prot_Ecto-sp13_S_contig17405.5210.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17405.5210.1
Unique Nameprot_Ecto-sp13_S_contig17405.5210.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length305
Homology
BLAST of mRNA_Ecto-sp13_S_contig17405.5210.1 vs. uniprot
Match: D8LII6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LII6_ECTSI)

HSP 1 Score: 551 bits (1420), Expect = 1.830e-179
Identity = 282/304 (92.76%), Postives = 295/304 (97.04%), Query Frame = 0
Query:    2 RDSALPGRDCGDPTTREVGFFLRQFKQTGKVPEALRSLIVFQPKSWARIRKVLLAPPAERIALPDDSGRILPPDSAVVKEAIGSGEGGLRVEVSLKYRRLLVQKLAKSSLITAQEHESFRNSYVEYLQSQRHQDEAESSGLEAAATGVVGQLVLLESKLNDRGSVKIDDGNDGSSAVEERLALLLQEFLPRALVVEVCMEDEGEAGGHNPDSRPDRAWFSRATQLLRQILDQWKRQRFPAASQEGDSPGLGASPEAVAEAILNSVHCCVAAVGASLVIPTSGKPGSAERQQHLNRNVGAEGIVR 305
            RDSALPGRDCGDPTTREVGFFLRQFKQT KVPEALRSLIVFQPKSWARIRKVLLAPPAERIA+PDDSGRILPPDSAVVKEAIGSGEGGLRVEVSLKYRRLLVQKLAKSSLITAQEHESFRNSYVEYLQSQRHQDEAESSG+EAAATGV GQL+LLESKLN+R S KIDDG+DGSSAVEERLALLLQEFLPRALVVE+CMEDEGEA GHNP+SRP RAWFSRATQLLRQIL+QWKRQRFPAA +EGDSPGLGASPEAVAEAILNSVHCCVAAVGASLVIPTSGKPG ++RQQ L+RNVGAEG+VR
Sbjct:  651 RDSALPGRDCGDPTTREVGFFLRQFKQTDKVPEALRSLIVFQPKSWARIRKVLLAPPAERIAMPDDSGRILPPDSAVVKEAIGSGEGGLRVEVSLKYRRLLVQKLAKSSLITAQEHESFRNSYVEYLQSQRHQDEAESSGMEAAATGVAGQLLLLESKLNERCSAKIDDGHDGSSAVEERLALLLQEFLPRALVVELCMEDEGEAEGHNPESRPGRAWFSRATQLLRQILEQWKRQRFPAADREGDSPGLGASPEAVAEAILNSVHCCVAAVGASLVIPTSGKPGLSKRQQDLDRNVGAEGVVR 954          
BLAST of mRNA_Ecto-sp13_S_contig17405.5210.1 vs. uniprot
Match: A0A6H5K6S2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6S2_9PHAE)

HSP 1 Score: 481 bits (1238), Expect = 3.550e-153
Identity = 259/323 (80.19%), Postives = 270/323 (83.59%), Query Frame = 0
Query:    2 RDSALPGRDCGDPTTRE-------------------VGFFLRQFKQTGKVPEALRSLIVFQPKSWARIRKVLLAPPAERIALPDDSGRILPPDSAVVKEAIGSGEGGLRVEVSLKYRRLLVQKLAKSSLITAQEHESFRNSYVEYLQSQRHQDEAESSGLEAAATGVVGQLVLLESKLNDRGSVKIDDGNDGSSAVEERLALLLQEFLPRALVVEVCMEDEGEAGGHNPDSRPDRAWFSRATQLLRQILDQWKRQRFPAASQEGDSPGLGASPEAVAEAILNSVHCCVAAVGASLVIPTSGKPGSAERQQHLNRNVGAEGIVR 305
            RDSALPGRDCGDPTTRE                   VGFFLRQFKQTGKVPEALRSLIVFQPKSWARIRKVLLAPPAERIA+PDD+GRILP DSAVVKEAIGSGEGGLRVEVSLKYRRLLVQKLAKSSLITAQEHESF                  S GLEA ATGV GQL+LLESKLN+R S K DD NDGSS VEERLALLLQEFLPRALVVE+CMEDEGEA GHNP+SR DRAWFSRATQ+LRQILDQWKRQRFPAA +EGD PGLGASPEAVAEAILNSVHCCVAAVGASLVIPTSGK G A+RQQ L+RNVGAEG+VR
Sbjct:  711 RDSALPGRDCGDPTTREARTSPPLQIDYVPTLGRHEVGFFLRQFKQTGKVPEALRSLIVFQPKSWARIRKVLLAPPAERIAMPDDNGRILPLDSAVVKEAIGSGEGGLRVEVSLKYRRLLVQKLAKSSLITAQEHESF------------------SPGLEAEATGVAGQLMLLESKLNERASAKSDDVNDGSSGVEERLALLLQEFLPRALVVELCMEDEGEARGHNPESRSDRAWFSRATQILRQILDQWKRQRFPAAGREGDLPGLGASPEAVAEAILNSVHCCVAAVGASLVIPTSGKSGLAKRQQDLDRNVGAEGVVR 1015          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17405.5210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LII6_ECTSI1.830e-17992.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6S2_9PHAE3.550e-15380.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17405contigEcto-sp13_S_contig17405:143..2759 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17405.5210.1mRNA_Ecto-sp13_S_contig17405.5210.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17405 143..2759 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17405.5210.1 ID=prot_Ecto-sp13_S_contig17405.5210.1|Name=mRNA_Ecto-sp13_S_contig17405.5210.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=305bp
KRDSALPGRDCGDPTTREVGFFLRQFKQTGKVPEALRSLIVFQPKSWARI
RKVLLAPPAERIALPDDSGRILPPDSAVVKEAIGSGEGGLRVEVSLKYRR
LLVQKLAKSSLITAQEHESFRNSYVEYLQSQRHQDEAESSGLEAAATGVV
GQLVLLESKLNDRGSVKIDDGNDGSSAVEERLALLLQEFLPRALVVEVCM
EDEGEAGGHNPDSRPDRAWFSRATQLLRQILDQWKRQRFPAASQEGDSPG
LGASPEAVAEAILNSVHCCVAAVGASLVIPTSGKPGSAERQQHLNRNVGA
EGIVR
back to top