prot_Ecto-sp13_S_contig18459.5753.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18459.5753.1
Unique Nameprot_Ecto-sp13_S_contig18459.5753.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length160
Homology
BLAST of mRNA_Ecto-sp13_S_contig18459.5753.1 vs. uniprot
Match: D7FZU0_ECTSI (Na+-bile acid cotransporter (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZU0_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 6.800e-80
Identity = 141/143 (98.60%), Postives = 141/143 (98.60%), Query Frame = 0
Query:   17 KAPTGHGGRCRSVHSHGGTASNLVTLIANGDVALSVSMTTVSTLLAAVITGPLTKFLVGALVDISAVTLMKATAQVVFLPGAMGLLLNTRAKGITRRLAPYTPLLCVALVAMICGSVVAANSSILLGSGAALVGAVLTLHAGG 159
            KAP GHGGRCRSVHSHGGTASNLVTLIANGDVALSVSMTTVSTLLAAVITGPLTKFLVGALVDISAVTLMKATAQVVFLP AMGLLLNTRAKGITRRLAPYTPLLCVALVAMICGSVVAANSSILLGSGAALVGAVLTLHAGG
Sbjct:  114 KAPAGHGGRCRSVHSHGGTASNLVTLIANGDVALSVSMTTVSTLLAAVITGPLTKFLVGALVDISAVTLMKATAQVVFLPVAMGLLLNTRAKGITRRLAPYTPLLCVALVAMICGSVVAANSSILLGSGAALVGAVLTLHAGG 256          
BLAST of mRNA_Ecto-sp13_S_contig18459.5753.1 vs. uniprot
Match: A0A6H5KM36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM36_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 3.180e-63
Identity = 125/127 (98.43%), Postives = 125/127 (98.43%), Query Frame = 0
Query:   33 GGTASNLVTLIANGDVALSVSMTTVSTLLAAVITGPLTKFLVGALVDISAVTLMKATAQVVFLPGAMGLLLNTRAKGITRRLAPYTPLLCVALVAMICGSVVAANSSILLGSGAALVGAVLTLHAGG 159
            GGTASNLVTLIANGDVALSVSMTTVSTLLAAVITGPLTKFLVGALVDISAVTLMKATAQVVFLP AMGLLLNTRAKGITRRLAPYTPLLCVALVAMICGSVVAANSSILL SGAALVGAVLTLHAGG
Sbjct:  251 GGTASNLVTLIANGDVALSVSMTTVSTLLAAVITGPLTKFLVGALVDISAVTLMKATAQVVFLPVAMGLLLNTRAKGITRRLAPYTPLLCVALVAMICGSVVAANSSILLRSGAALVGAVLTLHAGG 377          
BLAST of mRNA_Ecto-sp13_S_contig18459.5753.1 vs. uniprot
Match: A0A835YU74_9STRA (Bile acid:sodium symporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU74_9STRA)

HSP 1 Score: 130 bits (328), Expect = 5.970e-34
Identity = 80/127 (62.99%), Postives = 97/127 (76.38%), Query Frame = 0
Query:   33 GGTASNLVTLIANGDVALSVSMTTVSTLLAAVITGPLTKFLVGALVDISAVTLMKATAQVVFLPGAMGLLLNTRAKGITRRLAPYTPLLCVALVAMICGSVVAANSSILLGSGAALVGAVLTLHAGG 159
            GGTASNLV LIA  D+ALSV +T  ST+LA   T  LT+ LVG +V +SA  L+ +TAQVVF P A+GLLL ++A+G TRRL+PYTPL CVALVA ICGSVVA N++ +  SGA LV AV T+HAGG
Sbjct:  121 GGTASNLVALIAGADIALSVLLTAASTVLATAATPLLTRALVGGVVQVSARQLVVSTAQVVFAPVALGLLLASKAQGFTRRLSPYTPLACVALVACICGSVVAQNAAAVAASGARLVAAVATMHAGG 247          
BLAST of mRNA_Ecto-sp13_S_contig18459.5753.1 vs. uniprot
Match: A0A7S0HP89_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HP89_9CRYP)

HSP 1 Score: 110 bits (276), Expect = 2.920e-26
Identity = 69/127 (54.33%), Postives = 90/127 (70.87%), Query Frame = 0
Query:   33 GGTASNLVTLIANGDVALSVSMTTVSTLLAAVITGPLTKFLVGALVDISAVTLMKATAQVVFLPGAMGLLLNTRAKGITRRLAPYTPLLCVALVAMICGSVVAANSSILLGSGAALVGAVLTLHAGG 159
            GGTASNLVTLIA  DVALSV MTTVST+ A ++T  LT  L G+LV + A  L+ +T QVV  P  +GL +NT A G+ + ++  TPLLCV LV++ICGSV+A  +S  + +G  L+GAV+ LH GG
Sbjct:  211 GGTASNLVTLIAKADVALSVLMTTVSTMAAPIMTPLLTSILAGSLVPVDASGLLISTLQVVLAPVGLGLAINTFAPGLCKMVSGVTPLLCVILVSLICGSVIAQTASSFIAAGLPLLGAVIGLHLGG 337          
BLAST of mRNA_Ecto-sp13_S_contig18459.5753.1 vs. uniprot
Match: L1JAR9_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JAR9_GUITC)

HSP 1 Score: 109 bits (272), Expect = 1.210e-25
Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = 0
Query:   33 GGTASNLVTLIANGDVALSVSMTTVSTLLAAVITGPLTKFLVGALVDISAVTLMKATAQVVFLPGAMGLLLNTRAKGITRRLAPYTPLLCVALVAMICGSVVAANSSILLGSGAALVGAVLTLHAGG 159
            GGTASNLVTLIA  DVALSV MTTVST+ A ++T  LT  L G+LV + A  L+ +T QVV  P  +GL +NT A  + + ++  TPLLCV LV++ICGSV+A  +S  + +G  L+GAV+ LH GG
Sbjct:  103 GGTASNLVTLIAKADVALSVLMTTVSTMAAPIMTPLLTSILAGSLVPVDASGLLISTLQVVLAPVGLGLAINTFAPAVCKMVSGVTPLLCVVLVSLICGSVIAQTASSFIAAGLPLLGAVIGLHLGG 229          
BLAST of mRNA_Ecto-sp13_S_contig18459.5753.1 vs. uniprot
Match: A0A1Z5JT56_FISSO (Bile acid:Na+ symporter, BASS family n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JT56_FISSO)

HSP 1 Score: 102 bits (254), Expect = 1.220e-22
Identity = 69/136 (50.74%), Postives = 92/136 (67.65%), Query Frame = 0
Query:   24 GRCRSVHSHGGTASNLVTLIANGDVALSVSMTTVSTLLAAVITGPLTKFLVGALVDISAVTLMKATAQVVFLPGAMGLLLNTRAKGITRRLAPYTPLLCVALVAMICGSVVAANSSILLGSGA--ALVGAVLTLHA 157
            G C    S GGTASNLV+LIA  DVALSV +T +ST++A  +T  L KFLVGA + +S + L +ATA+VV +P   G++LN +   + R L+ +TP   V LVA+ICG VVA N+++LLG     AL+ AVL LHA
Sbjct:  197 GLCLVGASPGGTASNLVSLIAQADVALSVILTAISTMMAVFMTPLLVKFLVGANIQVSGMALCEATARVVLVPVLGGMVLNAKLPRVARFLSRFTPFASVLLVALICGGVVAQNAALLLGEAGPRALLPAVLLLHA 332          
BLAST of mRNA_Ecto-sp13_S_contig18459.5753.1 vs. uniprot
Match: W7U603_9STRA (Sodium bile acid symporter family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U603_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.050e-22
Identity = 69/132 (52.27%), Postives = 88/132 (66.67%), Query Frame = 0
Query:   33 GGTASNLVTLIANGDVALSVSMTTVSTLLAAVITGPLTKFLVGALVDISAVTLMKATAQVVFLPGAMGLLLNTRA-----KGITRRLAPYTPLLCVALVAMICGSVVAANSSILLGSGAALVGAVLTLHAGG 159
            GGTASNLVTL+A  DVALS+SMT VSTL A  +T  LT  L+G+LV +    L++ T QVV LP A+GL+ N+         +TR L   TPL+   LVA ICG VVA N++ +L SG +L+GAVL LH+ G
Sbjct:  202 GGTASNLVTLLAEADVALSISMTAVSTLTAGAMTPLLTSLLLGSLVPVDTAALLRTTLQVVLLPVALGLVTNSYLLPSLPPSLTRGLTRSTPLVSGLLVAAICGKVVATNAAAVLQSGGSLLGAVLALHSFG 333          
BLAST of mRNA_Ecto-sp13_S_contig18459.5753.1 vs. uniprot
Match: A0A061REZ3_9CHLO (Bile acid:Na+ symporter, BASS family n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061REZ3_9CHLO)

HSP 1 Score: 101 bits (251), Expect = 2.740e-22
Identity = 67/127 (52.76%), Postives = 81/127 (63.78%), Query Frame = 0
Query:   33 GGTASNLVTLIANGDVALSVSMTTVSTLLAAVITGPLTKFLVGALVDISAVTLMKATAQVVFLPGAMGLLLNTRAKGITRRLAPYTPLLCVALVAMICGSVVAANSSILLGSGAALVGAVLTLHAGG 159
            GGTASN+VT +A  DVALSV MTTVST+LAA++T  LTK  VG +V + A  L K+T QVV LP   G  LN        R  P++P++ VA+VAMIC SVVAA    +   G  LV  V  LHAGG
Sbjct:  194 GGTASNIVTFLARADVALSVGMTTVSTVLAALMTPLLTKLAVGTMVPVDAAALFKSTCQVVLLPVMAGAALNRFFPRQVARTRPFSPVVAVAIVAMICASVVAAQEGAIRRCGLQLVACVFGLHAGG 320          
BLAST of mRNA_Ecto-sp13_S_contig18459.5753.1 vs. uniprot
Match: A0A7S1SKH7_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SKH7_9CHLO)

HSP 1 Score: 101 bits (252), Expect = 4.620e-22
Identity = 63/127 (49.61%), Postives = 84/127 (66.14%), Query Frame = 0
Query:   33 GGTASNLVTLIANGDVALSVSMTTVSTLLAAVITGPLTKFLVGALVDISAVTLMKATAQVVFLPGAMGLLLNTRAKGITRRLAPYTPLLCVALVAMICGSVVAANSSILLGSGAALVGAVLTLHAGG 159
            GGTASN+VT +A  DVALSV +TTVSTLLAA +T  LT+  VG LV ++ + L K+T QVV  P A G  LN    G   R  P++P++ +  VA+ICGSVVA  + ++  SG  L+G +  LH+GG
Sbjct:  374 GGTASNIVTFLAKADVALSVGLTTVSTLLAAFMTPMLTQLAVGTLVPVNVLALFKSTCQVVLAPVAAGAALNHFFPGPVARSRPFSPIVAILTVALICGSVVAQQADVIRSSGLHLLGCICLLHSGG 500          
BLAST of mRNA_Ecto-sp13_S_contig18459.5753.1 vs. uniprot
Match: B5Y441_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y441_PHATC)

HSP 1 Score: 99.4 bits (246), Expect = 4.810e-22
Identity = 75/150 (50.00%), Postives = 98/150 (65.33%), Query Frame = 0
Query:   16 SKAPTGHG---GRCRSVHSHGGTASNLVTLIANGDVALSVSMTTVSTLLAAVITGPLTKFLVGALVDISAVTLMKATAQVVFLPGAMGLLLNTRAKGITRRLAPYTPLLCVALVAMICGSVVAANSSILLGSGAA-----LVG-AVLTLH 156
            S  PTG     G C    S GGTASNLV+LIA  DVALSV +TT ST+LA + T  L K LVG+ V +S V L++ATA+VV LP  +G++LN +   + R L+ +TP   V LV++ICG VVA N+S+LL S A+     ++G AVL LH
Sbjct:   87 SSGPTGPSLFLGLCLVGCSPGGTASNLVSLIAQADVALSVILTTCSTVLAVLATPLLVKLLVGSTVAVSGVALVQATARVVLLPVLLGMILNAKLPRLARFLSRFTPFASVLLVSLICGGVVAQNASMLLHSPASAANLSVIGVAVLMLH 236          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18459.5753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZU0_ECTSI6.800e-8098.60Na+-bile acid cotransporter (ISS) n=1 Tax=Ectocarp... [more]
A0A6H5KM36_9PHAE3.180e-6398.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YU74_9STRA5.970e-3462.99Bile acid:sodium symporter n=1 Tax=Tribonema minus... [more]
A0A7S0HP89_9CRYP2.920e-2654.33Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
L1JAR9_GUITC1.210e-2553.54Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A1Z5JT56_FISSO1.220e-2250.74Bile acid:Na+ symporter, BASS family n=1 Tax=Fistu... [more]
W7U603_9STRA2.050e-2252.27Sodium bile acid symporter family protein n=2 Tax=... [more]
A0A061REZ3_9CHLO2.740e-2252.76Bile acid:Na+ symporter, BASS family n=1 Tax=Tetra... [more]
A0A7S1SKH7_9CHLO4.620e-2249.61Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
B5Y441_PHATC4.810e-2250.00Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002657Bile acid:sodium symporter/arsenical resistance protein Acr3PFAMPF01758SBFcoord: 31..141
e-value: 1.8E-13
score: 50.7
IPR038770Sodium/solute symporter superfamilyGENE3D1.20.1530.20coord: 30..159
e-value: 6.0E-30
score: 106.2
IPR004710Bile acid:sodium symporterPANTHERPTHR10361SODIUM-BILE ACID COTRANSPORTERcoord: 32..157
NoneNo IPR availablePANTHERPTHR10361:SF62SODIUM/PYRUVATE COTRANSPORTER BASS2, CHLOROPLASTICcoord: 32..157
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..139
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 159..159
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 103..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..47
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..158
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
NoneNo IPR availableTMHMMTMhelixcoord: 80..102
NoneNo IPR availableTMHMMTMhelixcoord: 140..157
NoneNo IPR availableTMHMMTMhelixcoord: 48..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18459contigEcto-sp13_S_contig18459:579..3360 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18459.5753.1mRNA_Ecto-sp13_S_contig18459.5753.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18459 579..3360 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18459.5753.1 ID=prot_Ecto-sp13_S_contig18459.5753.1|Name=mRNA_Ecto-sp13_S_contig18459.5753.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=160bp
LHGNDAHPGRLRRRRSKAPTGHGGRCRSVHSHGGTASNLVTLIANGDVAL
SVSMTTVSTLLAAVITGPLTKFLVGALVDISAVTLMKATAQVVFLPGAMG
LLLNTRAKGITRRLAPYTPLLCVALVAMICGSVVAANSSILLGSGAALVG
AVLTLHAGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002657BilAc:Na_symport/Acr3
IPR038770Na+/solute_symporter_sf
IPR004710Bilac:Na_transpt