prot_Ecto-sp13_S_contig17161.5079.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17161.5079.1
Unique Nameprot_Ecto-sp13_S_contig17161.5079.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length331
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17161.5079.1 vs. uniprot
Match: D7G702_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G702_ECTSI)

HSP 1 Score: 428 bits (1101), Expect = 1.490e-147
Identity = 235/267 (88.01%), Postives = 240/267 (89.89%), Query Frame = 0 
Query:   64 GDIEIPQLRQGENAELRSHPSPRGSASENISFGDRFASMEDGGVNFEDEFDPILASIRKPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGERGRDANDAGRPSTGSSLAAGFLSMLPGDMRAKAGEVMAQSSARISESANAFRSALGPGGAAQSATDKSKRRQLDQTCRGVDGGDHELEEGRGGEDDVRLMNVNEVLSEEERQQLASFAGGAGAGRFCGWRRLRKYIPVFAGIGLLGLLYLWRWTTLLVGKDTANEVKVLGSERM 330
            GDIEIPQLRQ +NAELRSHPSPRGS SE+ SFGDRFASMEDGGVNFEDEFDPILASIRKPQ                  XXXXXXXXX SG ERGR+ANDAGRP+TGSSLAAGFLSMLPGDMRAKAGEVMAQSSARISESANAFRSALGPGGAAQSATDKSKRRQ D TCRGVDGGDHELEEGRG EDDVRLMNVNEVLSEEERQQLASFAGGAGAGRFCGWRRLRKY+PVF GIGLLGLLYLWRWTTLLVGKDTANEVKVLGSERM
Sbjct:   90 GDIEIPQLRQEDNAELRSHPSPRGSTSEHSSFGDRFASMEDGGVNFEDEFDPILASIRKPQQPPASTTAAASSMSPRGRXXXXXXXXXPSGRERGREANDAGRPTTGSSLAAGFLSMLPGDMRAKAGEVMAQSSARISESANAFRSALGPGGAAQSATDKSKRRQSDHTCRGVDGGDHELEEGRGDEDDVRLMNVNEVLSEEERQQLASFAGGAGAGRFCGWRRLRKYVPVFVGIGLLGLLYLWRWTTLLVGKDTANEVKVLGSERM 356
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17161.5079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G702_ECTSI1.490e-14788.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..290
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 291..307
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 308..330
NoneNo IPR availableTMHMMTMhelixcoord: 291..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17161contigEcto-sp13_S_contig17161:671..2611 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17161.5079.1mRNA_Ecto-sp13_S_contig17161.5079.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17161 671..2611 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17161.5079.1 ID=prot_Ecto-sp13_S_contig17161.5079.1|Name=mRNA_Ecto-sp13_S_contig17161.5079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=331bp
LSRLLEEQEREERSKEESLRLLRSSEETTDASSSQDSPGTSTTAPTAGRS
EREANSLGSVDTLGDIEIPQLRQGENAELRSHPSPRGSASENISFGDRFA
SMEDGGVNFEDEFDPILASIRKPQPPPASTTAAASSMSPRGRLAAATAAA
PPSGGERGRDANDAGRPSTGSSLAAGFLSMLPGDMRAKAGEVMAQSSARI
SESANAFRSALGPGGAAQSATDKSKRRQLDQTCRGVDGGDHELEEGRGGE
DDVRLMNVNEVLSEEERQQLASFAGGAGAGRFCGWRRLRKYIPVFAGIGL
LGLLYLWRWTTLLVGKDTANEVKVLGSERM*
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