prot_Ecto-sp13_S_contig1715.5073.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1715.5073.1
Unique Nameprot_Ecto-sp13_S_contig1715.5073.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length136
Homology
BLAST of mRNA_Ecto-sp13_S_contig1715.5073.1 vs. uniprot
Match: A0A6H5KWU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU5_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 6.450e-44
Identity = 72/82 (87.80%), Postives = 79/82 (96.34%), Query Frame = 0
Query:   48 YDDPCLVCGGLDNPEKALLCDGCDGCYHMYCLTPPLKRAPKGDWLCPKCVKKAVDASGDDDVPASASTTGAAMKGKGASSSK 129
            YDDPCLVCGGLDNP+KALLCDGCDGCYH+YCL+PPLKRAPKGDWLCPKCV+K +DASGDDDVPASASTTG A KGKG+S+SK
Sbjct: 1151 YDDPCLVCGGLDNPDKALLCDGCDGCYHVYCLSPPLKRAPKGDWLCPKCVEKVLDASGDDDVPASASTTGPARKGKGSSASK 1232          
BLAST of mRNA_Ecto-sp13_S_contig1715.5073.1 vs. uniprot
Match: A0A7S1JGF3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JGF3_9EUGL)

HSP 1 Score: 84.7 bits (208), Expect = 3.190e-18
Identity = 29/51 (56.86%), Postives = 40/51 (78.43%), Query Frame = 0
Query:   49 DDPCLVCGGLDNPEKALLCDGCDGCYHMYCLTPPLKRAPKGDWLCPKCVKK 99
            ++PC++CGG +  E+++LCDGCDG YH++CL PPLK  P GDW CP+C  K
Sbjct:   30 NEPCVICGGKEEAERSVLCDGCDGAYHIFCLRPPLKTIPDGDWFCPQCQAK 80          
BLAST of mRNA_Ecto-sp13_S_contig1715.5073.1 vs. uniprot
Match: A0A7S1CM23_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CM23_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 7.260e-15
Identity = 31/50 (62.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:   49 DDPCLVCGGLDNPEKALLCDGCDGCYHMYCLTPPLKRAPKGDWLCPKCVK 98
            D  C VCGGL  P K LLCD CDG YH++CL PPLK  P GDW CP C +
Sbjct:  416 DPGCRVCGGLHKPSKVLLCDHCDGEYHLFCLKPPLKAVPAGDWACPDCTE 465          
BLAST of mRNA_Ecto-sp13_S_contig1715.5073.1 vs. uniprot
Match: A0A673HEG1_9TELE ([Histone H3]-trimethyl-L-lysine(4) demethylase n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673HEG1_9TELE)

HSP 1 Score: 79.3 bits (194), Expect = 1.480e-14
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 0
Query:   52 CLVCGGLDNPEKALLCDGCDGCYHMYCLTPPLKRAPKGDWLCPKCV 97
            CLVCGG D+ ++ LLCDGCD  YH +CL PPL   PKGDW CPKC+
Sbjct:  244 CLVCGGGDDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCL 289          
BLAST of mRNA_Ecto-sp13_S_contig1715.5073.1 vs. uniprot
Match: A0A673HDD9_9TELE ([Histone H3]-trimethyl-L-lysine(4) demethylase n=6 Tax=Cyprininae TaxID=2743694 RepID=A0A673HDD9_9TELE)

HSP 1 Score: 79.3 bits (194), Expect = 1.480e-14
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 0
Query:   52 CLVCGGLDNPEKALLCDGCDGCYHMYCLTPPLKRAPKGDWLCPKCV 97
            CLVCGG D+ ++ LLCDGCD  YH +CL PPL   PKGDW CPKC+
Sbjct:  239 CLVCGGGDDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCL 284          
BLAST of mRNA_Ecto-sp13_S_contig1715.5073.1 vs. uniprot
Match: A0A673HE83_9TELE ([Histone H3]-trimethyl-L-lysine(4) demethylase n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673HE83_9TELE)

HSP 1 Score: 79.3 bits (194), Expect = 1.480e-14
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 0
Query:   52 CLVCGGLDNPEKALLCDGCDGCYHMYCLTPPLKRAPKGDWLCPKCV 97
            CLVCGG D+ ++ LLCDGCD  YH +CL PPL   PKGDW CPKC+
Sbjct:  296 CLVCGGGDDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCL 341          
BLAST of mRNA_Ecto-sp13_S_contig1715.5073.1 vs. uniprot
Match: A0A673HE89_9TELE ([Histone H3]-trimethyl-L-lysine(4) demethylase n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673HE89_9TELE)

HSP 1 Score: 79.3 bits (194), Expect = 1.480e-14
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 0
Query:   52 CLVCGGLDNPEKALLCDGCDGCYHMYCLTPPLKRAPKGDWLCPKCV 97
            CLVCGG D+ ++ LLCDGCD  YH +CL PPL   PKGDW CPKC+
Sbjct:  296 CLVCGGGDDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCL 341          
BLAST of mRNA_Ecto-sp13_S_contig1715.5073.1 vs. uniprot
Match: A0A673HE77_9TELE ([Histone H3]-trimethyl-L-lysine(4) demethylase n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673HE77_9TELE)

HSP 1 Score: 79.3 bits (194), Expect = 1.480e-14
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 0
Query:   52 CLVCGGLDNPEKALLCDGCDGCYHMYCLTPPLKRAPKGDWLCPKCV 97
            CLVCGG D+ ++ LLCDGCD  YH +CL PPL   PKGDW CPKC+
Sbjct:  282 CLVCGGGDDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCL 327          
BLAST of mRNA_Ecto-sp13_S_contig1715.5073.1 vs. uniprot
Match: A0A835SC30_9CHLO (PHD-type domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SC30_9CHLO)

HSP 1 Score: 78.6 bits (192), Expect = 2.830e-14
Identity = 37/58 (63.79%), Postives = 39/58 (67.24%), Query Frame = 0
Query:   48 YDDP-CLVCGGLDNPEKALLCDGCDGCYHMYCLTPPLKRAPKGDWLCPKCVKKAVDAS 104
            YDD  C VCGG D+P+  LLCD CDG YHM CL PPLK  P GDW CP C   A DAS
Sbjct: 1618 YDDTLCAVCGGGDDPDTILLCDTCDGGYHMGCLDPPLKDIPDGDWHCPNCT--AADAS 1673          
BLAST of mRNA_Ecto-sp13_S_contig1715.5073.1 vs. uniprot
Match: A0A8J4U663_CLAMG ([Histone H3]-trimethyl-L-lysine(4) demethylase (Fragment) n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4U663_CLAMG)

HSP 1 Score: 77.8 bits (190), Expect = 5.260e-14
Identity = 30/46 (65.22%), Postives = 34/46 (73.91%), Query Frame = 0
Query:   52 CLVCGGLDNPEKALLCDGCDGCYHMYCLTPPLKRAPKGDWLCPKCV 97
            CL CGG D+ +K LLCDGCD  YH YCL PPL   PKGDW CP+C+
Sbjct:  919 CLGCGGGDDEDKLLLCDGCDDSYHTYCLIPPLHDVPKGDWRCPECL 964          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1715.5073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWU5_9PHAE6.450e-4487.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1JGF3_9EUGL3.190e-1856.86Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A7S1CM23_9STRA7.260e-1562.00Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A673HEG1_9TELE1.480e-1465.22[Histone H3]-trimethyl-L-lysine(4) demethylase n=1... [more]
A0A673HDD9_9TELE1.480e-1465.22[Histone H3]-trimethyl-L-lysine(4) demethylase n=6... [more]
A0A673HE83_9TELE1.480e-1465.22[Histone H3]-trimethyl-L-lysine(4) demethylase n=1... [more]
A0A673HE89_9TELE1.480e-1465.22[Histone H3]-trimethyl-L-lysine(4) demethylase n=1... [more]
A0A673HE77_9TELE1.480e-1465.22[Histone H3]-trimethyl-L-lysine(4) demethylase n=1... [more]
A0A835SC30_9CHLO2.830e-1463.79PHD-type domain-containing protein n=1 Tax=Chlamyd... [more]
A0A8J4U663_CLAMG5.260e-1465.22[Histone H3]-trimethyl-L-lysine(4) demethylase (Fr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 51..97
e-value: 2.9E-11
score: 53.4
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 52..98
e-value: 2.7E-13
score: 49.6
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 49..99
score: 9.953
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 34..121
e-value: 1.8E-21
score: 77.5
NoneNo IPR availablePANTHERPTHR47162:SF3coord: 49..117
NoneNo IPR availablePANTHERPTHR47162FAMILY NOT NAMEDcoord: 49..117
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 52..96
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 41..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1715contigEcto-sp13_S_contig1715:12461..13235 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1715.5073.1mRNA_Ecto-sp13_S_contig1715.5073.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1715 12461..13235 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1715.5073.1 ID=prot_Ecto-sp13_S_contig1715.5073.1|Name=mRNA_Ecto-sp13_S_contig1715.5073.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=136bp
GGVKEEIGKGKRQKKASEDDDEKPAKKIKEESGAGGSAEDGSSSEEEYDD
PCLVCGGLDNPEKALLCDGCDGCYHMYCLTPPLKRAPKGDWLCPKCVKKA
VDASGDDDVPASASTTGAAMKGKGASSSKATAKGAP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD