prot_Ecto-sp13_S_contig17353.5181.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17353.5181.1
Unique Nameprot_Ecto-sp13_S_contig17353.5181.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length301
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17353.5181.1 vs. uniprot
Match: A0A6H5K5T9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T9_9PHAE)

HSP 1 Score: 466 bits (1200), Expect = 5.540e-164
Identity = 261/300 (87.00%), Postives = 267/300 (89.00%), Query Frame = 0 
Query:    1 MTNQANPRQKRKATKXXXXXXXXXXXXXXXXVPEADPIQEYWSRKISPGKRRVEFKGGGPGGVTVLRKDVPKFWRTVKNRKGVCCVYFVKGERHFLTMVSEKELNKMKGTIGNLEMTNHAKTLAYGIKAAKKRKGVPNFSVVDACFGFWFDVCKDSGVEFKWKSCANYFNTGSGQSTRQLATKQEKSLLAALDTVSAIPKDSEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPIEVRIVGKRIKVFWEEFNRWYRGKVVKFSHGMHLIYYDDGDKASHALKNEKWKVVG 300
            MT QANPR+K K TK                VPEADPIQEYWSRKISPGKRRVEFKGGGPGGVTVLRKDVPK WRTVKNRKGVCCVYFVKGERHFLTMVSEKELNK+KGTIG+LEMTNHAKTLAYG+KAAKKRKGVPNFSVVDACFGFWFDVCKDSGVEFKWKSCANYFNTGSG+STRQLA KQEKSLLAALDTVSAIPKDSEPXXXXXXXXXXXXXXX          XXXXXXXXXXXXX P EVRIVGKRIKVFWEEFNRWYRGKVVKFS+GMHLIYYDDGDKASHALKNEKWKVVG
Sbjct:    1 MTKQANPRKKHKTTKAKAWANKKATPRPRPRVPEADPIQEYWSRKISPGKRRVEFKGGGPGGVTVLRKDVPKSWRTVKNRKGVCCVYFVKGERHFLTMVSEKELNKIKGTIGSLEMTNHAKTLAYGMKAAKKRKGVPNFSVVDACFGFWFDVCKDSGVEFKWKSCANYFNTGSGRSTRQLAKKQEKSLLAALDTVSAIPKDSEPXXXXXXXXXXXXXXXSVINLSEESSXXXXXXXXXXXXXEPFEVRIVGKRIKVFWEEFNRWYRGKVVKFSNGMHLIYYDDGDKASHALKNEKWKVVG 300
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BLAST of mRNA_Ecto-sp13_S_contig17353.5181.1 vs. uniprot
Match: D8LEB9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB9_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 8.720e-60
Identity = 115/205 (56.10%), Postives = 124/205 (60.49%), Query Frame = 0 
Query:    1 MTNQANPRQKRKATKXXXXXXXXXXXXXXXXVPEADPIQEYWSRKISP--GKRRVEFKGGGPGGVTVLRKDVPKFWRTVKNRKGVCCVYFVKGERHFLTMVSEKELNKMKGTIGNLEMTNHAKTLAYGIKAAKKRKGVPNFSVVDACFGFWFDVCKDSGVEFKWKSCANYFNTGSGQSTRQLATKQEKSLLAALDTVSAIPKDSE 203
            MT QANPR K KA K                VPEADPIQEYWSR ISP  G   V+FKGGGPGGVTVLRKDVP+ WR V NRK                                                AKKRKGVPNFSVVDACFGFWFDVCKD G+E+K+KSCANYFN G+G++TRQLA +QEKSLLAAL TVSAIPKDSE
Sbjct:    1 MTKQANPRNKPKAEKAAKKKFTTRPRNR---VPEADPIQEYWSRIISPRDGHVEVQFKGGGPGGVTVLRKDVPRLWRNVNNRK------------------------------------------------AKKRKGVPNFSVVDACFGFWFDVCKDDGLEYKFKSCANYFNDGTGRTTRQLAKEQEKSLLAALHTVSAIPKDSE 154
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BLAST of mRNA_Ecto-sp13_S_contig17353.5181.1 vs. uniprot
Match: A0A5K1GN35_9MAGN (Uncharacterized protein (Fragment) n=2 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1GN35_9MAGN)

HSP 1 Score: 58.2 bits (139), Expect = 8.830e-6
Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = 0 
Query:  247 VRIVGKRIKVFWEEFNRWYRGKVVKFSHG--MHLIYYDDGDKASHALKNEKWKV 298
            +RIVG+R+KV+W    +WY G VV F H   +H I YDDG++    L+NEK++V
Sbjct:  121 IRIVGRRVKVYWPLDRKWYAGHVVSFEHDKKIHQIRYDDGEEEWLVLENEKFEV 174
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17353.5181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K5T9_9PHAE5.540e-16487.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEB9_ECTSI8.720e-6056.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5K1GN35_9MAGN8.830e-648.15Uncharacterized protein (Fragment) n=2 Tax=Nymphae... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 248..293
e-value: 2.1E-7
score: 32.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17353contigEcto-sp13_S_contig17353:553..2084 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17353.5181.1mRNA_Ecto-sp13_S_contig17353.5181.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17353 467..2306 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17353.5181.1 ID=prot_Ecto-sp13_S_contig17353.5181.1|Name=mRNA_Ecto-sp13_S_contig17353.5181.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=301bp
MTNQANPRQKRKATKAKARANKNATPRPRPRVPEADPIQEYWSRKISPGK
RRVEFKGGGPGGVTVLRKDVPKFWRTVKNRKGVCCVYFVKGERHFLTMVS
EKELNKMKGTIGNLEMTNHAKTLAYGIKAAKKRKGVPNFSVVDACFGFWF
DVCKDSGVEFKWKSCANYFNTGSGQSTRQLATKQEKSLLAALDTVSAIPK
DSEPDSEIDSESDSESDSGSVIDLSDESSSEESDSASDSESDGPIEVRIV
GKRIKVFWEEFNRWYRGKVVKFSHGMHLIYYDDGDKASHALKNEKWKVVG
*
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