prot_Ecto-sp13_S_contig1727.5139.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1727.5139.1
Unique Nameprot_Ecto-sp13_S_contig1727.5139.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length488
Homology
BLAST of mRNA_Ecto-sp13_S_contig1727.5139.1 vs. uniprot
Match: A0A6H5KU27_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU27_9PHAE)

HSP 1 Score: 701 bits (1808), Expect = 2.290e-250
Identity = 417/489 (85.28%), Postives = 427/489 (87.32%), Query Frame = 0
Query:    1 MTMTDRTEEFHGAVGAFRPTVTVVNNSGEAAAIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLQKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISLLQRHADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGGKAASVLPFPSGNGGTR-GGGTGGSSWPQKSVVPSPWSAEGGRNGNGSNDSTGVGKGGYDAVGSMPRATETAXXXXXXXXXXXDSNGGFRAGPHTAPPFGGANGYVP-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXRATGLRKRPGREDGDDAEEESRRAAWQVQVQDDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR 487
            MTMTDRT+EFHGAV AFRPTVT VNNSGEAA IRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRL+KLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDIS LQR+ADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDAL+LRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSSG XXXXXXXXXXX      XXXXXXXXXXX          +GGKAASVLPFPSGNGGTR GGGTGGSSWPQKS VP+PWSAEGGRNGNG+N STGVGKGGYDAVG+MPRATE A XXXXXXX   DSNGGFRAGPHTAP FG ANGYVP +                            RATGLRKRPGREDG DAEEESRRAAWQVQVQ+DSKTRVDESHKVEKMIGDLG MFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR
Sbjct:    1 MTMTDRTKEFHGAVSAFRPTVTAVNNSGEAALIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQRYADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALMLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSSGXXXXXXXXXXXXTANLPSXXXXXXXXXXXDNKGHKHGPRKGGKAASVLPFPSGNGGTRAGGGTGGSSWPQKSAVPAPWSAEGGRNGNGNNCSTGVGKGGYDAVGAMPRATEPAAXXXXXXXRT-DSNGGFRAGPHTAPTFGSANGYVPPAAGGGSGRAHAAAPPGFPPLRTEASRGGGRATGLRKRPGREDGGDAEEESRRAAWQVQVQEDSKTRVDESHKVEKMIGDLGHMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR 488          
BLAST of mRNA_Ecto-sp13_S_contig1727.5139.1 vs. uniprot
Match: A0A835Z5V3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V3_9STRA)

HSP 1 Score: 119 bits (297), Expect = 8.130e-28
Identity = 70/184 (38.04%), Postives = 111/184 (60.33%), Query Frame = 0
Query:    3 MTDRTEEFHGAVGAFRPTVTVVNNSGEAAAIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLQKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISLLQRHADG--GTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLF 184
            M DRT EF G +        V++        R Q +    + ++F +  +++A+  EGT++LI +L +LVGRKG SN+P  EI+DV +LF+GDM  +Q+++S LQ   DG  G RG+P   SQR  H  +++  L++ AQE   AF+ AL  R AV ++ N+R++ +S +R V  + Q++ PLF
Sbjct:    1 MIDRTAEFQGCI-------RVLHQHDGRPDQRPQYEAP--QPTDFTKAVSALALSLEGTAKLIEQLMRLVGRKGTSNDPTMEITDVSRLFKGDMDAVQQELSALQAFIDGRSGKRGAPAPGSQRHKHSLYMLDALKQLAQEQVAAFQAALKQRNAVMRELNDRRKVYSTTRSVGLSVQMNSPLF 175          
BLAST of mRNA_Ecto-sp13_S_contig1727.5139.1 vs. uniprot
Match: A0A835ZFW2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW2_9STRA)

HSP 1 Score: 101 bits (252), Expect = 9.690e-23
Identity = 49/72 (68.06%), Postives = 59/72 (81.94%), Query Frame = 0
Query:  411 MIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVF 482
            MIG+LG MFS+FS +VAAQEE V+HIEDDVE AH FA +G AHL++YYQ  SGNRGII+KV I+L   +WVF
Sbjct:    1 MIGELGHMFSKFSALVAAQEETVVHIEDDVEMAHGFAVDGHAHLSRYYQTISGNRGIIVKVLILLAFFVWVF 72          
BLAST of mRNA_Ecto-sp13_S_contig1727.5139.1 vs. uniprot
Match: A0A7S2XXW7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXW7_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.080e-14
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 0
Query:  392 VQVQDDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR 487
             ++Q  SK RV+E+  +E  I +   MFS+ +TMVA Q E+V  I+DD+E A      G   L +YY I SGNRG+IIK+FI L+V I++F+ L +
Sbjct:   10 AELQTSSKQRVEEARSIEATISEFATMFSKMATMVAQQGELVTRIDDDMELALGNVSAGHTELTRYYSIISGNRGLIIKIFITLMVFIFLFVVLFK 105          
BLAST of mRNA_Ecto-sp13_S_contig1727.5139.1 vs. uniprot
Match: I2CQ48_NANGC (t-SNARE coiled-coil homology domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ48_NANGC)

HSP 1 Score: 77.0 bits (188), Expect = 1.770e-13
Identity = 44/88 (50.00%), Postives = 60/88 (68.18%), Query Frame = 0
Query:  395 QDDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVF 482
            Q D+ +R+ E+  VEK I +LGQ FSR + +VAAQ EVVM I+DD+EAA    ++G A +  Y +I  GNR +I KVF +L+V I VF
Sbjct:   25 QRDTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVMRIDDDMEAALEDVQKGHAEMVNYLRIVKGNRAVIFKVFALLLVFIVVF 112          
BLAST of mRNA_Ecto-sp13_S_contig1727.5139.1 vs. uniprot
Match: F0Y6L6_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6L6_AURAN)

HSP 1 Score: 76.3 bits (186), Expect = 1.780e-13
Identity = 41/85 (48.24%), Postives = 57/85 (67.06%), Query Frame = 0
Query:  398 SKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVF 482
            S+ R+D +H +EK IG LG++FSRFS++VA Q EVV  ++DDVE A    E G A L K  ++  GNR + +KVF +LI  I +F
Sbjct:    6 SRRRLDTAHNIEKEIGKLGEVFSRFSSLVAQQAEVVERLDDDVEGALGEVEMGHAELLKAQEVLRGNRALFLKVFAVLIALIVLF 90          
BLAST of mRNA_Ecto-sp13_S_contig1727.5139.1 vs. uniprot
Match: A0A7S3H3X9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3X9_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.940e-11
Identity = 36/77 (46.75%), Postives = 54/77 (70.13%), Query Frame = 0
Query:  400 TRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLI 476
            +R +    V+K IG+L QMFS+ + +V AQEE++  I+ D+++     +EGQ HL KY+Q  S NRG+IIKVF++LI
Sbjct:  216 SRAEAVQNVQKTIGELAQMFSKMAVLVTAQEEMIQRIDSDLDSTITNVDEGQQHLLKYFQYISSNRGLIIKVFLILI 292          
BLAST of mRNA_Ecto-sp13_S_contig1727.5139.1 vs. uniprot
Match: A0A4D9CWV4_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV4_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.270e-10
Identity = 42/88 (47.73%), Postives = 59/88 (67.05%), Query Frame = 0
Query:  395 QDDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVF 482
            Q D+ +R+ E+  VEK I +LGQ FSR + +VAAQ EVV+ I+DD+EAA    ++G   +  Y +I  GNR +I KVF +L+V I VF
Sbjct:  278 QRDTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVVRIDDDMEAALEDVQKGHVEMVNYLRIVKGNRAVIFKVFALLLVFIVVF 365          
BLAST of mRNA_Ecto-sp13_S_contig1727.5139.1 vs. uniprot
Match: A0A485LIS1_9STRA (Aste57867_21905 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIS1_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.030e-10
Identity = 41/118 (34.75%), Postives = 73/118 (61.86%), Query Frame = 0
Query:  366 ATGLRKRPGREDGDDAEEESRRAAWQVQVQDDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFL 483
            A G+R+RP       +    ++    +     +++R++++  VE MIG++G M+SR + ++A QEE++  IEDD+  AH+  E G   L KY+   S NR +I+K+F++L+V I++FL
Sbjct:  208 AAGMRRRPFMNGATGSSYAQQQQQQNLMRHRTAQSRLNDAQNVEAMIGEIGGMYSRMTGLLANQEEMLGRIEDDMTTAHSNVEGGYEELMKYFSTVSSNRSLILKIFLVLLVFIYLFL 325          
BLAST of mRNA_Ecto-sp13_S_contig1727.5139.1 vs. uniprot
Match: F8NEK7_SERL9 (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Serpula lacrymans var. lacrymans TaxID=341189 RepID=F8NEK7_SERL9)

HSP 1 Score: 72.4 bits (176), Expect = 4.240e-10
Identity = 51/177 (28.81%), Postives = 87/177 (49.15%), Query Frame = 0
Query:    1 MTMTDRTEEFHGAVGAFRPTVTVVNNSGEAAAIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLQKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISLLQRHA-DGGTRGSPPANSQRQM--HCAFIVTTLRRSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVA 174
            M + DRT+EFH  V + R          E      QT    R  S+F ++AA++      T+  +G+L +L  RK   ++   EIS++  + + D+AG+ K I++LQ +     T GS  ++  +Q+  H   +V  L+    + + +F+D L LR    K+  +R  KF H+   A
Sbjct:    1 MGIQDRTDEFHTCVESIRHRSAFPPRGAEVKQRLLQTYEKSRAKSDFSRMAAAIGKDISSTTIKLGKLAQLAKRKTLFDDRPVEISELTFIIKQDIAGINKQIAVLQAYIKQKNTPGSQKSSEGKQLDEHTHNVVMMLQNKLADTSMSFKDVLELRTQNMKEARDRTEKFMHTTSSA 177          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1727.5139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU27_9PHAE2.290e-25085.28t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835Z5V3_9STRA8.130e-2838.04Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZFW2_9STRA9.690e-2368.06t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S2XXW7_9STRA1.080e-1444.79Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
I2CQ48_NANGC1.770e-1350.00t-SNARE coiled-coil homology domain-containing pro... [more]
F0Y6L6_AURAN1.780e-1348.24t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S3H3X9_9STRA2.940e-1146.75Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A4D9CWV4_9STRA1.270e-1047.73t-SNARE coiled-coil homology domain-containing pro... [more]
A0A485LIS1_9STRA2.030e-1034.75Aste57867_21905 protein n=1 Tax=Aphanomyces stella... [more]
F8NEK7_SERL94.240e-1028.81t-SNARE coiled-coil homology domain-containing pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 390..457
e-value: 3.3E-7
score: 39.9
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 395..457
score: 10.835
NoneNo IPR availableGENE3D1.20.5.110coord: 385..486
e-value: 5.9E-14
score: 53.5
NoneNo IPR availablePANTHERPTHR19957:SF3SYNTAXIN-5coord: 3..183
coord: 373..483
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 3..183
coord: 373..483
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..466
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 487..487
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 467..486
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 392..458
NoneNo IPR availableTMHMMTMhelixcoord: 466..485
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 45..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1727contigEcto-sp13_S_contig1727:9740..14509 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1727.5139.1mRNA_Ecto-sp13_S_contig1727.5139.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1727 8797..14509 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1727.5139.1 ID=prot_Ecto-sp13_S_contig1727.5139.1|Name=mRNA_Ecto-sp13_S_contig1727.5139.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=488bp
MTMTDRTEEFHGAVGAFRPTVTVVNNSGEAAAIRAQTDLGYRKTSEFLQL
AASVAVGFEGTSRLIGRLQKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQ
KDISLLQRHADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDAL
LLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSSGAGAGGGARRRRP
TANPPSPPPPLPDEDDEDNKGHKHGPGRGGKAASVLPFPSGNGGTRGGGT
GGSSWPQKSVVPSPWSAEGGRNGNGSNDSTGVGKGGYDAVGSMPRATETA
AAAAAAAAARTDSNGGFRAGPHTAPPFGGANGYVPSAAGGGSGRHAAAPP
EFPPPPTGASRGGGRATGLRKRPGREDGDDAEEESRRAAWQVQVQDDSKT
RVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEG
QAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR010989SNARE