prot_Ecto-sp13_S_contig17357.5182.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17357.5182.1 vs. uniprot
Match: D8LGI0_ECTSI (SFM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGI0_ECTSI) HSP 1 Score: 119 bits (297), Expect = 4.430e-28 Identity = 91/100 (91.00%), Postives = 93/100 (93.00%), Query Frame = 0
Query: 1 SPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGIAWHPEAYSSDKTLLATGAADKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRYMGTAS 100
SPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTG+ WHPEAYSSDKTLLA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRY+GTAS
Sbjct: 272 SPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPEAYSSDKTLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRYLGTAS 371
BLAST of mRNA_Ecto-sp13_S_contig17357.5182.1 vs. uniprot
Match: D8LGJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ1_ECTSI) HSP 1 Score: 68.9 bits (167), Expect = 7.410e-13 Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 0
Query: 21 IENLEMRKVLRGHSERVTGIAWHPEAYSSDKTLLATGAADK 61
+++LEM+KVLR HSERVTG+AW PEA+ SDKTLLATGAADK
Sbjct: 2 LKSLEMQKVLRRHSERVTGVAWPPEAHFSDKTLLATGAADK 42
BLAST of mRNA_Ecto-sp13_S_contig17357.5182.1 vs. uniprot
Match: M4B2G3_HYAAE (SFM domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2G3_HYAAE) HSP 1 Score: 71.2 bits (173), Expect = 2.230e-11 Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 0
Query: 1 SPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGIAWHP-EAYSS-----DKTLLATGAAD 60
S DGG VA+GSW+ LVK+WD N KV RGH +RVTG+AWHP +A+S D L +G+AD
Sbjct: 255 SADGGHVATGSWSSLVKVWDATNANEVKVFRGHEDRVTGVAWHPTKAFSEMTDSGDSVCLCSGSAD 320
BLAST of mRNA_Ecto-sp13_S_contig17357.5182.1 vs. uniprot
Match: A0A3F2S1S9_9STRA (SFM domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1S9_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 5.140e-10 Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 0
Query: 1 SPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGIAWHPEAYSSDKT------LLATGAAD 60
S DG VA+GSW+ LVK+WD N KV RGH +RVTG+AWHP S+ T L +G+AD
Sbjct: 259 SADGAHVATGSWSSLVKVWDATNAAEIKVFRGHEDRVTGVAWHPNNTFSEMTDGTDSVCLCSGSAD 324
BLAST of mRNA_Ecto-sp13_S_contig17357.5182.1 vs. uniprot
Match: A0A2P4X876_9STRA (U4/U6 small nuclear ribonucleoprotein Prp4 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X876_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 7.900e-10 Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 0
Query: 1 SPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGIAWHPEAYSSDKT------LLATGAAD 60
S DG VA+GSW+ LVK+WD + KV RGH +RVTG+AWHP S+ T L +G+AD
Sbjct: 257 SADGNHVATGSWSSLVKVWDASSANEVKVFRGHEDRVTGVAWHPNNVFSEMTDGADSVCLCSGSAD 322
BLAST of mRNA_Ecto-sp13_S_contig17357.5182.1 vs. uniprot
Match: A0A2P6V6K8_9CHLO (U4 U6 small nuclear ribonucleo PRP4 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V6K8_9CHLO) HSP 1 Score: 66.2 bits (160), Expect = 1.200e-9 Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0
Query: 1 SPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGIAWHPEAYSSDK----TLLATGAAD 60
SPDG +A+G+W+ +KLW + +L R + H+ERVTG+AWHPEA ++ + LATGA D
Sbjct: 226 SPDGTQLATGAWSGTLKLWSMPSLTKRLTVNAHAERVTGVAWHPEASTTGRMEEAVTLATGATD 289
BLAST of mRNA_Ecto-sp13_S_contig17357.5182.1 vs. uniprot
Match: S9VU57_SCHCR (U4/U6 X U5 tri-snRNP complex subunit Prp4 family protein n=1 Tax=Schizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691) TaxID=653667 RepID=S9VU57_SCHCR) HSP 1 Score: 65.5 bits (158), Expect = 2.150e-9 Identity = 29/62 (46.77%), Postives = 44/62 (70.97%), Query Frame = 0
Query: 3 DGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGIAWHPEAYS----SDKTLLATGAAD 60
DG T A+GSW+ VK+WD ++L ++ RGH+++V+G+ WHP+ + S+K LATGAAD
Sbjct: 188 DGDTFATGSWSGQVKVWDTKDLSQVRLYRGHTDKVSGLDWHPDCTTWDETSEKICLATGAAD 249
BLAST of mRNA_Ecto-sp13_S_contig17357.5182.1 vs. uniprot
Match: T0QUF2_SAPDV (SFM domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QUF2_SAPDV) HSP 1 Score: 65.5 bits (158), Expect = 2.200e-9 Identity = 27/60 (45.00%), Postives = 45/60 (75.00%), Query Frame = 0
Query: 1 SPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGIAWHPEAYSSDKTLLATGAAD 60
SPD +A+GSW+ VK+W+ ++ ++ L GH++R+TG+AWHP A +++ +LA+GAAD
Sbjct: 229 SPDASLLATGSWSSNVKIWNSKSCDLVHTLTGHTDRITGLAWHP-ASTTESPILASGAAD 287
BLAST of mRNA_Ecto-sp13_S_contig17357.5182.1 vs. uniprot
Match: R1CZ92_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZ92_EMIHU) HSP 1 Score: 64.7 bits (156), Expect = 4.050e-9 Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 0
Query: 1 SPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGIAWHPEA--YSSDKTLLATGAAD 60
+P GGT A+GSW+ ++KLW + + LRGH+ER++G+AWHP+A SS + L + D
Sbjct: 233 APGGGTCATGSWSSVIKLWSVPDCTQVATLRGHTERISGLAWHPQADKRSSGEAALVSAGCD 294
BLAST of mRNA_Ecto-sp13_S_contig17357.5182.1 vs. uniprot
Match: A0A2P6TBB7_CHLSO (U4 U6 small nuclear ribonucleo PRP4 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TBB7_CHLSO) HSP 1 Score: 64.3 bits (155), Expect = 5.590e-9 Identity = 27/64 (42.19%), Postives = 45/64 (70.31%), Query Frame = 0
Query: 1 SPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGIAWHPEAYSSDK----TLLATGAAD 60
SPDG +A+G+W+ +K+W + +L+ + ++ H+ERVTG+AWHPEA ++ + LA+GA D
Sbjct: 227 SPDGSQLATGAWSGTLKVWAMPSLQKQLTIKAHAERVTGVAWHPEASTTGRMEAAVTLASGATD 290 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17357.5182.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig17357.5182.1 ID=prot_Ecto-sp13_S_contig17357.5182.1|Name=mRNA_Ecto-sp13_S_contig17357.5182.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=166bpback to top |