRVVRGTGGADTGWTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVHPLLLRHVRAPGSTGSG 181
            GRP V PVFQQ MDAGAAAGXXXXXXXXEGWIARGATAEQLSLWGVQPPPGLARQYATRHGERGGGMNMMTMNDFMESDAALNQMLRSVTPQGAGGAGAPPLVRVVRGTGGADTGWTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVHPLLLRHVRAPGSTGSG
Sbjct:   95 GRPGVHPVFQQTMDAGAAAGXXXXXXXXEGWIARGATAEQLSLWGVQPPPGLARQYATRHGERGGGMNMMTMNDFMESDAALNQMLRSVTPQGAGGAGAPPLVRVVRGTGGADTGWTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVHPLLLRHVRAPGSTGSG 266
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BLAST of mRNA_Ecto-sp13_S_contig19169.6120.1 vs. uniprot
Match: A0A6H5L6M1_9PHAE (UBA domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M1_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 4.870e-97
Identity = 159/175 (90.86%), Postives = 162/175 (92.57%), Query Frame = 0 
Query:    7 RAGGRPVVPPVFQQAMDAGAAAGXXXXXXXXEGWIARGATAEQLSLWGVQPPPGLARQYATRHGERGGGMNMMTMNDFMESDAALNQMLRSVTPQGAGGAGAPPLVRVVRGTGGADTGWTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVHPLLLRHVRAPGSTGSG 181
            RAGGRP VPPVFQQAMDAGA           EGWIARGATAEQLS+WGVQPPPGLARQYATRHGERGGGMNMMTMNDFMESD+ALNQMLRS+TPQGAGGAGAPPLVRVVRGTGG DTGWTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVHPLLLRHVRAPGSTGSG
Sbjct: 2141 RAGGRPGVPPVFQQAMDAGAXXXIGLGGGGGEGWIARGATAEQLSMWGVQPPPGLARQYATRHGERGGGMNMMTMNDFMESDSALNQMLRSLTPQGAGGAGAPPLVRVVRGTGGGDTGWTEMIAHDLHAAAPGPSHNTTRLFPDGPSAATQAHAAPVVHPLLLRHVRAPGSTGSG 2315
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19169.6120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3W3_ECTSI6.420e-9898.26HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L6M1_9PHAE4.870e-9790.86UBA domain-containing protein (Fragment) n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19169contigEcto-sp13_S_contig19169:39..2532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19169.6120.1mRNA_Ecto-sp13_S_contig19169.6120.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19169 39..2532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19169.6120.1 ID=prot_Ecto-sp13_S_contig19169.6120.1|Name=mRNA_Ecto-sp13_S_contig19169.6120.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=199bp
AAAAAGRAGGRPVVPPVFQQAMDAGAAAGIGLGGGGGEGWIARGATAEQL
SLWGVQPPPGLARQYATRHGERGGGMNMMTMNDFMESDAALNQMLRSVTP
QGAGGAGAPPLVRVVRGTGGADTGWTEMIAHDLHAAAPGPSHNTTRLFPD
GPSAATQAHAAPVVHPLLLRHVRAPGSTGSGSRSSGRGGRGSRGGGGNG
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