prot_Ecto-sp13_S_contig1741.5213.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1741.5213.1
Unique Nameprot_Ecto-sp13_S_contig1741.5213.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length129
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1741.5213.1 vs. uniprot
Match: D7FT70_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT70_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 4.180e-63
Identity = 118/128 (92.19%), Postives = 119/128 (92.97%), Query Frame = 0 
Query:    1 MALAKGQSLASLQKEKAAAPGSTTAPATSAAADAPGSASRVINLAGDDGIPPPAAAAVPQGQAAVAGRAAGVSPAMAGASGG-AAPHLVATRPRGGKGLNYLQQRAEPIALPPRRLPGAVAGRRSRWP 127
            MALAKGQSLASLQKEKAAAPGSTTAPAT+AAADAPGS   VINLAGDDGIPP AAAAVPQGQA VAGRAAGVSPAMAGASGG AAP  VATRPRGGKGLNYLQQRAEPIALPPRRLPG VAGRRSRWP
Sbjct:    1 MALAKGQSLASLQKEKAAAPGSTTAPATNAAADAPGS---VINLAGDDGIPPAAAAAVPQGQATVAGRAAGVSPAMAGASGGGAAPPPVATRPRGGKGLNYLQQRAEPIALPPRRLPGVVAGRRSRWP 125
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1741.5213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT70_ECTSI4.180e-6392.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1741contigEcto-sp13_S_contig1741:9381..13133 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1741.5213.1mRNA_Ecto-sp13_S_contig1741.5213.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1741 9381..13133 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1741.5213.1 ID=prot_Ecto-sp13_S_contig1741.5213.1|Name=mRNA_Ecto-sp13_S_contig1741.5213.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=129bp
MALAKGQSLASLQKEKAAAPGSTTAPATSAAADAPGSASRVINLAGDDGI
PPPAAAAVPQGQAAVAGRAAGVSPAMAGASGGAAPHLVATRPRGGKGLNY
LQQRAEPIALPPRRLPGAVAGRRSRWPR*
back to top