prot_Ecto-sp13_S_contig17376.5191.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17376.5191.1
Unique Nameprot_Ecto-sp13_S_contig17376.5191.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length491
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17376.5191.1 vs. uniprot
Match: D8LIM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIM1_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 1.590e-33
Identity = 71/77 (92.21%), Postives = 71/77 (92.21%), Query Frame = 0 
Query:  397 MESDLDFIRELTRYRSGAERAARNDEYEFALVLNPNDEYRDAVEVLELALDLGDGGGGVTTSPQKLDKAKRVRESLG 473
            MESDLDFIRELTRYRSGAERAARNDEYEFALVLNPNDEYRDAVEVLELALDLGDGGGGVTTSPQKLDK KR     G
Sbjct:    1 MESDLDFIRELTRYRSGAERAARNDEYEFALVLNPNDEYRDAVEVLELALDLGDGGGGVTTSPQKLDKVKRSGPGSG 77
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17376.5191.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIM1_ECTSI1.590e-3392.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 465..485

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17376contigEcto-sp13_S_contig17376:306..2497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17376.5191.1mRNA_Ecto-sp13_S_contig17376.5191.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17376 306..2497 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17376.5191.1 ID=prot_Ecto-sp13_S_contig17376.5191.1|Name=mRNA_Ecto-sp13_S_contig17376.5191.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=491bp
QPTESLQARRGEDSDTTPTFSSSNATNRPSFLNAYNAKQEDDDDEDRMGP
GFLRGPTSYNSPTTPLSSRSASPPPSPPRSLTPRQPAGPPPASPCGAPRG
FRADGILRRSARDSGSSTTARAGGDGDDVAAVRVGEVPPSPAGTTDGVEW
PGVKHVAQSAATSPNGGGGGISACSSPAPVKPPPLPPHNSKLPSSLPIPP
PETPRALEDGGVDSTTTTATASAFSFSHEATSTSTAGVSSSSSPRPPPTP
PRGFRPGEAASSSQRLVSSPTSSSPAAAASSPASPPRVMSSPPSSSSLAL
SPTTTTATTSPAARATAAAAAASPTEGKGAGGAASSLGADDLPTPPPKMY
SSRQLQQQQQQQQQQQRFSSQRGSSFKVKSGGGGSPVVGGGGNEDAMESD
LDFIRELTRYRSGAERAARNDEYEFALVLNPNDEYRDAVEVLELALDLGD
GGGGVTTSPQKLDKAKRVRESLGGLQEQQQQQQQQRSSPDR
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