prot_Ecto-sp13_S_contig1729.5152.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1729.5152.1
Unique Nameprot_Ecto-sp13_S_contig1729.5152.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length88
Homology
BLAST of mRNA_Ecto-sp13_S_contig1729.5152.1 vs. uniprot
Match: D8LFP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP2_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 2.030e-21
Identity = 51/62 (82.26%), Postives = 54/62 (87.10%), Query Frame = 0
Query:    1 METEVILDDVNAVFKPSNTTLVLGAPGSGKSLGTNQQSTLLKALAGLLKHDAGHMKKGSVTY 62
            +ET+VILDDVNAVFKPS TTLVLGAPGSGKS       TLLKALAGLLKHDAGH+KKGSVTY
Sbjct:   83 VETKVILDDVNAVFKPSTTTLVLGAPGSGKS-------TLLKALAGLLKHDAGHVKKGSVTY 137          
BLAST of mRNA_Ecto-sp13_S_contig1729.5152.1 vs. uniprot
Match: D8LFN4_ECTSI (Pleiotropic drug resistance transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN4_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 2.450e-20
Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 0
Query:    1 METEVILDDVNAVFKPSNTTLVLGAPGSGKSLGTNQQSTLLKALAGLLKHDAGHMKKGSVTY 62
            MET+VILDDVNAVFKPS TTLVLGAPGSGKS       TLLK+LAGLLKHDAGH+ +GSVTY
Sbjct:  179 METKVILDDVNAVFKPSTTTLVLGAPGSGKS-------TLLKSLAGLLKHDAGHVNQGSVTY 233          
BLAST of mRNA_Ecto-sp13_S_contig1729.5152.1 vs. uniprot
Match: D7FQM9_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM9_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 8.370e-15
Identity = 41/62 (66.13%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    1 METEVILDDVNAVFKPSNTTLVLGAPGSGKSLGTNQQSTLLKALAGLLKHDAGHMKKGSVTY 62
            ME + ILDDVNAVFKPS+TTLVLG PG GKS       TLLKA+AGLLK D GH+ +G +TY
Sbjct:   94 MEAKTILDDVNAVFKPSSTTLVLGPPGCGKS-------TLLKAVAGLLKEDKGHVVEGRMTY 148          
BLAST of mRNA_Ecto-sp13_S_contig1729.5152.1 vs. uniprot
Match: A0A4D9BY97_SALSN (ABC transporter domain-containing protein n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9BY97_SALSN)

HSP 1 Score: 51.6 bits (122), Expect = 1.390e-5
Identity = 29/58 (50.00%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    6 ILDDVNAVFKPSNTTLVLGAPGSGKSLGTNQQSTLLKALAGLLKHDAGHMKKGSVTYC 63
            IL+DV+ + +PS  TL+LG PGSGK++       LLKALAG L+ D     KG +TYC
Sbjct:  196 ILNDVSGIVRPSRMTLLLGPPGSGKTI-------LLKALAGKLEEDL--RVKGRITYC 244          
BLAST of mRNA_Ecto-sp13_S_contig1729.5152.1 vs. uniprot
Match: A0A8E6YIE3_SALMI (ABC transporter n=1 Tax=Salvia miltiorrhiza TaxID=226208 RepID=A0A8E6YIE3_SALMI)

HSP 1 Score: 50.4 bits (119), Expect = 3.600e-5
Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    6 ILDDVNAVFKPSNTTLVLGAPGSGKSLGTNQQSTLLKALAGLLKHDAGHMKKGSVTYC 63
            IL DV+ + +P+  TL+LG PGSGK++       LLKALAG L+ D   + KG +TYC
Sbjct:  194 ILHDVSGIVRPARMTLLLGPPGSGKTI-------LLKALAGKLEEDL-RVCKGRITYC 243          
BLAST of mRNA_Ecto-sp13_S_contig1729.5152.1 vs. uniprot
Match: A0A022PTV0_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022PTV0_ERYGU)

HSP 1 Score: 50.1 bits (118), Expect = 4.920e-5
Identity = 29/58 (50.00%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    6 ILDDVNAVFKPSNTTLVLGAPGSGKSLGTNQQSTLLKALAGLLKHDAGHMKKGSVTYC 63
            IL D++ V KPS  TL+LG PGSGK++       LLKALAG L +D      G++TYC
Sbjct:  193 ILHDISGVVKPSRMTLLLGPPGSGKTI-------LLKALAGKLDNDL--RVDGNITYC 241          
BLAST of mRNA_Ecto-sp13_S_contig1729.5152.1 vs. uniprot
Match: A0A7U4LFU6_9SPHN (ABC transporter n=1 Tax=Sphingomonas hengshuiensis TaxID=1609977 RepID=A0A7U4LFU6_9SPHN)

HSP 1 Score: 49.3 bits (116), Expect = 7.390e-5
Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 0
Query:    6 ILDDVNAVFKPSNTTLVLGAPGSGKSLGTNQQSTLLKALAGLLKHDAGHMKKGS 59
            +L  V AVF+P   T +LG  GSGKS       TL+KALAGL+  D GH++ G+
Sbjct:   17 VLHGVGAVFRPGRVTAILGPNGSGKS-------TLVKALAGLIDADTGHVRLGN 63          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1729.5152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LFP2_ECTSI2.030e-2182.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LFN4_ECTSI2.450e-2079.03Pleiotropic drug resistance transporter n=1 Tax=Ec... [more]
D7FQM9_ECTSI8.370e-1566.13ABC transporter domain-containing protein n=1 Tax=... [more]
A0A4D9BY97_SALSN1.390e-550.00ABC transporter domain-containing protein n=1 Tax=... [more]
A0A8E6YIE3_SALMI3.600e-548.28ABC transporter n=1 Tax=Salvia miltiorrhiza TaxID=... [more]
A0A022PTV0_ERYGU4.920e-550.00Uncharacterized protein n=1 Tax=Erythranthe guttat... [more]
A0A7U4LFU6_9SPHN7.390e-548.15ABC transporter n=1 Tax=Sphingomonas hengshuiensis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..77
e-value: 5.8E-9
score: 37.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1729contigEcto-sp13_S_contig1729:13381..14509 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1729.5152.1mRNA_Ecto-sp13_S_contig1729.5152.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1729 13376..15490 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1729.5152.1 ID=prot_Ecto-sp13_S_contig1729.5152.1|Name=mRNA_Ecto-sp13_S_contig1729.5152.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=88bp
METEVILDDVNAVFKPSNTTLVLGAPGSGKSLGTNQQSTLLKALAGLLKH
DAGHMKKGSVTYCLCLQVQRGHQGVWNFFSAEGGGFS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase