prot_Ecto-sp13_S_contig17323.5172.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig17323.5172.1
Unique Name	prot_Ecto-sp13_S_contig17323.5172.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	275

Homology

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BLAST of mRNA_Ecto-sp13_S_contig17323.5172.1 vs. uniprot
Match: A0A6H5JDW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDW9_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 2.670e-119
Identity = 216/242 (89.26%), Postives = 219/242 (90.50%), Query Frame = 0

Query:   45 NAGAATATASGTPSVLE------------AVSPNVVGTPETTEGGGAMGDTVFINEAVGKPPEVYNDADNSDESIIDVGEEVDMGEEKDWMAAASPMPKTPNAASIGEVFAMTPAAAGHEEPVQDFVGEGGTTEVEQEHSENFGSFSGESSSGADTGALHRYGVYDLAGGGAAAATGTNENASSRGSGGDATTPGVFRSARSILTWKEDDEQEEGDAEREAEEVQALVAEALALVQEANADD 274
            +AGAATATASGTPSVLE            AVSPNVV TPETTEGGGAM DTVFINEAVGK PEVYNDADNSDESIIDVGEEVDM EEK+WMAAASPMP+ PNAASIGEVFAMTP AAGHEEPVQDFVGEGGTT VEQEHSENFGSFSGESSSGADTGALHRYGVYDLAGG AAAATGTNE ASSRGSGGDA T GVFRSARSILTWKEDDEQEEGDAEREAEEVQALVAEALALVQEANADD
Sbjct: 1160 DAGAATATASGTPSVLEVNQGRAGVGLAEAVSPNVVATPETTEGGGAMDDTVFINEAVGKHPEVYNDADNSDESIIDVGEEVDMREEKNWMAAASPMPRMPNAASIGEVFAMTPTAAGHEEPVQDFVGEGGTTAVEQEHSENFGSFSGESSSGADTGALHRYGVYDLAGGEAAAATGTNEYASSRGSGGDAATSGVFRSARSILTWKEDDEQEEGDAEREAEEVQALVAEALALVQEANADD 1401

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BLAST of mRNA_Ecto-sp13_S_contig17323.5172.1 vs. uniprot
Match: D7FSW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSW9_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 8.930e-111
Identity = 181/196 (92.35%), Postives = 184/196 (93.88%), Query Frame = 0

Query:   80 MGDTVFINEAVGKPPEVYNDADNSDESIIDVGEEVDMGEEKDWMAAASPMPKTPNAASIGEVFAMTPAAAGHEEPVQDFVGEGGTTEVEQEHSE-NFGSFSGESSSGADTGALHRYGVYDLAGGGAAAATGTNENASSRGSGGDATTPGVFRSARSILTWKEDDEQEEGDAEREAEEVQALVAEALALVQEANADD 274
            M DTVFINEAVGKPPEVYNDADNSDESIIDVGEE DMG  KDWMAAASP P+TPNAASIGEVFAMTP AAGHEEP+QDFVGEGGT  VEQEHSE +FGSFSGESSSGADTGALHRYGVYDLAGG AAAATGTNE ASSRGSGGDA TPGVFRSARSILTWKEDDEQEEGDAEREAEEVQALVAEALALVQEANADD
Sbjct:    1 MDDTVFINEAVGKPPEVYNDADNSDESIIDVGEEADMGGGKDWMAAASPTPRTPNAASIGEVFAMTPMAAGHEEPMQDFVGEGGTAAVEQEHSEESFGSFSGESSSGADTGALHRYGVYDLAGGEAAAATGTNEYASSRGSGGDAATPGVFRSARSILTWKEDDEQEEGDAEREAEEVQALVAEALALVQEANADD 196

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig17323.5172.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig17323.5172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JDW9_9PHAE	2.670e-119	89.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FSW9_ECTSI	8.930e-111	92.35	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 239..273

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig17323	contig	Ecto-sp13_S_contig17323:2199..3682 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig17323.5172.1	mRNA_Ecto-sp13_S_contig17323.5172.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig17323 2199..3709 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig17323.5172.1 ID=prot_Ecto-sp13_S_contig17323.5172.1|Name=mRNA_Ecto-sp13_S_contig17323.5172.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=275bp
MAAATAAAEADAAAEDAAAKAVEAAVKAEKAAEQAAAARAASRRNAGAAT
ATASGTPSVLEAVSPNVVGTPETTEGGGAMGDTVFINEAVGKPPEVYNDA
DNSDESIIDVGEEVDMGEEKDWMAAASPMPKTPNAASIGEVFAMTPAAAG
HEEPVQDFVGEGGTTEVEQEHSENFGSFSGESSSGADTGALHRYGVYDLA
GGGAAAATGTNENASSRGSGGDATTPGVFRSARSILTWKEDDEQEEGDAE
REAEEVQALVAEALALVQEANADD*