prot_Ecto-sp13_S_contig1733.5174.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1733.5174.1
Unique Nameprot_Ecto-sp13_S_contig1733.5174.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length124
Homology
BLAST of mRNA_Ecto-sp13_S_contig1733.5174.1 vs. uniprot
Match: D7FUQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUQ1_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 8.500e-38
Identity = 74/106 (69.81%), Postives = 80/106 (75.47%), Query Frame = 0
Query:   22 QVGPGPKEALWKLSRRPPVAPQPKSEGAWVGSVKLRPRRGWAAGSMDERLPRRPAAKSVVCRRIFE----AGLSSPIRAEDEGCSAFPLPSRTRARVARDLGGICA 123
            +V PGP+EALWKL RR PVA QPK EGA VGSVK RPRRG AAGS++ERLPRRPAA+SVV  R F+     G   P      GCSAFPLPSRTRARVARDLGG CA
Sbjct:  212 EVWPGPEEALWKLRRRLPVAAQPKLEGARVGSVKPRPRRGRAAGSIEERLPRRPAARSVVYLRTFKDTAKRGFLHPFVRRKRGCSAFPLPSRTRARVARDLGGNCA 317          
BLAST of mRNA_Ecto-sp13_S_contig1733.5174.1 vs. uniprot
Match: A0A6H5KEJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEJ2_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 2.260e-29
Identity = 80/186 (43.01%), Postives = 90/186 (48.39%), Query Frame = 0
Query:    1 EERLSRRPAARSVAYRRAFE--------------------------------------------------------------VQVGPGPKEALWKLSRRPPVAPQPKSEGAWVGSVKLRPRRGWAAGSMDERLPRRPAAKSVVCRRIFEAGLSS---PIRAEDEGCSAFPLPSRTRARVARDLGGI 121
            EERLSRRPAARSV YRRAFE                                                              ++VGPGP+EALWKL RRPPVAPQPKSEGA VGSVK RPRRG AAGSM+ERLPRRPA +SV+  R FE G  +    +  E+E     P      A V    GG+
Sbjct:  182 EERLSRRPAARSVVYRRAFEGGAGTGGGSVEIGPPQPKSEGARVGSVKPSRANGPGGGGRRAACRRGSCGGPWSEAWSTGGLLKVGPGPEEALWKLRRRPPVAPQPKSEGARVGSVKPRPRRGRAAGSMEERLPRRPAVRSVLYGRTFEGGAGTGGDSVEIEEEATGGAP------AEVGGGEGGV 361          
BLAST of mRNA_Ecto-sp13_S_contig1733.5174.1 vs. uniprot
Match: D7FMZ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ2_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 9.560e-27
Identity = 62/111 (55.86%), Postives = 74/111 (66.67%), Query Frame = 0
Query:    1 EERLSRRPAARSVAYRRAFEVQVGPGPKEALWKLSRRPPVAPQPKSEGAWVGSVKLRPRRGWAAGSMDERLPRRPAAKSVVCRRIFEAGLSSPIRAEDEGCSAFPLPSRTR 111
            EERL RRP  R V   +AFE  VGPGP+E LWKL R PPVAP+ + EGA +GS+K RPRRG  AG M+ERL RRP  +SVV RR FE GL+   R+   G   F +P+  R
Sbjct:    2 EERLLRRPTVRRVLSLKAFEKWVGPGPEEPLWKLRRTPPVAPRRELEGARLGSIKPRPRRGPVAGRMEERLSRRPVTRSVVYRRAFE-GLAFITRSCG-GRGLFGVPATLR 110          
BLAST of mRNA_Ecto-sp13_S_contig1733.5174.1 vs. uniprot
Match: A0A6H5L0N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N7_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 4.510e-15
Identity = 48/87 (55.17%), Postives = 53/87 (60.92%), Query Frame = 0
Query:    1 EERLSRRPAARSVAYRRAFEVQVGPGPKEALWKLSRRPPVAPQPKSEGAWVGSVKLRPRRGWAAGSMDERLPRRPAAKSVVCRRIFE 87
            EERLSRRPAARSV YRRAFE   G G      +             E A VGSVK RPRRG AAGSM+ERLPRRP  +S++  R  E
Sbjct:   18 EERLSRRPAARSVVYRRAFEGGAGTGGGSVEIE-------------EAARVGSVKPRPRRGGAAGSMEERLPRRPVVRSMLHLRASE 91          
BLAST of mRNA_Ecto-sp13_S_contig1733.5174.1 vs. uniprot
Match: A0A6H5JF72_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF72_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 3.310e-12
Identity = 43/87 (49.43%), Postives = 53/87 (60.92%), Query Frame = 0
Query:   38 PPVAPQPKSEGAWVGSVKLRPRRGWAAGSMDERLPRRPAAKSVVCRRIFEAG---LSSPIRAEDEGCSAFPLPSRTRARVARDLGGI 121
            PP+ P+PKS+GA V SVK RPRRG A G  +ERLPRRPAA+SVV +R FE G   +   +  E E     P+       V RD GG+
Sbjct:    3 PPMEPRPKSKGARVESVKPRPRRGRAEGCTEERLPRRPAARSVVYQRAFEGGAGTVGGSVEIE-EATGVAPV------EVGRDEGGV 82          
BLAST of mRNA_Ecto-sp13_S_contig1733.5174.1 vs. uniprot
Match: A0A6H5JNQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ9_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.400e-10
Identity = 52/123 (42.28%), Postives = 58/123 (47.15%), Query Frame = 0
Query:    1 EERLSRRPAARSVAYRRAFEVQVGPGP---KEALWKLSRRPPVAPQPKSEGAWVGSVKLRPRRGWAAGSMDERLPRRPAAKSVVCRRIFEAGLSSPIRAEDEGCSAFPLPSRTRARVARDLGG 120
            EERLSRRPAARSV YRRAFE   G G    K  LW+ S R       +    W      R   G AAG M+ER PRRP  +SVV  R  E G  +       G S       TR   A  +GG
Sbjct:   99 EERLSRRPAARSVVYRRAFEGGAGTGGGSVKIDLWRPSLR-------RRGRGWGRPSPSRGGGGRAAGRMEERPPRRPVVRSVVYWRALEGGAGT------RGGSLEIEEEATRGAPAEVIGG 208          
BLAST of mRNA_Ecto-sp13_S_contig1733.5174.1 vs. uniprot
Match: A0A6H5JIQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ0_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 2.470e-10
Identity = 30/37 (81.08%), Postives = 32/37 (86.49%), Query Frame = 0
Query:   87 EAGLSSPIRAEDEGCSAFPLPSRTRARVARDLGGICA 123
            +AGLSSP+RAE EGCSA PLPSRTRA V RDLGG CA
Sbjct:  201 QAGLSSPVRAEKEGCSASPLPSRTRATVTRDLGGNCA 237          
BLAST of mRNA_Ecto-sp13_S_contig1733.5174.1 vs. uniprot
Match: A0A6H5JP68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP68_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 3.090e-8
Identity = 39/86 (45.35%), Postives = 44/86 (51.16%), Query Frame = 0
Query:   42 PQPKSEGAWVGSVKLRPRRGWAAGSMDERLP-------------------RRPAAKSVVCRRIFEAGLSS---PIRAEDEGCSAFP 105
            PQPKSEGA VGSVK  PR G A GSM+ERLP                   RRPAA+ V+ RR FE G  +    +  E E  S  P
Sbjct:  211 PQPKSEGARVGSVKPEPRMGRAVGSMEERLPLRPVAEEGAGGGLHGGGLLRRPAARIVIYRRAFEGGAETGGGSVEIEKEATSGAP 296          
BLAST of mRNA_Ecto-sp13_S_contig1733.5174.1 vs. uniprot
Match: A0A6H5JP41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP41_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 1.520e-7
Identity = 31/71 (43.66%), Postives = 39/71 (54.93%), Query Frame = 0
Query:   38 PPVAPQPKSEGAWVGSVKLRPRRGWAAGSMDERLPRRPAAKSVVCRRIFEAGLSS---PIRAEDEGCSAFP 105
            PPV P+P  E      V  +PRRG AAGSM+ER PRRP  +SV+  R FE G  +    +  E+E     P
Sbjct:    3 PPVEPRPPPERTRAEPVMPKPRRGRAAGSMEERHPRRPVVRSVLYMRAFEGGARTGGGSVEIEEEATGGDP 73          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1733.5174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FUQ1_ECTSI8.500e-3869.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEJ2_9PHAE2.260e-2943.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMZ2_ECTSI9.560e-2755.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0N7_9PHAE4.510e-1555.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF72_9PHAE3.310e-1249.43Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JNQ9_9PHAE1.400e-1042.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIQ0_9PHAE2.470e-1081.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP68_9PHAE3.090e-845.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP41_9PHAE1.520e-743.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1733contigEcto-sp13_S_contig1733:2060..3013 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1733.5174.1mRNA_Ecto-sp13_S_contig1733.5174.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1733 2060..3056 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1733.5174.1 ID=prot_Ecto-sp13_S_contig1733.5174.1|Name=mRNA_Ecto-sp13_S_contig1733.5174.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=124bp
EERLSRRPAARSVAYRRAFEVQVGPGPKEALWKLSRRPPVAPQPKSEGAW
VGSVKLRPRRGWAAGSMDERLPRRPAAKSVVCRRIFEAGLSSPIRAEDEG
CSAFPLPSRTRARVARDLGGICA*
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