prot_Ecto-sp13_S_contig19168.6119.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig19168.6119.1
Unique Nameprot_Ecto-sp13_S_contig19168.6119.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length85
Homology
BLAST of mRNA_Ecto-sp13_S_contig19168.6119.1 vs. uniprot
Match: D7G0S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S9_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 1.380e-41
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
Query:    1 MTGTPYISRFSDVNGQLAFLGAEGAFRGGSDLGDKAPRRETQGETVAFLRRVLLRHSQGMKLGGHSILGLPTITHKV 77
            MTGTPYISRFSDVNGQLAFLGAEGAFRGGSDLGDKAPRRETQGETVAFLRRVLLRHSQGMKLGGHSILGLPTIT+KV
Sbjct:  833 MTGTPYISRFSDVNGQLAFLGAEGAFRGGSDLGDKAPRRETQGETVAFLRRVLLRHSQGMKLGGHSILGLPTITNKV 909          
BLAST of mRNA_Ecto-sp13_S_contig19168.6119.1 vs. uniprot
Match: A0A6H5KW09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW09_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 3.190e-33
Identity = 66/77 (85.71%), Postives = 69/77 (89.61%), Query Frame = 0
Query:    1 MTGTPYISRFSDVNGQLAFLGAEGAFRGGSDLGDKAPRRETQGETVAFLRRVLLRHSQGMKLGGHSILGLPTITHKV 77
            MTGTPYISRFSD NGQL+F+GA GAFRG SDLGDK P RETQ ETVAFLRRVL RHSQGMKLGG SILGLP+ITHKV
Sbjct:  864 MTGTPYISRFSDANGQLSFVGAGGAFRG-SDLGDKGPNRETQVETVAFLRRVLFRHSQGMKLGGKSILGLPSITHKV 939          
BLAST of mRNA_Ecto-sp13_S_contig19168.6119.1 vs. uniprot
Match: D7G0T2_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T2_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 5.890e-33
Identity = 66/77 (85.71%), Postives = 69/77 (89.61%), Query Frame = 0
Query:    1 MTGTPYISRFSDVNGQLAFLGAEGAFRGGSDLGDKAPRRETQGETVAFLRRVLLRHSQGMKLGGHSILGLPTITHKV 77
            MTGTPYISRFSD NGQL+F+GA  AFRG SDLGDK P RETQ ETVAFLRRVLLRHSQGMKLGG SILGLP+ITHKV
Sbjct:  803 MTGTPYISRFSDANGQLSFVGAGSAFRG-SDLGDKGPNRETQVETVAFLRRVLLRHSQGMKLGGKSILGLPSITHKV 878          
BLAST of mRNA_Ecto-sp13_S_contig19168.6119.1 vs. uniprot
Match: D7G0T8_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T8_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 1.570e-25
Identity = 53/77 (68.83%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 MTGTPYISRFSDVNGQLAFLGAEGAFRGGSDLGDKAPRRETQGETVAFLRRVLLRHSQGMKLGGHSILGLPTITHKV 77
            MTGTP+ S+FSD+N QL+F+G  G+FR   DLGDK P  +TQ E  AFLRRV+LRHSQGMKLG +S+LGLPTITHKV
Sbjct:  778 MTGTPFTSKFSDLNRQLSFVGVAGSFRD-RDLGDKRPNTDTQVEVTAFLRRVVLRHSQGMKLGANSLLGLPTITHKV 853          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig19168.6119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G0S9_ECTSI1.380e-4198.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW09_9PHAE3.190e-3385.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0T2_ECTSI5.890e-3385.71Helicase ATP-binding domain-containing protein n=1... [more]
D7G0T8_ECTSI1.570e-2568.83Helicase ATP-binding domain-containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig19168contigEcto-sp13_S_contig19168:2457..2711 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig19168.6119.1mRNA_Ecto-sp13_S_contig19168.6119.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig19168 2457..2723 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig19168.6119.1 ID=prot_Ecto-sp13_S_contig19168.6119.1|Name=mRNA_Ecto-sp13_S_contig19168.6119.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp
MTGTPYISRFSDVNGQLAFLGAEGAFRGGSDLGDKAPRRETQGETVAFLR
RVLLRHSQGMKLGGHSILGLPTITHKVGCTSRFV*
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