mRNA_Ecto-sp13_S_contig174.5207.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig174.5207.1
Unique NamemRNA_Ecto-sp13_S_contig174.5207.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: D8LS98_ECTSI (MsrB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS98_ECTSI)

HSP 1 Score: 391 bits (1005), Expect = 1.020e-135
Identity = 198/215 (92.09%), Postives = 205/215 (95.35%), Query Frame = 1 
Query:    1 MDDEIARKGIKEASRELTTRDEYLATRFTKLSKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGVTAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHPLGKPLPVRCQPENYWGSEGQYRAWVLE 645
            MDDEIARKGIKE   ELTTRDEYLATRFTKLSKSQHDLTPFTPSET+AAASHLSPR++A+LFGGA+E DRQSSQARHD     XXXXXXXESRGWRDHRE+GLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGVTAVSCARSRVR+GRVVGDAGSPSGKRYLIRS ALEFHPLGKPLPVRCQPENYWGSEGQYRAWVLE
Sbjct:    1 MDDEIARKGIKE---ELTTRDEYLATRFTKLSKSQHDLTPFTPSETKAAASHLSPRQEAMLFGGAMEDDRQSSQARHDXXXXXXXXXXXXESRGWRDHREKGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGVTAVSCARSRVRLGRVVGDAGSPSGKRYLIRSVALEFHPLGKPLPVRCQPENYWGSEGQYRAWVLE 212
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BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: A0A2W4ME97_9PROT (Peptide methionine sulfoxide reductase MsrB n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4ME97_9PROT)

HSP 1 Score: 86.3 bits (212), Expect = 4.510e-17
Identity = 55/162 (33.95%), Postives = 76/162 (46.91%), Query Frame = 1 
Query:   94 SKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV--TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHPLGK 573
            S S +DL P +P+E +A A  LSP ++ V+     E     +   H                     +E GLYAC + GLPLF S  K E       PSF  P D+ H+VE  D  +G+  T + C R    +G V  D   P+ +RY + S +LEFHP G+
Sbjct:    7 SPSGYDLRPLSPAEREALARELSPEERHVILHQGTERPFCGALLHH---------------------KEPGLYACRLCGLPLFNSQTKFESGTG--WPSFHTPFDEAHIVELFDDSHGMRRTEIRCRRCDAHLGHVFDDGPPPTYRRYCLNSVSLEFHPEGR 145
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BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: A0A0D2M0N9_9CHLO (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2M0N9_9CHLO)

HSP 1 Score: 86.3 bits (212), Expect = 1.730e-16
Identity = 59/167 (35.33%), Postives = 79/167 (47.31%), Query Frame = 1 
Query:   91 LSKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV---TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHPLGKPLP 582
            +SKS  D+TP T  + Q  A  LS  ++ V      E       A               +   W DH+ +G Y  A+GGLPLF++  K         PSF +P D EH+VE  D          V CA+S   +G V  D  +P+GKRY I +AAL+F P G+PLP
Sbjct:   58 VSKSGFDVTPLTNEQRQQEAEKLSDFQRYVTLNQGTERAFTGRTA---------------DGLPW-DHKGKGTYVSAIGGLPLFSADHKFNSGTG--WPSFYKPVDYEHIVEVVDKSIPFMPRVEVVCAKSGAHLGHVFDDGPAPTGKRYCINAAALKFVPEGEPLP 206
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BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: A0A833LRT8_9GAMM (Peptide methionine sulfoxide reductase MsrB n=1 Tax=Dokdonella sp. TaxID=2291710 RepID=A0A833LRT8_9GAMM)

HSP 1 Score: 83.2 bits (204), Expect = 4.700e-16
Identity = 56/159 (35.22%), Postives = 73/159 (45.91%), Query Frame = 1 
Query:   94 SKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV--TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHP 564
            S S HDLTP  P E +  A+ L+P ++ VL     E         H+HG                     G++ACA+  LPLF +  K +       PSF+ P D  HL E  D  +G+  T + CAR    +G V  D   PSG RY + SAALEF P
Sbjct:    5 SASGHDLTPLAPDERERRAARLTPEQRHVLLASGTERPFCGGLL-HEHG--------------------AGVFACALCELPLFAATAKFDSGTG--WPSFSAPFDPAHLRELRDTSHGMIRTEIRCARCDSHIGHVFDDGPPPSGLRYCMNSAALEFRP 140
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BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: A0A2H5XYN4_9BACT (Multifunctional fusion protein n=1 Tax=bacterium HR21 TaxID=2035416 RepID=A0A2H5XYN4_9BACT)

HSP 1 Score: 85.9 bits (211), Expect = 1.370e-15
Identity = 53/166 (31.93%), Postives = 75/166 (45.18%), Query Frame = 1 
Query:  106 HDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV--TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHPLGKPLPVRCQP 597
            +D+TP +P E +  A  L P    V      E                         R W +H+E G+YAC V GLPL+ S  K +       PSF++P D EH+    D  +G+  T + C R    +G V  D   P+G+R+ + SAAL F+P G  LP   +P
Sbjct:   15 YDITPLSPEEVRRRAEQLDPESYRVTQRAGTEPP--------------------FCGRFW-NHKEPGIYACVVCGLPLYASQHKFDSGTG--WPSFSQPIDPEHVGRRPDFSHGMVRTELYCVRCGAHLGHVFDDGPPPTGERHCLNSAALRFYPQGAELPPESRP 157
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BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: UPI001FE8506D (peptide-methionine (R)-S-oxide reductase MsrB n=1 Tax=Propylenella binzhouense TaxID=2555902 RepID=UPI001FE8506D)

HSP 1 Score: 81.3 bits (199), Expect = 3.610e-15
Identity = 57/168 (33.93%), Postives = 79/168 (47.02%), Query Frame = 1 
Query:   88 KLSKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV--TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHPLG-KPLP 582
            ++S + +DL P + +ET   A  L+P ++ +L                DHG          +S+      ERG+YAC + GLPLF SG K         PSF +P D  H+ E  D   G+  T   C R    +G V  D   P+G RY + SAALEF+P G +P P
Sbjct:   11 RVSATGYDLGPLSAAETDRLAEKLTPEERRILL---------------DHGTERPFCGALLDSK------ERGVYACRLCGLPLFRSGDKFNSGTG--WPSFFQPFDPAHVREIEDRSYGMVRTETRCVRCDSHLGHVFPDGPPPTGLRYCMNSAALEFYPDGTEPKP 155
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BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: A0A7W1AZD7_9HYPH (Peptide methionine sulfoxide reductase MsrB n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7W1AZD7_9HYPH)

HSP 1 Score: 80.9 bits (198), Expect = 5.140e-15
Identity = 56/170 (32.94%), Postives = 79/170 (46.47%), Query Frame = 1 
Query:   61 DEYLATRFTKLSKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV--TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHP 564
            DE   T     S S +DL P +P+  +  A  L+  ++ +L                DHG                D++ERG YAC + GLPLF +G K + R     PSF +P D+ H+    D  +G+  T   CAR +  +G V  D   P+G+RY + SAALEF P
Sbjct:    3 DELSTTTSPYTSGSGYDLGPISPAVRERLAERLTSEERHILL---------------DHGTERPFCGVLL------DNKERGTYACRLCGLPLFKAGDKFDSRTG--WPSFFKPFDEAHVRTLEDRSHGMLRTETRCARCKSHLGHVFPDGPPPTGRRYCMNSAALEFFP 149
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BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: A0A4R2IFR6_9GAMM (Peptide methionine sulfoxide reductase MsrB n=3 Tax=Dokdonella fugitiva TaxID=328517 RepID=A0A4R2IFR6_9GAMM)

HSP 1 Score: 80.1 bits (196), Expect = 6.400e-15
Identity = 56/159 (35.22%), Postives = 74/159 (46.54%), Query Frame = 1 
Query:   94 SKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV--TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHP 564
            S S HDLTP + +E +  A+ L+P ++ VLF    E         H+HG                     G++AC + GLPLF S  K E       PSF  P D  H+ E  D  +G+  T + CAR    +G V  D   P+G RY + SAALEF P
Sbjct:    4 SASGHDLTPLSAAEREKLAARLTPEERYVLFEHGTERPFCGGLL-HEHGE--------------------GVFACRLCGLPLFRSVTKFESGTG--WPSFHAPFDPAHVREIRDTSHGMVRTEIRCARCDSHLGHVFPDGPPPTGNRYCMNSAALEFVP 139
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BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: A0A2V6Q847_9BACT (Peptide methionine sulfoxide reductase MsrB n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6Q847_9BACT)

HSP 1 Score: 79.0 bits (193), Expect = 2.290e-14
Identity = 57/165 (34.55%), Postives = 74/165 (44.85%), Query Frame = 1 
Query:   94 SKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGVTAVS--CARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHPLGKPLP 582
            SKS  DL P TP+  +  A  LS  ++ VL                DHG             G  D+++ G+YAC +  LPLF S  K E       PSF EP D EH+ E  D   G+  V   C R    +G +  D   P+G RY + SA+L+F   G PLP
Sbjct:    5 SKSGFDLGPLTPAMREHLARDLSREERRVLL---------------DHGTEPPFCG------GLLDNKQAGVYACRLCALPLFRSATKFESGTG--WPSFYEPFDAEHITELRDTSYGMERVEIRCKRCDGHLGHLFPDGPRPTGLRYCLNSASLQFVADGAPLP 146
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BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Match: A0A3M2CGF5_9BACT (Multifunctional fusion protein n=2 Tax=Bacteria TaxID=2 RepID=A0A3M2CGF5_9BACT)

HSP 1 Score: 82.0 bits (201), Expect = 4.710e-14
Identity = 54/172 (31.40%), Postives = 75/172 (43.60%), Query Frame = 1 
Query:   88 KLSKSQHDLTPFTPSETQAAASHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDXXXXXXXESRGWRDHRERGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV--TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHPLGKPLPVRCQP 597
            + SKS +D+TP   +E +  A+ L P    V      E                           + DH+E G+YAC V GLPLF+S  K         PSF    D +H+    D   G+  T + C R    +G V  D   P+G+R+ + SAAL+F P G+ LP   QP
Sbjct:   55 RYSKSGYDITPLERAEVERLAAKLDPEAYRVTQRAGTEPPFCGR---------------------FTDHKESGIYACVVCGLPLFSSEHKFHSGTG--WPSFWREFDPDHVTRRPDNSYGMVRTEIVCTRCGAHLGHVFDDGPPPTGERHCLNSAALKFIPEGQALPPESQP 203
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig174.5207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS98_ECTSI1.020e-13592.09MsrB domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A2W4ME97_9PROT4.510e-1733.95Peptide methionine sulfoxide reductase MsrB n=1 Ta... [more]
A0A0D2M0N9_9CHLO1.730e-1635.33Peptide-methionine (R)-S-oxide reductase n=1 Tax=M... [more]
A0A833LRT8_9GAMM4.700e-1635.22Peptide methionine sulfoxide reductase MsrB n=1 Ta... [more]
A0A2H5XYN4_9BACT1.370e-1531.93Multifunctional fusion protein n=1 Tax=bacterium H... [more]
UPI001FE8506D3.610e-1533.93peptide-methionine (R)-S-oxide reductase MsrB n=1 ... [more]
A0A7W1AZD7_9HYPH5.140e-1532.94Peptide methionine sulfoxide reductase MsrB n=1 Ta... [more]
A0A4R2IFR6_9GAMM6.400e-1535.22Peptide methionine sulfoxide reductase MsrB n=3 Ta... [more]
A0A2V6Q847_9BACT2.290e-1434.55Peptide methionine sulfoxide reductase MsrB n=1 Ta... [more]
A0A3M2CGF5_9BACT4.710e-1431.40Multifunctional fusion protein n=2 Tax=Bacteria Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig174contigEcto-sp13_S_contig174:18646..23003 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeViridiplantae
Stop1
Start1
Seed ortholog score91.7
Seed ortholog evalue4.6e-16
Seed eggNOG ortholog3075.A0A087SGC0
Preferred nameMSRB1
Model size895
KEGG koko:K07305
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0016491,GO:0016667,GO:0016671,GO:0033743,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0055114
Exons6
EggNOG free text desc.methionine sulfoxide reductase
EggNOG OGs37I4S@33090,COG0229@1,KOG0856@2759
Ec32 ortholog descriptionPeptide methionine sulphoxide reductase MrsB
Ec32 orthologEc-12_004320.1
EC1.8.4.12
Cds size648
COG Functional cat.O
Best tax levelViridiplantae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig174.5207.1prot_Ecto-sp13_S_contig174.5207.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig174 18893..23003 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462907.8505943-UTR-Ecto-sp13_S_contig174:18645..188921681462907.8505943-UTR-Ecto-sp13_S_contig174:18645..18892Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig174 18646..18892 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462907.8662684-CDS-Ecto-sp13_S_contig174:18892..190131681462907.8662684-CDS-Ecto-sp13_S_contig174:18892..19013Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig174 18893..19013 -
1681462907.8757753-CDS-Ecto-sp13_S_contig174:19562..197001681462907.8757753-CDS-Ecto-sp13_S_contig174:19562..19700Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig174 19563..19700 -
1681462907.885609-CDS-Ecto-sp13_S_contig174:20241..203341681462907.885609-CDS-Ecto-sp13_S_contig174:20241..20334Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig174 20242..20334 -
1681462907.8954535-CDS-Ecto-sp13_S_contig174:20843..210041681462907.8954535-CDS-Ecto-sp13_S_contig174:20843..21004Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig174 20844..21004 -
1681462907.9033387-CDS-Ecto-sp13_S_contig174:21459..215491681462907.9033387-CDS-Ecto-sp13_S_contig174:21459..21549Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig174 21460..21549 -
1681462907.9109566-CDS-Ecto-sp13_S_contig174:22958..230031681462907.9109566-CDS-Ecto-sp13_S_contig174:22958..23003Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig174 22959..23003 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig174.5207.1

>prot_Ecto-sp13_S_contig174.5207.1 ID=prot_Ecto-sp13_S_contig174.5207.1|Name=mRNA_Ecto-sp13_S_contig174.5207.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=216bp
MDDEIARKGIKEASRELTTRDEYLATRFTKLSKSQHDLTPFTPSETQAAA
SHLSPRKKAVLFGGAIEVDRQSSQARHDHGNVDDDDDDDEESRGWRDHRE
RGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGV
TAVSCARSRVRVGRVVGDAGSPSGKRYLIRSAALEFHPLGKPLPVRCQPE
NYWGSEGQYRAWVLE*
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mRNA from alignment at Ecto-sp13_S_contig174:18646..23003-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig174.5207.1 ID=mRNA_Ecto-sp13_S_contig174.5207.1|Name=mRNA_Ecto-sp13_S_contig174.5207.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4358bp|location=Sequence derived from alignment at Ecto-sp13_S_contig174:18646..23003- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACGACGAGATCGCTCGCAAGGGAATCAAAGAGGCAAGCAGAGTCCA
CCCACACCATAATTAGGCAGTTCTCCCAATGAGCCACACGCATGGCCTTC
GCTCCCTGTATATCTTCTATACGCTTCATCATCCTTTTGGGCCCCGGTTG
AACTAAAGGGTTTCAAGCTTTGCATCATTGAAGCCAGTACGAGTTTTTCC
CAAACCCTGCATTCTGCACAGGTTTCCTATTGCAGCACACATGTGATGTG
CGTTCCACTCTTGTTGCGACGGACTCTCCCTTCCCTTCCGCGCATTGTTT
CTTTGCCAAGAGTCAACCCTTCCTAGAGAATATGAGTTTAGCGTACTCCT
ACACACGCATCGAACAGCAGTAGGTAGACTCGCGGACGGCGAGAGCTTCT
GTCGGCAAATTTTGAATGTACCAGGACAGACTGTCAAGTAATTACGCGGG
TGAAGCCCGTCAATACACGGTGACACCCATTCATCTGCGGGCCACGCGCT
TTCAAAATGTTGCACCTCACTCAATGAATCAATAGAGGAAAGGAGACGCC
AGAGCAGAGGTGCCGTCACTTGGGCAGCAAAGAAATCACCGTGCATATAT
TCTGCCATGCGGGTCGGCAACATACCGACGCGTCGGGATGGACGATTCAT
GGCGATTGCTTCGGGTGGGGTGTTCACTGCAAAGAACCTACAGAAAGATG
GAGTCACAGAGAGCGAAAAAGAACAACGCGGAGGTGCCAGAGCATCATCA
TCATGTTACTTGAAGTGTTCTGGCGAGAGGACGGGCGTGCATATGATATG
AAAGCATGCATGGGTCCCTGGGTGTGAGTACTGCTGCTATGCTGCATTAG
CTCGACAAAAATATTCGCGTGTTTGTGCGTGCGTGCGTGTTTGTGCGATC
TCCTCTCTCCTCGCTGTATGTAGCTCTTCTGGCGGGTGCTGCTGCGTGCT
CGCCATCTCACACTCAGTGTGGATTGACATTGCGAAACTTCGTGCACACA
GAGACCAGAGTGGTCTCTTCTGCTGTTGGCGTCTGGTATGCGCCAGTTAC
AGCGCCCAGGCTCCCGCCTGATGTGTGTCGGTCTCTGAACTGGTTAGTTC
GAATGCGGTCCGCGCCGAAGAAAAAGCGGCGTAATTGCCAAAATTACTCG
GAAATAGACAAGACGTCAAGCAGGCGCCAAGTGAAATGGAGACGCCGATT
GGCGGACGTGAAGTGAAATCTGTCCCGGTTGCTTTATTTACTGCCCTTCT
GTCTCAGATCTGAAGAGAAAAAACATTATGGATGAACGTTACACTGGCCG
CTTGTTGAAATGTTGTGGAAACATCCCTAGAGACCAGAACGGCCACATGA
ATTACGTTATCTTGTTCTCTCATTTCCCCCACCCCCCACCCCCCACCCCT
TGACCCGTGCTGACCGCTGCCGCACCCGCCGTTGATTGATACGCTCTCTT
CCAGGAGCTCACAACTCGAGATGAGTACCTCGCAACGAGGTTCACGAAGC
TGTCCAAAAGTCAGCATGACCTGACGCCTTTCACCCCATCAGAGGTGAGA
TGGTTCACACTTTTTTTTTTCTCAGCGACGTTGTTAAGCGCGAAGGCAGA
TTTCGATTGTATACACGTACGTACGTGCTTGCATCCAAACATGAGTACCT
CTTCCGCTAATCCAGCCGGCCACCGCAAGATCCAACCCGCGACCTATTTC
CTCGCAGTAATGATCGAAATCACATGGCCTTACCCTACCAACGAGTAGCA
ACAGGGTTGTGTTCATGAAGCTACTCGCCCACTATTTGTCAGAGGTACTC
GTGCAGCGAGTATCTTGCCCAGCAGCAGCTACTCCACGTCCTTCCCCTCT
CTTTGCCGCTTTGTGTAGCTGGAGCACCAACTAGCTTTTCAACCCGCCTG
CCATGCTCTACGCCGGGGTCCTCACCGACGCTGTTTTTGGGTTTGTCCGC
GCCGTCCCTTCCTCGTACGTCGCGTTTCACACCCTGTTGATCCGAAAAGA
CGCAAGCGGCGGCCTCTCATCTGTCGCCCAGAAAAAAGGCGGTGCTGTTC
GGAGGCGCCATTGAAGTCGACAGACAAAGCTCTCAAGCTCGGCACGATCA
CGGCAACGTCGACGACGACGACGACGACGATGAAGAAAGTCGAGGCTGGC
GCGACCATAGGTGAAAAAGAGAAGATGAGTCAGTGCAGGCGCGCTCCCAC
GTTGCCCCAGCAGTACTTTCGGCGGCGTGTTGCGGGCAAGATCGGCAGGG
CGAAGGAGCCTGCTGGGCTAGGTATCGAAAAGGCAATCTCTCGTGGGGGA
CTGAGAGCAAGATCGCCGTTCCCGAGAAAAAGTTTTGCTTTCTCAGTGAT
GGCCGCTGCAAGCACTTTTTTTGTTCGGGGGGCGGGGGGGCGGGGGAGGG
TCCCACAGCCCTGGCCAGTGCGGTGCGTGTATTTGTGCTTGAACGTTCCG
CGGGCCGGCATGGTGGTGATAAAAGAAAGAGGAAATGGAAGTGTTTGGCT
AGCAAGACGAGAAGCAAGTACGAGACTCGACGCATACAACGCCCTCGGAA
ATGGTTCACGCCGTGATGTCAAAAACATTGTACCCTCTCATGGCCGTTAT
TTCCTTCTCTCCTCGTTCGTGCCCTTCGATGACGGGCGGTTTGTTCGGGG
GGGTTGTTTTCGACAAAAGGGAGAGGGGCCTCTACGCGTGCGCCGTGGGA
GGTCTGCCCCTCTTCACCTCCGGTTGGAAATTGGAGCCTAGAGCAGAGGA
CGACTGTCCAAGGTGAACAAGGGGGCGTCATATCTCATAGCACTGCAACA
GCCTCGGGTCGATCAAGTCGCCACAAATCTCTCTTCGTCGTGGGGAAGAG
TTGCGTGCTGTTCATGATGTGAAGAACTTCTTGCTGTCTGTGCGTGCTGT
TCATGAAATTGGGAACACAAATGTTTTTCTCTGGCACGCAATTCGTTGAC
CAATCAGCGAACTGCGTGCCACAAATGTTTTTCTCTCTTTTTCTCTCTGC
CACAAACGTTTTTCTCCCTGTTTTTCTCTTGTGCACGCAGTACTTGCTGT
CTGTTCTCCTCCGCGGGGCGCGTTCCACAGGCTTTGGCCTCACTCTTACC
ATCTAAGGCCACTCAAGATTTTCAAACTTACCCACCACCCCACTCTGAGT
TGTCTCGTCATCGCGGCGCTGCGTCCGCTCTGCGGCGCCACTTCTGACCG
CCAGCCTGATCAAAAGCCGTGCTACCCGTCCGCGCCACATTCTTATTTAT
GACCACGTCCACTCACACGCGCATGACGGCCTGCCACATCCGCGGTTTTC
CAGCTTTGCGGAGCCCTGCGATGACGAGCACTTGGTCGAGGAGCACGACG
CCGAGAACGGGGTGACTGCTGTCTCGTGTGCGCGGTCGCGGGTGCGCGTT
GGCAGAGTAGTGGGCGATGCGGGGTCGCCTTCCGGCAAGAGGTGCGAGAG
GTGCACAACAGGGGTGGCAGGCAGGCACCGCGGTCCGTATCTACGATACT
TCCGATCAGACCATAGGGGCGCCGTTCTTAAGCTCGTACAGTGAAACGGT
ATTTTCCTCGTGAAATCGAGTGTCGCGTGAGAGGGTGGTGGATGGCCGTT
TTGGAGCGAGATTTCCCCCCCCCTGCCGCATGTTACGATTGACCGTCGAC
AGCTTTAACTTGACGAGCGTTTCGCCGCTCAAGCTAGTCAGCGAAAGTAG
CGCGGTGGCCGTGGTGACAGCAGTTGCAAGGTACCGCGGACGGTGGAAAC
GTCACGGTTAAGCTTGTCACCTTAGGCGCTCGAACTACGGACAGCCAACC
TCCCCATGTTGCCCCGCCCAACTGCTGAGAATGTAAGTGTTGCTTCCTCC
GTGCCAATATACCGGTGCACGGCCGGTGCCTTCCTTCCCGCTATACGGTC
AGGGTAGGGACCCGCTTGTACTTGCCCTTATCCTTCCGCACCGTCGTGCT
CTCGCCCCGCCCCCGCTCCCTCTTGTGGGACCAAAAAAAGGTACCTTATT
CGCAGCGCGGCGCTAGAGTTCCACCCGCTCGGGAAGCCGCTGCCGGTGCG
CTGCCAGCCGGAAAACTACTGGGGATCAGAGGGACAGTATCGTGCGTGGG
TGCTGGAGTGACGTCACGGGGAATAGAGAGCTTCGGCGATTTTGCGTGCT
TCTCCGAAGCGCCGATGTTCCCGGACGCCCGGCTTGTAAATAAAGTTGTG
TGTGTATACAGGGCAGTTGCGTGTCGCCGTCACTTAGAGGGCCCCGGTTT
CCCTGCGGTAGAGAGACAGGAGAGAGTGTTTGCTGTGAATGTGTCCTACC
GTAATCTCAAGCTTGTAATAGAGTCGGAACAGCACGCCTGGGCAGGAAGC
GCGGGAAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig174:18646..23003-

>mRNA_Ecto-sp13_S_contig174.5207.1 ID=mRNA_Ecto-sp13_S_contig174.5207.1|Name=mRNA_Ecto-sp13_S_contig174.5207.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=648bp|location=Sequence derived from alignment at Ecto-sp13_S_contig174:18646..23003- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACGACGAGATCGCTCGCAAGGGAATCAAAGAGGCAAGCAGAGAGCT
CACAACTCGAGATGAGTACCTCGCAACGAGGTTCACGAAGCTGTCCAAAA
GTCAGCATGACCTGACGCCTTTCACCCCATCAGAGACGCAAGCGGCGGCC
TCTCATCTGTCGCCCAGAAAAAAGGCGGTGCTGTTCGGAGGCGCCATTGA
AGTCGACAGACAAAGCTCTCAAGCTCGGCACGATCACGGCAACGTCGACG
ACGACGACGACGACGATGAAGAAAGTCGAGGCTGGCGCGACCATAGGGAG
AGGGGCCTCTACGCGTGCGCCGTGGGAGGTCTGCCCCTCTTCACCTCCGG
TTGGAAATTGGAGCCTAGAGCAGAGGACGACTGTCCAAGCTTTGCGGAGC
CCTGCGATGACGAGCACTTGGTCGAGGAGCACGACGCCGAGAACGGGGTG
ACTGCTGTCTCGTGTGCGCGGTCGCGGGTGCGCGTTGGCAGAGTAGTGGG
CGATGCGGGGTCGCCTTCCGGCAAGAGGTACCTTATTCGCAGCGCGGCGC
TAGAGTTCCACCCGCTCGGGAAGCCGCTGCCGGTGCGCTGCCAGCCGGAA
AACTACTGGGGATCAGAGGGACAGTATCGTGCGTGGGTGCTGGAGTGA
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