prot_Ecto-sp13_S_contig17454.5232.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17454.5232.1
Unique Nameprot_Ecto-sp13_S_contig17454.5232.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length297
Homology
BLAST of mRNA_Ecto-sp13_S_contig17454.5232.1 vs. uniprot
Match: D8LSH8_ECTSI (DUF2451 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH8_ECTSI)

HSP 1 Score: 339 bits (870), Expect = 2.200e-112
Identity = 232/297 (78.11%), Postives = 234/297 (78.79%), Query Frame = 0
Query:    1 MMIAPPSCFFLSSQLLPPSLPPSLPSLSRFVCLCLXXXXXXXXXTLHARLGLLPVSQRAAVDAYVAEIEQVTAQLRSFAYWAQAPGLVGGEGIAAAVEGQSWTRKKIRNDASPYVEEWITRCLLIRGAIYPPSQTPXXXXXXXXXXXXXXAGNGLPPDAVDAXXXXXX---AGIERSATNRRGXXXXXXXXXXXXXXXXAADGTVGSVIPTRARRLVWCRVVDALLLSLLRGFSRVRRCSTEGRALMSMDLQARSCCSAALALGLEDPAATQAAKAHVHAYVNAFYFGDEDLHKWIK 294
            M+IAPPS FFLSS+LLPPSL                 XXXXXXX   ARLGLLPVSQRAAVDAYVAEIEQVTAQLRSFAYWAQAPGLVGGEGIA AVEGQSWTRKKIRNDASPYVEEW TRCLLIRGAIYPPSQT XXXXXXXXXXXXXX            XXXXXX   AGIER ATN R             XXXXAADGTVGSVIP RARRLVW RVVDALLLSLLRGFSRVRRCSTEGRALMSMDLQA       LALGLEDPAATQAAKAHVHAYVNAFYFGDEDLHKWIK
Sbjct:    1 MIIAPPSRFFLSSRLLPPSLXXXXXXXXXXXXXXXSPXXXXXXXXHRARLGLLPVSQRAAVDAYVAEIEQVTAQLRSFAYWAQAPGLVGGEGIATAVEGQSWTRKKIRNDASPYVEEWTTRCLLIRGAIYPPSQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGIERPATNGRVRGGRGESAGSGGXXXXAADGTVGSVIPARARRLVWRRVVDALLLSLLRGFSRVRRCSTEGRALMSMDLQA-------LALGLEDPAATQAAKAHVHAYVNAFYFGDEDLHKWIK 290          
BLAST of mRNA_Ecto-sp13_S_contig17454.5232.1 vs. uniprot
Match: A0A6H5KJN5_9PHAE (DUF2451 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN5_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 2.240e-94
Identity = 209/254 (82.28%), Postives = 209/254 (82.28%), Query Frame = 0
Query:   48 ARLGLLPVSQRAAVDAYVAEIEQVTAQLRSFAYWAQAPGLVGGEGIAAAVEGQSWTRKKIRNDASPYVEEWITRCLLIRGAIYPPSQTPXXXXXXXXXXXXXXAGNGLPPDAVDAXXXXXXAGIERSATNRRGXXXXXXXXXXXXXXXX-------AADGTVGSVIPTRARRLVWCRVVDALLLSLLRGFSRVRRCSTEGRALMSMDLQARSCCSAALALGLEDPAATQAAKAHVHAYVNAFYFGDEDLHKWIK 294
            A LGLLPVSQRAAVDAYVAEIEQVTAQLRSFAYWAQAPGLVGGEGIAAAVEGQSWTRKKIRNDASPYVEEWITRCLLIRGAIYPPSQTP  XXXXXXXXXXXX            XXXXXX            XXXXXXXXXXXXXXXX        ADGTVGSVIP RARRLVW RVVDALLLSLLRGFSRVRRCSTEGRALMSMDLQA       LALGLEDPAAT AAKAHVHAYVNAFYFGDEDLHKWIK
Sbjct:  391 AGLGLLPVSQRAAVDAYVAEIEQVTAQLRSFAYWAQAPGLVGGEGIAAAVEGQSWTRKKIRNDASPYVEEWITRCLLIRGAIYPPSQTPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTADGTVGSVIPARARRLVWRRVVDALLLSLLRGFSRVRRCSTEGRALMSMDLQA-------LALGLEDPAATHAAKAHVHAYVNAFYFGDEDLHKWIK 637          
BLAST of mRNA_Ecto-sp13_S_contig17454.5232.1 vs. uniprot
Match: W7TPS4_9STRA (Vacuolar protein sorting-associated protein 54 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPS4_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 4.160e-12
Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 0
Query:  199 DGTVGSVIPTRARRLVWCRVVDALLLSLLRGFSRVRRCSTEGRALMSMDLQARSCCSAALALGLEDPAATQAAK--AHVHAYVNAFYFGDEDLHKWIK 294
            DG     IP+ A+ L+W  V   ++ +LL GFSR+ +CSTEGR+LMSMDLQA       + +GL++    + A+  A+V  Y+ AFY+G  D+  W++
Sbjct: 1317 DGLDNMYIPSEAKVLIWTEVAQCIMGTLLEGFSRIDKCSTEGRSLMSMDLQA-------IQVGLDEILRVRPARGRAYVENYIKAFYYGQVDVMSWVE 1407          
BLAST of mRNA_Ecto-sp13_S_contig17454.5232.1 vs. uniprot
Match: A0A7S1UKD0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKD0_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 4.520e-10
Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 0
Query:  203 GSVIPTRARRLVWCRVVDALLLSLLRGFSRVRRCSTEGRALMSMDLQARSCCSAALALGLEDPAATQAAKAHVHAYVNAFYFGDEDLHKWIK 294
            G VI    + L W     A + +L+ GFSRV+ CSTEGRALMSMD+QA     +AL     +PA    ++    AYV AFY+G+ D+  WI+
Sbjct:  235 GGVIAPPRKSLFWTEFCQACMETLVEGFSRVKNCSTEGRALMSMDVQALHQGLSAL-----EPARAARSRVWADAYVKAFYYGEADVVGWIE 321          
BLAST of mRNA_Ecto-sp13_S_contig17454.5232.1 vs. uniprot
Match: A0A836CNI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNI9_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 6.580e-10
Identity = 86/247 (34.82%), Postives = 114/247 (46.15%), Query Frame = 0
Query:   52 LLPVSQRAAVDAYVAEIEQVTAQLRSFAYWAQAPGLVGGEGIAAAVEGQSWTRKKIRNDASPYVEEWITRCLLIRGAIYP----PSQTPXXXXXXXXXXXXXXAGNGLPPDAVDAXXXXXXAGIERSATNRRGXXXXXXXXXXXXXXXXAADGTVGSVIPTRARRLVWCRVVDALLLSLLRGFSRVRRCSTEGRALMSMDLQARSCCSAALALGLEDPAATQAAKAHVHAYVNAFYFGDEDLHKWIK 294
            LLP  +RA   A+VA   +   QLR F Y      L   + + AAVE   W    +R ++S YV+    R   +   + P    P   PXXXXXXXXXXXXXX      P    A        I+RS  +R                    + T     P   RR   C    A+L +L+ G++R RRC+TEGRALM MDLQ  S    A+   L   AA   + A+V  ++NAFY  D DL +W++
Sbjct: 1561 LLPPHERARAAAHVAATARAALQLRRFVYRCAGALLAAQDRLVAAVEATPWALTALRTESSDYVKACAARAERVYALLAPDGPLPRAPPXXXXXXXXXXXXXXXXXXALPLPAAARPVLYRECIQRSRQHRLKYTARAFARTQQLHRTAPLNVTR---TPRCCRRRRCC--AQAILDALVEGYARGRRCTTEGRALMCMDLQELSAELDAIR-PLRGAAAPARSHAYVFGWINAFYLED-DLMRWVE 1800          
BLAST of mRNA_Ecto-sp13_S_contig17454.5232.1 vs. uniprot
Match: F0YK23_AURAN (DUF2451 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK23_AURAN)

HSP 1 Score: 64.3 bits (155), Expect = 1.790e-9
Identity = 34/81 (41.98%), Postives = 45/81 (55.56%), Query Frame = 0
Query:  213 LVWCRVVDALLLSLLRGFSRVRRCSTEGRALMSMDLQARSCCSAALALGLEDPAATQAAKAHVHAYVNAFYFGDEDLHKWI 293
            L+W   V A   + + GF+RV RCSTEGRALMSMDLQ         +L    PA      A+  +Y+ A+YF + DL  W+
Sbjct:    3 LIWTHAVQAAFEAFVEGFARVGRCSTEGRALMSMDLQVLQ-----FSLDKMHPARPLRGAAYADSYIKAWYFDNRDLRAWV 78          
BLAST of mRNA_Ecto-sp13_S_contig17454.5232.1 vs. uniprot
Match: A0A7S4JFC0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JFC0_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.450e-9
Identity = 43/109 (39.45%), Postives = 56/109 (51.38%), Query Frame = 0
Query:  203 GSVIPTRARRLVWCRVVDALLLSLLRGFSRVRRCSTEGRALMSMDLQARSCCSAALALGLEDPAATQAAKAHVHA------------------YVNAFYFGDEDLHKWI 293
            G+ +PT   + +W  +V+   LS+L GFS VR CSTEGRALMSMDL       AAL+ GLE  A         H+                  Y+ AFYF ++D+ KWI
Sbjct:  905 GAELPTTTMKSLWGDIVELCFLSILEGFSMVRACSTEGRALMSMDL-------AALSSGLEAHAVMDRLPGTFHSECFPSSSTPDRGMLYVDMYIKAFYFPEKDVMKWI 1006          
BLAST of mRNA_Ecto-sp13_S_contig17454.5232.1 vs. uniprot
Match: A0A7S4VAI2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VAI2_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 7.530e-8
Identity = 39/99 (39.39%), Postives = 52/99 (52.53%), Query Frame = 0
Query:  206 IPTRARRLVWCRVVDALLLSLLRGFSRVRRCSTEGRALMSMDLQARSCCSAALAL------GLED-----PAATQAAKAHVHAYVNAFYFGDEDLHKWI 293
            +P     + W  V+    LSLL GFSR+  CSTEGRALMSMDL   S  + A ++       +E      PA  Q  K +V  YV  +Y+ +ED+  WI
Sbjct:  515 LPAFVMSMAWDYVISGSFLSLLEGFSRILTCSTEGRALMSMDLVTFSSGTNAFSVMDRIQGSMESVDTPPPAMPQRGKLYVDTYVKVYYYPEEDIMNWI 613          
BLAST of mRNA_Ecto-sp13_S_contig17454.5232.1 vs. uniprot
Match: A0A7S4VS02_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VS02_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 9.090e-8
Identity = 39/99 (39.39%), Postives = 52/99 (52.53%), Query Frame = 0
Query:  206 IPTRARRLVWCRVVDALLLSLLRGFSRVRRCSTEGRALMSMDLQARSCCSAALAL------GLED-----PAATQAAKAHVHAYVNAFYFGDEDLHKWI 293
            +P     + W  V+    LSLL GFSR+  CSTEGRALMSMDL   S  + A ++       +E      PA  Q  K +V  YV  +Y+ +ED+  WI
Sbjct: 1259 LPAFVMSMAWDYVISGSFLSLLEGFSRILTCSTEGRALMSMDLVTFSSGTNAFSVMDRIQGSMESVDTPPPAMPQRGKLYVDTYVKVYYYPEEDIMNWI 1357          
BLAST of mRNA_Ecto-sp13_S_contig17454.5232.1 vs. uniprot
Match: A0A3L6VAI2_9STRA (DUF2451 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VAI2_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.420e-7
Identity = 37/95 (38.95%), Postives = 56/95 (58.95%), Query Frame = 0
Query:  203 GSVIPTRARRLVWCRVVDALLLSLLRGFSRVRRCSTEGRALMSMDLQARSCCSAALALGLEDPAATQA----AKAHVHAYVNAFYFGDEDLHKWI 293
            GS +P   R  +W  VV A++ +L+ G++ V++CS EGRALMSMDL A       L  GL+    T +     +A+VH Y+ A+YF + +L  +I
Sbjct:    7 GSAVPVAVRDELWAVVVRAVMEALVDGYANVKKCSAEGRALMSMDLMA-------LQNGLDLINHTVSEHRWGRAYVHNYIKAYYFQEPELLAFI 94          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17454.5232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSH8_ECTSI2.200e-11278.11DUF2451 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KJN5_9PHAE2.240e-9482.28DUF2451 domain-containing protein n=1 Tax=Ectocarp... [more]
W7TPS4_9STRA4.160e-1240.82Vacuolar protein sorting-associated protein 54 n=1... [more]
A0A7S1UKD0_9STRA4.520e-1043.48Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A836CNI9_9STRA6.580e-1034.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0YK23_AURAN1.790e-941.98DUF2451 domain-containing protein (Fragment) n=1 T... [more]
A0A7S4JFC0_9STRA3.450e-939.45Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4VAI2_9STRA7.530e-839.39Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4VS02_9STRA9.090e-839.39Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A3L6VAI2_9STRA1.420e-738.95DUF2451 domain-containing protein (Fragment) n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019514Syndetin, C-terminalPFAMPF10474DUF2451coord: 206..294
e-value: 1.7E-16
score: 60.7
NoneNo IPR availablePANTHERPTHR13258:SF0SYNDETINcoord: 204..294
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..296
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..28
IPR040047SyndetinPANTHERPTHR13258UNCHARACTERIZEDcoord: 204..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17454contigEcto-sp13_S_contig17454:1694..3555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17454.5232.1mRNA_Ecto-sp13_S_contig17454.5232.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17454 1694..3555 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17454.5232.1 ID=prot_Ecto-sp13_S_contig17454.5232.1|Name=mRNA_Ecto-sp13_S_contig17454.5232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=297bp
MMIAPPSCFFLSSQLLPPSLPPSLPSLSRFVCLCLPSCLPPSLPTLHARL
GLLPVSQRAAVDAYVAEIEQVTAQLRSFAYWAQAPGLVGGEGIAAAVEGQ
SWTRKKIRNDASPYVEEWITRCLLIRGAIYPPSQTPPSPPPPPPSPPPPD
AGNGLPPDAVDAPPAAAAAGIERSATNRRGRGGRGGSASSGGAGGGAADG
TVGSVIPTRARRLVWCRVVDALLLSLLRGFSRVRRCSTEGRALMSMDLQA
RSCCSAALALGLEDPAATQAAKAHVHAYVNAFYFGDEDLHKWIKVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019514Syndetin_C
IPR040047VPS50