prot_Ecto-sp13_S_contig174.5207.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig174.5207.1
Unique Nameprot_Ecto-sp13_S_contig174.5207.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length216
Homology
BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: D8LS98_ECTSI (MsrB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS98_ECTSI)

HSP 1 Score: 392 bits (1008), Expect = 1.410e-137
Identity = 198/215 (92.09%), Postives = 205/215 (95.35%), Query Frame = 0
Query:    1 MDDEIARKGIKEASRELTTRDEYLATRFTKLSKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGVTAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHPLGKPLPVRCQPENYWGSEGQYRAWVLE 215
            MDDEIARKGIKE   ELTTRDEYLATRFTKLSKSQHDLTPFTPSET+AAASHLSPR++A+LFGGA+E DRQSSQARHD     XXXXXXXESRGWRDHRE+GLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGVTAVSCARSRVR+GRVVGDAGSPSGKRYLIRS ALEFHPLGKPLPVRCQPENYWGSEGQYRAWVLE
Sbjct:    1 MDDEIARKGIKE---ELTTRDEYLATRFTKLSKSQHDLTPFTPSETKAAASHLSPRQEAMLFGGAMEDDRQSSQARHDXXXXXXXXXXXXESRGWRDHREKGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGVTAVSCARSRVRLGRVVGDAGSPSGKRYLIRSVALEFHPLGKPLPVRCQPENYWGSEGQYRAWVLE 212          
BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: A0A2W4ME97_9PROT (Peptide methionine sulfoxide reductase MsrB n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4ME97_9PROT)

HSP 1 Score: 86.3 bits (212), Expect = 8.470e-18
Identity = 55/162 (33.95%), Postives = 76/162 (46.91%), Query Frame = 0
Query:   32 SKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV--TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHPLGK 191
            S S +DL P +P+E +A A  LSP ++ V+     E     +   H                     +E GLYAC + GLPLF S  K E       PSF  P D+ H+VE  D  +G+  T + C R    +G V  D   P+ +RY + S +LEFHP G+
Sbjct:    7 SPSGYDLRPLSPAEREALARELSPEERHVILHQGTERPFCGALLHH---------------------KEPGLYACRLCGLPLFNSQTKFESGTG--WPSFHTPFDEAHIVELFDDSHGMRRTEIRCRRCDAHLGHVFDDGPPPTYRRYCLNSVSLEFHPEGR 145          
BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: A0A0D2M0N9_9CHLO (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2M0N9_9CHLO)

HSP 1 Score: 86.3 bits (212), Expect = 3.230e-17
Identity = 59/167 (35.33%), Postives = 79/167 (47.31%), Query Frame = 0
Query:   31 LSKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV---TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHPLGKPLP 194
            +SKS  D+TP T  + Q  A  LS  ++ V      E       A               +   W DH+ +G Y  A+GGLPLF++  K         PSF +P D EH+VE  D          V CA+S   +G V  D  +P+GKRY I +AAL+F P G+PLP
Sbjct:   58 VSKSGFDVTPLTNEQRQQEAEKLSDFQRYVTLNQGTERAFTGRTA---------------DGLPW-DHKGKGTYVSAIGGLPLFSADHKFNSGTG--WPSFYKPVDYEHIVEVVDKSIPFMPRVEVVCAKSGAHLGHVFDDGPAPTGKRYCINAAALKFVPEGEPLP 206          
BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: A0A833LRT8_9GAMM (Peptide methionine sulfoxide reductase MsrB n=1 Tax=Dokdonella sp. TaxID=2291710 RepID=A0A833LRT8_9GAMM)

HSP 1 Score: 83.2 bits (204), Expect = 9.470e-17
Identity = 56/159 (35.22%), Postives = 73/159 (45.91%), Query Frame = 0
Query:   32 SKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV--TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHP 188
            S S HDLTP  P E +  A+ L+P ++ VL     E         H+HG                     G++ACA+  LPLF +  K +       PSF+ P D  HL E  D  +G+  T + CAR    +G V  D   PSG RY + SAALEF P
Sbjct:    5 SASGHDLTPLAPDERERRAARLTPEQRHVLLASGTERPFCGGLL-HEHG--------------------AGVFACALCELPLFAATAKFDSGTG--WPSFSAPFDPAHLRELRDTSHGMIRTEIRCARCDSHIGHVFDDGPPPSGLRYCMNSAALEFRP 140          
BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: A0A2H5XYN4_9BACT (Multifunctional fusion protein n=1 Tax=bacterium HR21 TaxID=2035416 RepID=A0A2H5XYN4_9BACT)

HSP 1 Score: 85.9 bits (211), Expect = 2.520e-16
Identity = 53/166 (31.93%), Postives = 75/166 (45.18%), Query Frame = 0
Query:   36 HDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV--TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHPLGKPLPVRCQP 199
            +D+TP +P E +  A  L P    V      E                         R W +H+E G+YAC V GLPL+ S  K +       PSF++P D EH+    D  +G+  T + C R    +G V  D   P+G+R+ + SAAL F+P G  LP   +P
Sbjct:   15 YDITPLSPEEVRRRAEQLDPESYRVTQRAGTEPP--------------------FCGRFW-NHKEPGIYACVVCGLPLYASQHKFDSGTG--WPSFSQPIDPEHVGRRPDFSHGMVRTELYCVRCGAHLGHVFDDGPPPTGERHCLNSAALRFYPQGAELPPESRP 157          
BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: UPI001FE8506D (peptide-methionine (R)-S-oxide reductase MsrB n=1 Tax=Propylenella binzhouense TaxID=2555902 RepID=UPI001FE8506D)

HSP 1 Score: 81.3 bits (199), Expect = 7.610e-16
Identity = 57/168 (33.93%), Postives = 79/168 (47.02%), Query Frame = 0
Query:   30 KLSKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV--TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHPLG-KPLP 194
            ++S + +DL P + +ET   A  L+P ++ +L                DHG          +S+      ERG+YAC + GLPLF SG K         PSF +P D  H+ E  D   G+  T   C R    +G V  D   P+G RY + SAALEF+P G +P P
Sbjct:   11 RVSATGYDLGPLSAAETDRLAEKLTPEERRILL---------------DHGTERPFCGALLDSK------ERGVYACRLCGLPLFRSGDKFNSGTG--WPSFFQPFDPAHVREIEDRSYGMVRTETRCVRCDSHLGHVFPDGPPPTGLRYCMNSAALEFYPDGTEPKP 155          
BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: A0A7W1AZD7_9HYPH (Peptide methionine sulfoxide reductase MsrB n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7W1AZD7_9HYPH)

HSP 1 Score: 80.9 bits (198), Expect = 1.090e-15
Identity = 56/170 (32.94%), Postives = 79/170 (46.47%), Query Frame = 0
Query:   21 DEYLATRFTKLSKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV--TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHP 188
            DE   T     S S +DL P +P+  +  A  L+  ++ +L                DHG                D++ERG YAC + GLPLF +G K + R     PSF +P D+ H+    D  +G+  T   CAR +  +G V  D   P+G+RY + SAALEF P
Sbjct:    3 DELSTTTSPYTSGSGYDLGPISPAVRERLAERLTSEERHILL---------------DHGTERPFCGVLL------DNKERGTYACRLCGLPLFKAGDKFDSRTG--WPSFFKPFDEAHVRTLEDRSHGMLRTETRCARCKSHLGHVFPDGPPPTGRRYCMNSAALEFFP 149          
BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: A0A4R2IFR6_9GAMM (Peptide methionine sulfoxide reductase MsrB n=3 Tax=Dokdonella fugitiva TaxID=328517 RepID=A0A4R2IFR6_9GAMM)

HSP 1 Score: 80.1 bits (196), Expect = 1.390e-15
Identity = 56/159 (35.22%), Postives = 74/159 (46.54%), Query Frame = 0
Query:   32 SKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV--TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHP 188
            S S HDLTP + +E +  A+ L+P ++ VLF    E         H+HG                     G++AC + GLPLF S  K E       PSF  P D  H+ E  D  +G+  T + CAR    +G V  D   P+G RY + SAALEF P
Sbjct:    4 SASGHDLTPLSAAEREKLAARLTPEERYVLFEHGTERPFCGGLL-HEHGE--------------------GVFACRLCGLPLFRSVTKFESGTG--WPSFHAPFDPAHVREIRDTSHGMVRTEIRCARCDSHLGHVFPDGPPPTGNRYCMNSAALEFVP 139          
BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: A0A2V6Q847_9BACT (Peptide methionine sulfoxide reductase MsrB n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6Q847_9BACT)

HSP 1 Score: 79.0 bits (193), Expect = 5.110e-15
Identity = 57/165 (34.55%), Postives = 74/165 (44.85%), Query Frame = 0
Query:   32 SKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGVTAVS--CARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHPLGKPLP 194
            SKS  DL P TP+  +  A  LS  ++ VL                DHG             G  D+++ G+YAC +  LPLF S  K E       PSF EP D EH+ E  D   G+  V   C R    +G +  D   P+G RY + SA+L+F   G PLP
Sbjct:    5 SKSGFDLGPLTPAMREHLARDLSREERRVLL---------------DHGTEPPFCG------GLLDNKQAGVYACRLCALPLFRSATKFESGTG--WPSFYEPFDAEHITELRDTSYGMERVEIRCKRCDGHLGHLFPDGPRPTGLRYCLNSASLQFVADGAPLP 146          
BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: A0A3M2CGF5_9BACT (Multifunctional fusion protein n=2 Tax=Bacteria TaxID=2 RepID=A0A3M2CGF5_9BACT)

HSP 1 Score: 82.4 bits (202), Expect = 6.730e-15
Identity = 57/193 (29.53%), Postives = 81/193 (41.97%), Query Frame = 0
Query:   30 KLSKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV--TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHPLGKPLPVRCQPEN----------YWGSEGQYR 210
            + SKS +D+TP   +E +  A+ L P    V      E                           + DH+E G+YAC V GLPLF+S  K         PSF    D +H+    D   G+  T + C R    +G V  D   P+G+R+ + SAAL+F P G+ LP   QP            +WG E  ++
Sbjct:   55 RYSKSGYDITPLERAEVERLAAKLDPEAYRVTQRAGTEPPFCGR---------------------FTDHKESGIYACVVCGLPLFSSEHKFHSGTG--WPSFWREFDPDHVTRRPDNSYGMVRTEIVCTRCGAHLGHVFDDGPPPTGERHCLNSAALKFIPEGQALPPESQPVATKVAYFAGGCFWGIEHYFQ 224          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS98_ECTSI1.410e-13792.09MsrB domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A2W4ME97_9PROT8.470e-1833.95Peptide methionine sulfoxide reductase MsrB n=1 Ta... [more]
A0A0D2M0N9_9CHLO3.230e-1735.33Peptide-methionine (R)-S-oxide reductase n=1 Tax=M... [more]
A0A833LRT8_9GAMM9.470e-1735.22Peptide methionine sulfoxide reductase MsrB n=1 Ta... [more]
A0A2H5XYN4_9BACT2.520e-1631.93Multifunctional fusion protein n=1 Tax=bacterium H... [more]
UPI001FE8506D7.610e-1633.93peptide-methionine (R)-S-oxide reductase MsrB n=1 ... [more]
A0A7W1AZD7_9HYPH1.090e-1532.94Peptide methionine sulfoxide reductase MsrB n=1 Ta... [more]
A0A4R2IFR6_9GAMM1.390e-1535.22Peptide methionine sulfoxide reductase MsrB n=3 Ta... [more]
A0A2V6Q847_9BACT5.110e-1534.55Peptide methionine sulfoxide reductase MsrB n=1 Ta... [more]
A0A3M2CGF5_9BACT6.730e-1529.53Multifunctional fusion protein n=2 Tax=Bacteria Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.150.20coord: 43..205
e-value: 8.1E-20
score: 72.6
IPR002579Peptide methionine sulphoxide reductase MrsBPFAMPF01641SelRcoord: 92..188
e-value: 4.1E-13
score: 49.5
IPR028427Peptide methionine sulfoxide reductasePANTHERPTHR10173METHIONINE SULFOXIDE REDUCTASEcoord: 96..189
IPR011057Mss4-like superfamilySUPERFAMILY51316Mss4-likecoord: 93..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig174contigEcto-sp13_S_contig174:18893..23003 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig174.5207.1mRNA_Ecto-sp13_S_contig174.5207.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig174 18646..23003 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig174.5207.1 ID=prot_Ecto-sp13_S_contig174.5207.1|Name=mRNA_Ecto-sp13_S_contig174.5207.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=216bp
MDDEIARKGIKEASRELTTRDEYLATRFTKLSKSQHDLTPFTPSETQAAA
SHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDDDDDDDEESRGWRDHRE
RGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV
TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHPLGKPLPVRCQPE
NYWGSEGQYRAWVLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002579Met_Sox_Rdtase_MsrB
IPR028427Met_Sox_Rdtase
IPR011057Mss4-like_sf